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SRA data
Rv0678
- c.144dupC
Drug resistance types
0 Sensitive
21 RR-TB
11 HR-TB
87 MDR-TB
0 Pre-XDR-TB
384 XDR-TB
14 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
168
lineage2.2.2
102
lineage3
54
lineage4.3.3
37
lineage4.4.1.1
27
lineage1.2.2.2
20
lineage4.1.1.3
19
lineage2.2.1.1
13
lineage4.1.2.1
12
lineage4.8
7
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
517
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10112853
XDR-TB
lineage4.1.1.3
None
ERR10112902
XDR-TB
lineage2.2.2
None
ERR10112903
XDR-TB
lineage2.2.2
None
ERR10112905
MDR-TB
lineage2.2.1
None
ERR10748106
XDR-TB
lineage2.2.1
None
ERR10748117
RR-TB
lineage4.4.1.1
None
ERR10748148
XDR-TB
lineage2.2.1
None
ERR10748167
MDR-TB
lineage4.3.3
None
ERR10748198
XDR-TB
lineage2.2.2
None
ERR10748207
XDR-TB
lineage1.2.2.2
None
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