TB-Profiler
Home
Upload
SRA data
Rv0678
- c.140_142dupATC
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
1 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.3.3
5
lineage2.2.2
2
lineage4.7
1
Showing 1 to 3 of 3 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
8
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10748238
MDR-TB
lineage4.7
None
ERR9992714
XDR-TB
lineage2.2.2
None
SAMN02585969
Pre-XDR-TB
lineage4.3.3
za
SRR1180258
Pre-XDR-TB
lineage4.3.3
None
SRR1181218
Pre-XDR-TB
lineage4.3.3
None
SRR1181219
Pre-XDR-TB
lineage4.3.3
None
SRR1183035
Pre-XDR-TB
lineage4.3.3
None
SRR22873596
Pre-XDR-TB
lineage2.2.2
None
Showing 1 to 8 of 8 entries
Previous
1
Next