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SRA data
Rv0678
- c.139_140dupGA
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
0 MDR-TB
0 Pre-XDR-TB
24 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
12
lineage3
3
lineage2.2.1.1
2
lineage3.1.2
1
lineage4.8
1
lineage4.3.3
1
lineage4.2.1
1
lineage2.2.2
1
lineage4.3.2.1
1
lineage4.1.2.1
1
Showing 1 to 10 of 11 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
25
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11083055
XDR-TB
lineage2.2.1
None
ERR13266466
HR-TB
lineage4.8
None
ERR13284375
XDR-TB
lineage2.2.1
None
ERR13288943
XDR-TB
lineage4.3.3
None
ERR2510499
XDR-TB
lineage3
None
ERR3276300
XDR-TB
lineage2.2.1
None
ERR3276301
XDR-TB
lineage2.2.1
None
ERR4797180
XDR-TB
lineage2.2.1
in
ERR4831567
XDR-TB
lineage2.2.1
None
ERR5865261
XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 25 entries
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