Rv0678 - c.144dupC
Drug resistance types
1 Sensitive
3 RR-TB
0 HR-TB
15 MDR-TB
52 Pre-XDR-TB
18 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 11 |
| lineage3 | 5 |
| lineage3;lineage2.2.1 | 1 |
| lineage2.2.1 | 37 |
| lineage2.2.2 | 13 |
| lineage3.1.2.1;lineage2.2.1 | 1 |
| lineage4.4.1.1 | 6 |
| lineage2.2.1.1 | 2 |
| lineage4.1.1.3 | 4 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.3.2.1 | 1 |
| lineage4.3.2.1;lineage2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3;lineage2.2.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 91 |
Geographic prevalence
Country level data for this variant is available for 49 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8975914 | MDR-TB | lineage4.3.3 | None | ERR2510504 | Pre-XDR-TB | lineage3 | pk | ERR4799888 | XDR-TB | lineage3;lineage2.2.1 | in | ERR4831253 | XDR-TB | lineage2.2.1 | de | ERR2516364 | Pre-XDR-TB | lineage2.2.1 | be | ERR8975911 | MDR-TB | lineage2.2.1 | None | ERR8975916 | Pre-XDR-TB | lineage2.2.2 | None | ERR4797884 | XDR-TB | lineage3.1.2.1;lineage2.2.1 | in | SRR7341698 | MDR-TB | lineage4.4.1.1 | ro | ERR8975808 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799508 | XDR-TB | lineage2.2.1 | in | ERR5918018 | Pre-XDR-TB | lineage2.2.1 | za | ERR8665955 | Pre-XDR-TB | lineage2.2.1 | None | ERR8976013 | MDR-TB | lineage4.3.3 | None | ERR5918016 | Pre-XDR-TB | lineage2.2.1 | za | ERR4796328 | XDR-TB | lineage2.2.1 | in | ERR8975745 | Pre-XDR-TB | lineage2.2.2 | None | ERR4822395 | MDR-TB | lineage2.2.1 | kg | ERR1352358 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024996 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5918120 | Pre-XDR-TB | lineage4.3.3 | za | ERR5917970 | Pre-XDR-TB | lineage4.3.3 | za | ERR4797521 | XDR-TB | lineage2.2.1 | in | ERR5918020 | Pre-XDR-TB | lineage2.2.1 | za | ERR5918109 | Pre-XDR-TB | lineage2.2.1 | za | ERR4798248 | MDR-TB | lineage2.2.1.1 | in | ERR8975777 | MDR-TB | lineage4.1.1.3 | None | ERR4797181 | Pre-XDR-TB | lineage3 | in | ERR5917976 | Pre-XDR-TB | lineage4.3.3 | za | ERR4798617 | XDR-TB | lineage2.2.1 | in | ERR2510818 | Sensitive | lineage4.1.2 | it | ERR4799131 | XDR-TB | lineage2.2.1 | in | ERR8975846 | Pre-XDR-TB | lineage2.2.2 | None | ERR4797898 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830559 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975031 | MDR-TB | lineage2.2.1 | None | ERR8975787 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR8975716 | RR-TB | lineage3 | None | ERR5918116 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR5917986 | Pre-XDR-TB | lineage2.2.2 | za | ERR4810622 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8975976 | Pre-XDR-TB | lineage2.2.2 | None | ERR4799259 | Pre-XDR-TB | lineage2.2.1 | in | ERR8975717 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4822600 | XDR-TB | lineage4.3.3 | de | ERR4830558 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975005 | Pre-XDR-TB | lineage2.2.1 | None | ERR8976047 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831425 | Other | lineage3 | None | ERR5918012 | Pre-XDR-TB | lineage2.2.1 | za | ERR8975686 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR2516597 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4798457 | XDR-TB | lineage2.2.1 | in | ERR1352350 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8975981 | RR-TB | lineage2.2.1 | None | ERR2515541 | XDR-TB | lineage2.2.2 | za | ERR8975687 | Pre-XDR-TB | lineage4.3.2.1;lineage2.2.2 | None | ERR8975646 | MDR-TB | lineage4.1.1.3 | None | ERR8975688 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR3148169 | Pre-XDR-TB | lineage4.1.2.1 | mx | ERR2677416 | XDR-TB | lineage4.3.3 | de | ERR4808864 | Pre-XDR-TB | lineage2.2.2 | za | ERR2864225 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1352357 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4822324 | XDR-TB | lineage4.3.3 | de | ERR4799040 | Pre-XDR-TB | lineage2.2.1 | in | ERR8975512 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR3335725 | RR-TB | lineage3 | pk | ERR4822599 | XDR-TB | lineage4.3.3 | de | ERR8975949 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993171 | MDR-TB | lineage2.2.2 | None | ERR8975912 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975948 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4797311 | Pre-XDR-TB | lineage3;lineage2.2.1.1 | in | ERR1352355 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5918011 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975653 | MDR-TB | lineage2.2.1 | None | ERR8975662 | MDR-TB | lineage2.2.1 | None | ERR8975816 | MDR-TB | lineage4.4.1.1 | None | ERR4796976 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR8975915 | Pre-XDR-TB | lineage4.8 | None | ERR8975774 | MDR-TB | lineage2.2.1 | None | ERR8975865 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976014 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975847 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975648 | XDR-TB | lineage2.2.1 | None | ERR8975671 | MDR-TB | lineage2.2.1 | None | ERR4797885 | XDR-TB | lineage2.2.1 | None | ERR8975781 | XDR-TB | lineage4.1.1.3 | None | SRR6152854 | Other | lineage4.1.2.1 | None | ERR4800476 | XDR-TB | lineage2.2.1.1 | in |
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