Rv0677c - c.-621G>A
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
141 Sensitive
3 RR-TB
15 HR-TB
22 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 198 |
| lineage4.4.2 | 6 |
| lineage1.1.3.1;lineage2.2.1 | 3 |
| lineage1.1.2;lineage1.1.3.1 | 1 |
| lineage1.1.3.1;lineage3.1 | 1 |
| lineage1.1.3.1;lineage4.7 | 2 |
| lineage1.1.2;lineage1.1.3.1;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 212 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21732381 | Sensitive | lineage1.1.3.1 | None | SRR6797457 | MDR-TB | lineage1.1.3.1 | None | SRR6797739 | Sensitive | lineage1.1.3.1 | None | ERR4796637 | Sensitive | lineage1.1.3.1 | in | SRR28044533 | Sensitive | lineage1.1.3.1 | None | SRR16058045 | MDR-TB | lineage1.1.3.1 | None | ERR7902605 | Sensitive | lineage1.1.3.1 | None | SRR12882559 | HR-TB | lineage1.1.3.1 | None | SRR6650194 | Sensitive | lineage1.1.3.1 | None | SRR6797273 | Sensitive | lineage1.1.3.1 | None | SRR6797517 | Sensitive | lineage1.1.3.1 | None | SRR6797523 | Sensitive | lineage1.1.3.1 | None | SRR6797859 | Other | lineage1.1.3.1 | None | SRR16370295 | Sensitive | lineage1.1.3.1 | None | SRR28409710 | Other | lineage1.1.3.1 | None | SRR21676421 | Sensitive | lineage1.1.3.1 | None | SRR21710669 | Other | lineage1.1.3.1 | None | SRR21710716 | Sensitive | lineage1.1.3.1 | None | SRR29017206 | MDR-TB | lineage1.1.3.1 | None | SRR29053045 | Sensitive | lineage1.1.3.1 | None | SRR29053064 | Sensitive | lineage1.1.3.1 | None | ERR4797853 | Sensitive | lineage1.1.3.1 | in | ERR4553778 | MDR-TB | lineage1.1.3.1 | None | ERR3275623 | Sensitive | lineage1.1.3.1 | nl | SRR26112311 | Sensitive | lineage1.1.3.1 | None | SRR15522851 | Sensitive | lineage1.1.3.1 | None | DRR188576 | Sensitive | lineage4.4.2 | None | SRR6650152 | Sensitive | lineage1.1.3.1 | None | SRR25827581 | Pre-XDR-TB | lineage1.1.3.1;lineage2.2.1 | None | SRR28860166 | Sensitive | lineage1.1.3.1 | None | SRR28044322 | Sensitive | lineage1.1.3.1 | None | SRR29017450 | MDR-TB | lineage1.1.3.1 | None | SRR6650208 | Sensitive | lineage1.1.3.1 | None | SRR6797290 | Sensitive | lineage1.1.3.1 | None | ERR2512849 | Other | lineage1.1.3.1 | None | SRR1011507 | Sensitive | lineage1.1.3.1 | None | SRR6797808 | Sensitive | lineage1.1.3.1 | None | ERR230020 | Sensitive | lineage1.1.3.1 | None | SRR28044498 | Sensitive | lineage1.1.3.1 | None | SRR28044299 | RR-TB | lineage1.1.3.1 | None | SRR28044453 | Sensitive | lineage1.1.3.1 | None | SRR28046207 | Sensitive | lineage1.1.3.1 | None | SRR6046691 | Sensitive | lineage1.1.3.1 | None | SRR26112003 | Sensitive | lineage1.1.3.1 | None | SRR28045666 | Sensitive | lineage1.1.3.1 | None | ERR13252768 | Sensitive | lineage4.4.2 | None | SRR22249792 | Sensitive | lineage1.1.3.1 | None | ERR4798258 | Sensitive | lineage1.1.3.1 | in | SRR24799284 | Sensitive | lineage1.1.3.1 | None | SRR18149481 | Sensitive | lineage1.1.3.1 | None | ERR4799499 | Sensitive | lineage1.1.3.1 | in | SRR6650309 | Sensitive | lineage1.1.3.1 | None | ERR4799122 | Sensitive | lineage1.1.3.1 | in | SRR7070310 | Other | lineage1.1.3.1 | None | SRR28045193 | Sensitive | lineage1.1.3.1 | None | ERR4799120 | Sensitive | lineage1.1.3.1 | in | SRR29016842 | MDR-TB | lineage1.1.3.1 | None | SRR1019182 | Sensitive | lineage1.1.3.1 | None | SRR29017628 | MDR-TB | lineage1.1.3.1 | None | SRR6797643 | Sensitive | lineage1.1.3.1 | None | ERR752166 | Sensitive | lineage1.1.3.1 | th | ERR751991 | Sensitive | lineage1.1.3.1 | th | ERR1023380 | Sensitive | lineage1.1.3.1 | None | SRR28045176 | Sensitive | lineage1.1.3.1 | None | SRR28044908 | Sensitive | lineage1.1.3.1 | None | SRR6797362 | Sensitive | lineage1.1.3.1 | None | ERR4814294 | Sensitive | lineage1.1.3.1 | gb | ERR4818927 | Sensitive | lineage1.1.3.1 | gb | ERR2513444 | Other | lineage1.1.3.1 | gb | SRR6045338 | Other | lineage1.1.3.1 | gb | SRR6650165 | Sensitive | lineage1.1.3.1 | None | SRR6797320 | Sensitive | lineage1.1.3.1 | None | SRR28859961 | Sensitive | lineage1.1.3.1 | None | SRR28860083 | Sensitive | lineage1.1.3.1 | None | SRR28859859 | Sensitive | lineage1.1.3.1 | None | ERR2517287 | Sensitive | lineage1.1.3.1 | nl | SRR26112045 | Sensitive | lineage1.1.3.1 | None | SRR21689989 | Sensitive | lineage1.1.3.1 | None | SRR14270077 | Sensitive | lineage1.1.3.1 | None | SRR20969526 | Sensitive | lineage4.4.2 | None | SRR26112667 | Sensitive | lineage1.1.3.1 | None | ERR13291979 | Other | lineage1.1.3.1 | None | ERR13292046 | Other | lineage1.1.3.1 | None | ERR13292072 | Sensitive | lineage1.1.3.1 | None | SRR6650304 | Sensitive | lineage1.1.3.1 | None | SRR6797489 | Sensitive | lineage1.1.3.1 | None | SRR6797664 | Sensitive | lineage1.1.3.1 | None | SRR28046222 | Sensitive | lineage1.1.2;lineage1.1.3.1 | None | SRR18213910 | HR-TB | lineage1.1.3.1 | None | SRR21711109 | Sensitive | lineage1.1.3.1 | None | SRR21736374 | Sensitive | lineage1.1.3.1 | None | SRR6797458 | MDR-TB | lineage1.1.3.1 | None | SRR16370649 | HR-TB | lineage1.1.3.1 | None | ERR4553843 | HR-TB | lineage1.1.3.1 | None | SRR6650317 | Sensitive | lineage1.1.3.1 | None | SRR19267900 | HR-TB | lineage1.1.3.1 | None | SRR21675604 | Other | lineage1.1.3.1 | None | SRR29053515 | Sensitive | lineage1.1.3.1 | None | SRR29017069 | MDR-TB | lineage1.1.3.1 | None | SRR4423176 | Pre-XDR-TB | lineage1.1.3.1 | None | ERR13289735 | Other | lineage1.1.3.1 | None | SRR24061589 | Sensitive | lineage1.1.3.1 | None | SRR21676938 | Other | lineage1.1.3.1 | None | SRR6650138 | Sensitive | lineage1.1.3.1 | None | SRR28858594 | Sensitive | lineage1.1.3.1 | None | SRR29017035 | Pre-XDR-TB | lineage1.1.3.1 | None | SRR29017615 | MDR-TB | lineage1.1.3.1 | None | SRR21733301 | Sensitive | lineage1.1.3.1 | None | SRR29440952 | Sensitive | lineage1.1.3.1 | None | ERR4553785 | MDR-TB | lineage1.1.3.1 | None | ERR4553607 | HR-TB | lineage1.1.3.1 | None | ERR2513738 | Other | lineage1.1.3.1 | None | SRR29772605 | Pre-XDR-TB | lineage1.1.3.1;lineage3.1 | None | SRR29441106 | Sensitive | lineage1.1.3.1 | None | SRR6650128 | Sensitive | lineage1.1.3.1 | None | SRR6650195 | Sensitive | lineage1.1.3.1 | None | SRR6797735 | Other | lineage1.1.3.1 | None | ERR13290858 | Sensitive | lineage1.1.3.1 | None | SRR25827744 | Pre-XDR-TB | lineage1.1.3.1;lineage2.2.1 | None | SRR6650256 | Sensitive | lineage1.1.3.1 | None | SRR6797768 | Sensitive | lineage1.1.3.1 | None | ERR13267694 | Other | lineage1.1.3.1 | None | SRR6797298 | Sensitive | lineage1.1.3.1 | None | ERR4553719 | MDR-TB | lineage1.1.3.1 | None | ERR3132183 | Sensitive | lineage1.1.3.1 | None | SRR18149502 | Sensitive | lineage1.1.3.1 | None | ERR2446223 | Sensitive | lineage1.1.3.1 | nl | SRR15316250 | HR-TB | lineage4.4.2 | None | SRR29231568 | RR-TB | lineage1.1.3.1;lineage4.7 | None | SRR19304106 | Other | lineage1.1.3.1 | None | ERR4797667 | Sensitive | lineage1.1.3.1 | in | SRR6797473 | Sensitive | lineage1.1.3.1 | None | ERR4798438 | Sensitive | lineage1.1.3.1 | in | SRR25827449 | MDR-TB | lineage1.1.2;lineage1.1.3.1;lineage2.2.1 | None | SRR28044778 | Sensitive | lineage1.1.3.1 | None | SRR6397451 | Sensitive | lineage1.1.3.1 | ca | SRR28045581 | Sensitive | lineage1.1.3.1 | None | SRR6397543 | Sensitive | lineage1.1.3.1 | ca | ERR2706927 | RR-TB | lineage1.1.3.1;lineage4.7 | cd | SRR6650120 | Sensitive | lineage1.1.3.1 | None | SRR28044361 | HR-TB | lineage1.1.3.1 | None | ERR4819414 | Sensitive | lineage1.1.3.1 | gb | ERR4819543 | Sensitive | lineage1.1.3.1 | gb | ERR2513669 | Sensitive | lineage1.1.3.1 | gb | ERR2513736 | Sensitive | lineage1.1.3.1 | gb | SRR5341458 | MDR-TB | lineage1.1.3.1 | in | SRR18149490 | Sensitive | lineage1.1.3.1 | None | ERR4553587 | HR-TB | lineage1.1.3.1 | None | SRR28045625 | MDR-TB | lineage1.1.3.1 | None | SRR6650185 | HR-TB | lineage1.1.3.1 | None | SRR28044494 | Sensitive | lineage1.1.3.1 | None | SRR26112450 | Other | lineage1.1.3.1 | None | ERR4829785 | Sensitive | lineage1.1.3.1 | None | SRR6797512 | Sensitive | lineage1.1.3.1 | None | SRR6797356 | Sensitive | lineage1.1.3.1 | None | SRR19303900 | Sensitive | lineage1.1.3.1 | None | ERR9125342 | MDR-TB | lineage1.1.3.1 | None | SRR22249774 | Sensitive | lineage1.1.3.1 | None | ERR3509861 | HR-TB | lineage1.1.3.1 | None | SRR6650375 | Sensitive | lineage1.1.3.1 | None | ERR4553469 | MDR-TB | lineage1.1.3.1 | None | ERR9891993 | Other | lineage1.1.3.1 | None | SRR12006586 | Sensitive | lineage1.1.3.1 | None | SRR29053270 | Other | lineage1.1.3.1 | None | SRR29056247 | HR-TB | lineage1.1.3.1 | None | ERR4553541 | HR-TB | lineage1.1.3.1 | None | SRR7069985 | Sensitive | lineage1.1.3.1 | None | ERR117641 | HR-TB | lineage1.1.3.1 | None | ERR3276220 | Sensitive | lineage1.1.3.1 | nl | SRR6650161 | Sensitive | lineage1.1.3.1 | None | SRR29017033 | Pre-XDR-TB | lineage1.1.3.1 | None | SRR29126884 | Sensitive | lineage1.1.3.1 | None | SRR28044538 | Sensitive | lineage1.1.3.1 | None | ERR4820852 | Sensitive | lineage1.1.3.1 | None | SRR6797589 | Sensitive | lineage1.1.3.1 | None | ERR4553698 | MDR-TB | lineage1.1.3.1 | None | SRR6797296 | Sensitive | lineage1.1.3.1 | None | SRR29017136 | MDR-TB | lineage1.1.3.1 | None | SRR29017115 | MDR-TB | lineage1.1.3.1 | None | SRR28858601 | Sensitive | lineage1.1.3.1 | None | SRR29056178 | Other | lineage1.1.3.1 | None | SRR6650262 | Sensitive | lineage1.1.3.1 | None | SRR6797736 | Sensitive | lineage1.1.3.1 | None | SRR25827888 | XDR-TB | lineage1.1.3.1;lineage2.2.1 | None | SRR6797753 | Sensitive | lineage1.1.3.1 | None | DRR189009 | Sensitive | lineage4.4.2 | None | ERR4553632 | MDR-TB | lineage1.1.3.1 | None | SRR6650272 | Sensitive | lineage1.1.3.1 | None | SRR29126356 | Sensitive | lineage1.1.3.1 | None | ERR4817451 | Sensitive | lineage1.1.3.1 | None | SRR21690652 | Sensitive | lineage1.1.3.1 | None | SRR6797572 | Sensitive | lineage1.1.3.1 | None | SRR6797660 | Sensitive | lineage1.1.3.1 | None | ERR13290187 | Sensitive | lineage1.1.3.1 | None | ERR4797914 | Other | lineage1.1.3.1 | in | ERR4800311 | Sensitive | lineage1.1.3.1 | in | SRR29017071 | MDR-TB | lineage1.1.3.1 | None | ERR13246326 | Sensitive | lineage4.4.2 | None | SRR6650238 | Other | lineage1.1.3.1 | None | SRR7070327 | Other | lineage1.1.3.1 | None | SRR28044495 | Sensitive | lineage1.1.3.1 | None | ERR7902629 | Other | lineage1.1.3.1 | None | SRR2100209 | HR-TB | lineage1.1.3.1 | None | SRR2100648 | Sensitive | lineage1.1.3.1 | None | ERR4821381 | Sensitive | lineage1.1.3.1 | gb | ERR4821533 | Sensitive | lineage1.1.3.1 | gb | SRR25827470 | Sensitive | lineage1.1.3.1 | None | SRR28045462 | Sensitive | lineage1.1.3.1 | None | ERR4815018 | Sensitive | lineage1.1.3.1 | None | SRR28044358 | Sensitive | lineage1.1.3.1 | None | ERR13267626 | Sensitive | lineage1.1.3.1 | None | ERR13266967 | Sensitive | lineage1.1.3.1 | None |
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