Rv0678 - c.144dupC


Drug resistance types
0 Sensitive 15 RR-TB 5 HR-TB 67 MDR-TB 0 Pre-XDR-TB 293 XDR-TB 8 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 3
lineage2.2.2 83
lineage2.2.1;lineage3 5
lineage4.1.1.3 15
lineage2.2.1 134
lineage4.2.1 1
lineage4.3.3 27
lineage4.4.1.1 23
lineage4.1.2.1 9
lineage4.7 3
lineage4.3.3;lineage4.4.1.1 1
lineage2.2.1.1 9
lineage3 19
lineage4.8 5
lineage4.3.2.1 4
lineage4.1.2 2
lineage1.2.2.2 18
lineage4.3.4.2 2
lineage1.1.2 4
lineage3.1;lineage9 1
lineage4.2.2.2 1
lineage1.2.2.2;lineage2.2.1 1
lineage1.1.3.1;lineage2.2.1 1
lineage2.2.1.1;lineage3 1
lineage2.2.1;lineage4.2.2.2 1
lineage4.3.4.1 3
lineage2.2.1.2 1
lineage4.4.1.1.1 3
lineage2.2.1;lineage3.1.2.1 1
lineage4.8.1 2
lineage4.4.1.2 1
lineage2.2.2;lineage4.3.2.1 1
lineage2.2.1;lineage4.3.3 1
lineage1.1.3.2 1
lineage4.1.1.1 1
spoligotype Counts
spoligotype Count
None 388
Geographic prevalence
Country level data for this variant is available for 49 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11488994 MDR-TB lineage4.3.4.2.1 None
ERR9993201 XDR-TB lineage2.2.2 None
ERR4799888 XDR-TB lineage2.2.1;lineage3 in
SRR25827487 XDR-TB lineage2.2.1;lineage3 None
ERR9993083 XDR-TB lineage4.1.1.3 None
ERR11043975 XDR-TB lineage2.2.1 None
ERR9992742 XDR-TB lineage2.2.2 None
ERR8975911 MDR-TB lineage2.2.1 None
ERR8975916 XDR-TB lineage2.2.2 None
SRR24256150 MDR-TB lineage4.2.1 None
ERR8975914 MDR-TB lineage4.3.3 None
SRR25827513 XDR-TB lineage2.2.1;lineage3 None
ERR8975808 XDR-TB lineage2.2.1 None
SRR7341698 MDR-TB lineage4.4.1.1 ro
ERR9992721 XDR-TB lineage2.2.2 None
ERR10748106 XDR-TB lineage2.2.1 None
ERR8976013 MDR-TB lineage4.3.3 None
ERR11488528 MDR-TB lineage4.3.3 None
ERR9993086 XDR-TB lineage4.1.2.1 None
ERR5918016 XDR-TB lineage2.2.1 za
ERR4822395 MDR-TB lineage2.2.1 kg
ERR9993152 RR-TB lineage2.2.1 None
ERR9993013 RR-TB lineage4.4.1.1 None
ERR9992665 XDR-TB lineage2.2.2 None
SRR2024996 XDR-TB lineage2.2.1 cn
ERR11068441 MDR-TB lineage4.7 None
ERR5918120 XDR-TB lineage4.3.3 za
ERR9992901 XDR-TB lineage4.3.3;lineage4.4.1.1 None
ERR11044004 XDR-TB lineage2.2.1 None
ERR9992796 XDR-TB lineage2.2.1 None
ERR5918109 XDR-TB lineage2.2.1 za
ERR9993088 MDR-TB lineage4.1.1.3 None
ERR9993008 XDR-TB lineage2.2.1 None
ERR4797521 XDR-TB lineage2.2.1 in
ERR9993071 XDR-TB lineage4.4.1.1 None
ERR9992731 XDR-TB lineage2.2.2 None
ERR9992943 RR-TB lineage2.2.1.1 None
SRR25827753 XDR-TB lineage3 None
ERR9992755 RR-TB lineage4.8 None
ERR9993084 XDR-TB lineage4.3.2.1 None
ERR4831591 XDR-TB lineage2.2.2 None
SRR22873604 XDR-TB lineage2.2.1 None
ERR8975031 MDR-TB lineage2.2.1 None
ERR4797898 XDR-TB lineage2.2.1 in
ERR9992980 XDR-TB lineage2.2.1 None
ERR9992699 XDR-TB lineage2.2.2 None
ERR9993164 XDR-TB lineage2.2.2 None
ERR9992729 XDR-TB lineage2.2.2 None
SRR26331591 XDR-TB lineage2.2.1 None
SRR7131091 Other lineage4.1.2 None
ERR9992735 XDR-TB lineage2.2.2 None
ERR9992919 XDR-TB lineage1.2.2.2 None
ERR9992752 XDR-TB lineage2.2.1 None
ERR10112905 MDR-TB lineage2.2.1 None
ERR9992671 XDR-TB lineage2.2.1 None
ERR4553930 XDR-TB lineage2.2.1 None
ERR9992738 XDR-TB lineage2.2.2 None
SRR9971179 XDR-TB lineage4.3.3 None
ERR9992813 XDR-TB lineage2.2.2 None
ERR9992890 MDR-TB lineage4.4.1.1 None
ERR8975976 XDR-TB lineage2.2.2 None
ERR5918012 XDR-TB lineage2.2.1 za
ERR9993204 MDR-TB lineage2.2.2 None
ERR9993248 RR-TB lineage2.2.1 None
ERR4798457 XDR-TB lineage2.2.1 in
ERR10748267 XDR-TB lineage2.2.2 None
ERR8975981 RR-TB lineage2.2.1 None
ERR9993163 XDR-TB lineage2.2.1 None
ERR4831425 Other lineage3 None
ERR2864225 XDR-TB lineage4.3.4.2 pt
SRR25827591 XDR-TB lineage1.1.2 None
ERR8975646 MDR-TB lineage4.1.1.3 None
ERR9992640 XDR-TB lineage4.4.1.1 None
ERR9993262 XDR-TB lineage2.2.2 None
ERR9993241 XDR-TB lineage2.2.2 None
ERR9992638 XDR-TB lineage4.1.1.3 None
ERR9992706 XDR-TB lineage2.2.2 None
ERR9993192 XDR-TB lineage2.2.2 None
ERR9993038 XDR-TB lineage2.2.2 None
SRR25827444 XDR-TB lineage3 None
ERR9992975 XDR-TB lineage2.2.2 None
SRR25827800 MDR-TB lineage1.1.2 None
SRR28498375 XDR-TB lineage2.2.1 None
SRR28888067 XDR-TB lineage2.2.1 None
SRR28351357 XDR-TB lineage2.2.1 None
SRR28044936 XDR-TB lineage3 None
SRR28888053 MDR-TB lineage4.3.3 None
SRR28888065 XDR-TB lineage2.2.1 None
SRR28888070 XDR-TB lineage2.2.1 None
SRR28044949 XDR-TB lineage2.2.1 None
SRR28044933 XDR-TB lineage2.2.1 None
SRR28045460 XDR-TB lineage2.2.1 None
ERR11774884 XDR-TB lineage2.2.2 None
SRR28498673 XDR-TB lineage2.2.1 None
SRR28351161 XDR-TB lineage2.2.1 None
ERR2510504 XDR-TB lineage3 pk
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR3148169 XDR-TB lineage4.1.2.1 mx
ERR2677416 XDR-TB lineage4.3.3 de
ERR2515541 XDR-TB lineage2.2.2 za
ERR9992958 XDR-TB lineage2.2.2 None
SRR20632824 XDR-TB lineage2.2.1 None
ERR9992902 XDR-TB lineage4.4.1.1 None
ERR8975948 XDR-TB lineage4.4.1.1 None
SRR9028485 Other lineage3 None
SRR25207055 XDR-TB lineage2.2.1.1 None
ERR9992949 XDR-TB lineage1.2.2.2 None
ERR5918011 XDR-TB lineage2.2.2 za
ERR8975662 MDR-TB lineage2.2.1 None
ERR11488672 MDR-TB lineage2.2.1 None
SRR24710102 XDR-TB lineage2.2.1 None
ERR9992984 MDR-TB lineage2.2.2 None
ERR8975915 XDR-TB lineage4.8 None
ERR4796976 XDR-TB lineage4.2.2.2 in
SRR22175220 XDR-TB lineage2.2.1 None
ERR9992831 XDR-TB lineage2.2.1 None
SRR25827540 XDR-TB lineage2.2.1 None
SRR25207181 XDR-TB lineage2.2.1.1 None
ERR9993133 XDR-TB lineage4.3.3 None
SRR16156282 XDR-TB lineage4.1.1.3 None
ERR8975865 XDR-TB lineage2.2.2 None
ERR8975774 MDR-TB lineage2.2.1 None
ERR9992963 XDR-TB lineage1.2.2.2 None
ERR9992715 XDR-TB lineage2.2.2 None
ERR4553946 XDR-TB lineage2.2.1 None
SRR9028476 Other lineage3 None
ERR8975648 XDR-TB lineage2.2.1 None
ERR9992990 RR-TB lineage4.4.1.1 None
SRR25207110 XDR-TB lineage2.2.1 None
SRR22424779 XDR-TB lineage2.2.1 None
ERR5918041 RR-TB lineage2.2.1 None
ERR9993003 XDR-TB lineage2.2.2 None
ERR4831253 XDR-TB lineage2.2.1 de
SRR9971285 XDR-TB lineage4.3.3 None
ERR9993055 XDR-TB lineage2.2.1 None
ERR11067627 XDR-TB lineage2.2.1 None
ERR9993196 XDR-TB lineage2.2.2 None
ERR9992668 XDR-TB lineage4.4.1.1 None
SRR14782567 XDR-TB lineage2.2.1 None
ERR9992925 XDR-TB lineage1.2.2.2 None
ERR9992983 XDR-TB lineage4.4.1.1 None
ERR8975745 XDR-TB lineage2.2.2 None
ERR4799951 XDR-TB lineage2.2.1 None
ERR5918020 XDR-TB lineage2.2.1 za
ERR5917985 MDR-TB lineage2.2.1 None
ERR9992889 XDR-TB lineage1.2.2.2 None
ERR9993212 MDR-TB lineage2.2.1.1 None
ERR9993202 XDR-TB lineage2.2.1.1 None
ERR9992708 XDR-TB lineage4.1.1.3 None
ERR9993150 MDR-TB lineage2.2.1 None
SRR10040250 XDR-TB lineage2.2.2 None
ERR9993004 XDR-TB lineage2.2.2 None
ERR10748249 MDR-TB lineage4.3.3 None
ERR8975777 MDR-TB lineage4.1.1.3 None
ERR4799131 HR-TB lineage2.2.1 in
ERR9993230 XDR-TB lineage4.1.1.3 None
ERR9992825 XDR-TB lineage1.2.2.2 None
ERR9992779 XDR-TB lineage4.3.2.1 None
ERR10748499 XDR-TB lineage2.2.2 None
SRR6511637 XDR-TB lineage4.3.4.2 None
ERR11068151 MDR-TB lineage4.7 None
ERR10748330 MDR-TB lineage2.2.1 None
ERR9992670 XDR-TB lineage4.1.2.1 None
ERR9992694 XDR-TB lineage2.2.1 None
ERR11488679 MDR-TB lineage4.1.2.1 None
ERR5917986 XDR-TB lineage2.2.2 za
ERR9993002 MDR-TB lineage2.2.2 None
ERR8975716 RR-TB lineage3 None
ERR9992627 XDR-TB lineage4.4.1.1 None
ERR10112853 XDR-TB lineage4.1.1.3 None
ERR4810622 XDR-TB lineage2.2.1 cn
ERR9993252 XDR-TB lineage2.2.2 None
SRR12142336 MDR-TB lineage2.2.1 None
SRR9738479 XDR-TB lineage4.1.2.1 None
ERR11488920 MDR-TB lineage2.2.1 None
ERR9992703 XDR-TB lineage2.2.2 None
ERR9993169 XDR-TB lineage2.2.2 None
ERR9992810 XDR-TB lineage2.2.2 None
ERR11043615 XDR-TB lineage4.3.3 None
ERR9992947 MDR-TB lineage4.3.2.1 None
ERR9992803 XDR-TB lineage2.2.2 None
ERR9992873 XDR-TB lineage1.2.2.2 None
ERR2516597 XDR-TB lineage4.1.2.1 pe
ERR9993233 RR-TB lineage4.4.1.1 None
SRR9971180 XDR-TB lineage4.3.3 None
SRR25827366 XDR-TB lineage2.2.1 None
ERR9992898 XDR-TB lineage1.2.2.2;lineage2.2.1 None
ERR8975686 XDR-TB lineage4.3.2.1 None
ERR9992681 XDR-TB lineage2.2.2 None
ERR10748167 MDR-TB lineage4.3.3 None
ERR9993185 XDR-TB lineage2.2.1 None
ERR4822324 XDR-TB lineage4.3.3 de
ERR9992965 XDR-TB lineage2.2.1 None
SRR22175221 XDR-TB lineage2.2.1 None
ERR4872271 XDR-TB lineage2.2.1 None
ERR9992970 XDR-TB lineage2.2.2 None
ERR8975512 XDR-TB lineage4.4.1.1 None
ERR9992993 HR-TB lineage2.2.1 None
SRR14782483 HR-TB lineage2.2.1 None
SRR28044702 XDR-TB lineage3 None
SRR25827888 XDR-TB lineage1.1.3.1;lineage2.2.1 None
SRR28498648 MDR-TB lineage2.2.1 None
SRR28044922 XDR-TB lineage3 None
SRR28888063 XDR-TB lineage2.2.1 None
SRR28044932 XDR-TB lineage3 None
SRR28045455 XDR-TB lineage3 None
SRR28888075 XDR-TB lineage2.2.1 None
SRR28045569 MDR-TB lineage2.2.1 None
SRR28044686 XDR-TB lineage2.2.1 None
SRR28045577 XDR-TB lineage2.2.1 None
SRR28498446 XDR-TB lineage2.2.1 None
ERR11774882 XDR-TB lineage2.2.2 None
SRR28706518 XDR-TB lineage2.2.1 None
SRR28351354 XDR-TB lineage2.2.1 None
SRR28498451 XDR-TB lineage2.2.1 None
ERR11773723 XDR-TB lineage2.2.2 None
SRR28888078 XDR-TB lineage2.2.1 None
SRR22175200 XDR-TB lineage2.2.1.1 None
ERR4797311 XDR-TB lineage2.2.1.1;lineage3 in
SRR22175219 XDR-TB lineage2.2.1;lineage4.2.2.2 None
ERR1352355 XDR-TB lineage2.2.1 cn
SRR25827462 XDR-TB lineage3 None
ERR9992900 XDR-TB lineage2.2.2 None
ERR9993070 XDR-TB lineage2.2.2 None
ERR10748498 XDR-TB lineage4.3.3 None
ERR9993207 Other lineage4.4.1.1 None
SRR22873603 XDR-TB lineage2.2.1 None
ERR9030318 MDR-TB lineage2.2.1 None
SRR20632806 XDR-TB lineage2.2.1 None
SRR16087909 MDR-TB lineage2.2.1 None
ERR11488685 MDR-TB lineage2.2.1 None
ERR9030331 XDR-TB lineage2.2.2 None
ERR9992642 MDR-TB lineage1.2.2.2 None
ERR9993121 XDR-TB lineage4.1.1.3 None
ERR9993098 XDR-TB lineage2.2.2 None
ERR8975847 XDR-TB lineage2.2.2 None
ERR4797885 XDR-TB lineage2.2.1 None
ERR11488964 XDR-TB lineage4.3.4.1 None
ERR9992816 RR-TB lineage2.2.1 None
ERR10112903 XDR-TB lineage2.2.2 None
ERR8975781 XDR-TB lineage4.1.1.3 None
ERR9992956 XDR-TB lineage2.2.2 None
SRR25827819 XDR-TB lineage2.2.1.2 None
ERR9992932 XDR-TB lineage1.2.2.2 None
ERR9992624 XDR-TB lineage4.4.1.1.1 None
ERR9992645 XDR-TB lineage4.1.2.1 None
ERR9992960 XDR-TB lineage2.2.2 None
ERR11488841 XDR-TB lineage4.3.4.2.1 None
ERR4800476 XDR-TB lineage2.2.1.1 in
ERR9992837 XDR-TB lineage4.4.1.1 None
SRR26397809 XDR-TB lineage4.3.4.1 None
ERR9992986 XDR-TB lineage1.2.2.2 None
SRR25827593 XDR-TB lineage1.1.2 None
ERR9993005 XDR-TB lineage2.2.2 None
ERR9993216 MDR-TB lineage4.1.1.3 None
ERR4797884 XDR-TB lineage2.2.1;lineage3.1.2.1 in
ERR2516364 XDR-TB lineage2.2.1 be
ERR9993057 XDR-TB lineage1.2.2.2 None
ERR4799508 XDR-TB lineage2.2.1 in
ERR8665955 XDR-TB lineage2.2.1 None
ERR5918018 XDR-TB lineage2.2.1 za
ERR9992650 MDR-TB lineage2.2.1 None
ERR9992780 XDR-TB lineage2.2.1.1 None
ERR4796328 XDR-TB lineage2.2.1 in
ERR11488970 XDR-TB lineage4.3.4.1 None
ERR9993045 XDR-TB lineage2.2.2 None
ERR9992955 MDR-TB lineage1.2.2.2 None
SRR13232613 XDR-TB lineage2.2.1 None
ERR1352358 XDR-TB lineage2.2.1 cn
ERR9992795 XDR-TB lineage2.2.2 None
ERR5917970 XDR-TB lineage4.3.3 za
ERR10748117 RR-TB lineage4.4.1.1 None
ERR9992860 XDR-TB lineage1.2.2.2 None
ERR11081809 XDR-TB lineage4.3.3 None
ERR9992655 XDR-TB lineage4.8.1 None
ERR9993129 XDR-TB lineage4.4.1.1 None
ERR4798248 MDR-TB lineage2.2.1.1 in
SRR23862102 MDR-TB lineage2.2.1 None
ERR9992688 XDR-TB lineage2.2.2 None
ERR9993171 XDR-TB lineage2.2.2 None
ERR9992959 XDR-TB lineage2.2.2 None
ERR9993060 XDR-TB lineage2.2.1 None
ERR9993238 XDR-TB lineage2.2.2 None
SRR25827590 HR-TB lineage1.1.2 None
ERR9992814 RR-TB lineage2.2.1 None
ERR11488917 MDR-TB lineage4.3.4.2.1 None
ERR9993107 XDR-TB lineage4.4.1.1 None
ERR9993125 MDR-TB lineage4.8.1 None
ERR9992663 XDR-TB lineage4.1.1.3 None
ERR9992992 XDR-TB lineage4.4.1.1.1 None
ERR10748245 MDR-TB lineage4.3.3 None
ERR9993134 MDR-TB lineage3 None
ERR9993033 MDR-TB lineage2.2.2 None
ERR11488629 MDR-TB lineage2.2.1 None
ERR9992897 XDR-TB lineage1.2.2.2 None
ERR4797181 XDR-TB lineage3 in
ERR9992977 XDR-TB lineage2.2.2 None
SRR9028477 Other lineage3 None
ERR4798617 XDR-TB lineage2.2.1 in
ERR9993139 XDR-TB lineage2.2.1 None
ERR11488678 MDR-TB lineage4.3.3 None
SRR25827799 XDR-TB lineage4.8 None
ERR9993046 XDR-TB lineage2.2.2 None
ERR9993037 XDR-TB lineage4.1.1.3 None
SRR25827370 MDR-TB lineage2.2.1;lineage3 None
ERR9993237 XDR-TB lineage2.2.1 None
ERR2510818 Other lineage4.1.2 it
ERR9993195 XDR-TB lineage2.2.2 None
SRR24498059 XDR-TB lineage3 None
ERR4830559 XDR-TB lineage4.3.3 None
ERR9992941 MDR-TB lineage4.3.3 None
ERR9992856 XDR-TB lineage2.2.2 None
ERR9993062 XDR-TB lineage1.2.2.2 None
ERR11488965 MDR-TB lineage2.2.1 None
ERR9992961 XDR-TB lineage1.2.2.2 None
ERR5918116 XDR-TB lineage4.1.2.1 za
ERR8975787 XDR-TB lineage4.4.1.1 None
ERR4799259 XDR-TB lineage2.2.1 in
ERR8975717 XDR-TB lineage4.1.1.3 None
ERR9992933 XDR-TB lineage2.2.1 None
SRR9028489 MDR-TB lineage3 None
SRR25827438 XDR-TB lineage4.8 None
ERR10748550 XDR-TB lineage2.2.1 None
ERR10748207 XDR-TB lineage1.2.2.2 None
ERR4822600 XDR-TB lineage4.3.3 de
SRR18002973 XDR-TB lineage2.2.1 None
ERR9992764 XDR-TB lineage1.2.2.2 None
ERR4830558 XDR-TB lineage4.3.3 None
ERR8976047 XDR-TB lineage2.2.1 None
ERR9992736 XDR-TB lineage2.2.2 None
SRR25827482 XDR-TB lineage2.2.1 None
ERR8975005 XDR-TB lineage2.2.1 None
ERR9992966 XDR-TB lineage2.2.1 None
ERR10748148 XDR-TB lineage2.2.1 None
ERR1352350 XDR-TB lineage2.2.1 cn
ERR9993149 HR-TB lineage4.4.1.1 None
SRR25827542 XDR-TB lineage4.4.1.2 None
ERR9029361 XDR-TB lineage2.2.2 None
ERR8975687 XDR-TB lineage2.2.2;lineage4.3.2.1 None
ERR9992846 XDR-TB lineage2.2.2 None
ERR4808864 XDR-TB lineage2.2.2 za
ERR4808864 XDR-TB lineage2.2.2 za
SRR24710145 XDR-TB lineage2.2.1 None
ERR10748198 XDR-TB lineage2.2.2 None
ERR1352357 XDR-TB lineage2.2.1 cn
ERR9993068 XDR-TB lineage2.2.1 None
ERR9992944 XDR-TB lineage2.2.2 None
SRR13232759 XDR-TB lineage2.2.1;lineage4.3.3 None
ERR10748466 XDR-TB lineage2.2.1 None
ERR4831593 XDR-TB lineage2.2.2 None
ERR4799040 XDR-TB lineage2.2.1 in
ERR8975688 XDR-TB lineage4.4.1.1 None
SRR22175172 XDR-TB lineage2.2.1 None
ERR9993124 MDR-TB lineage4.8 None
ERR9992788 RR-TB lineage2.2.1 None
ERR11068326 MDR-TB lineage4.7 None
ERR9992654 XDR-TB lineage4.3.3 None
ERR4822599 XDR-TB lineage4.3.3 de
ERR8975949 XDR-TB lineage2.2.2 None
SRR12882236 MDR-TB lineage1.1.3.2 None
ERR9992842 MDR-TB lineage2.2.1 None
ERR9992942 XDR-TB lineage2.2.2 None
SRR28045908 XDR-TB lineage2.2.1 None
ERR3335725 RR-TB lineage3 pk
ERR8975846 XDR-TB lineage2.2.2 None
ERR9993113 XDR-TB lineage4.4.1.1.1 None
ERR9992631 XDR-TB lineage2.2.2 None
ERR9992862 XDR-TB lineage2.2.2 None
SRR25827640 XDR-TB lineage2.2.1 None
ERR8975912 XDR-TB lineage2.2.1 None
ERR9992684 XDR-TB lineage2.2.2 None
ERR11488628 MDR-TB lineage2.2.1 None
ERR10748352 XDR-TB lineage2.2.2 None
ERR10748262 MDR-TB lineage2.2.1 None
ERR8975816 MDR-TB lineage4.4.1.1 None
ERR9992664 MDR-TB lineage4.3.3 None
ERR8976014 XDR-TB lineage2.2.2 None
ERR9993168 XDR-TB lineage4.1.1.1 None
ERR11044658 XDR-TB lineage2.2.1 None
SRR6152854 Other lineage4.1.2.1 None
SRR25827669 XDR-TB lineage2.2.1;lineage3 None
SRR20632777 XDR-TB lineage2.2.1 None
ERR9993082 MDR-TB lineage2.2.2 None
ERR8975671 MDR-TB lineage2.2.1 None
ERR9992632 XDR-TB lineage4.4.1.1 None
ERR9992827 MDR-TB lineage4.3.3 None
ERR4276886 XDR-TB lineage2.2.1 None
ERR9993228 XDR-TB lineage2.2.1 None