Rv0678 - c.144dupC
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
21 RR-TB
11 HR-TB
87 MDR-TB
0 Pre-XDR-TB
383 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 27 |
| lineage2.2.1 | 167 |
| lineage4.1.1.3 | 19 |
| lineage4.3.2.1 | 4 |
| lineage2.2.2 | 102 |
| lineage4.8 | 7 |
| lineage4.1.2.1 | 12 |
| lineage4.3.3 | 37 |
| lineage4.3.4.2 | 2 |
| lineage4.3.4.1 | 4 |
| lineage3 | 54 |
| lineage4.3.4.2.1 | 3 |
| lineage1.2.2.2 | 20 |
| lineage4.4.1.1.1 | 4 |
| lineage2.2.1.1 | 13 |
| lineage4.1.1.1 | 1 |
| lineage2.2.2;lineage4.3.2.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.7 | 3 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1;lineage3 | 5 |
| lineage3.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.2.2 | 3 |
| La1.2.BCG | 1 |
| lineage4.4.1.2 | 1 |
| lineage3.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1.1;lineage3 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage4.1.2 | 3 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage1.1.2 | 4 |
| lineage4.8.1 | 2 |
| lineage3.1;lineage9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage1.1.3.1;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 516 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8975512 | XDR-TB | lineage4.4.1.1 | None | SRR28888075 | XDR-TB | lineage2.2.1 | None | ERR8975646 | MDR-TB | lineage4.1.1.3 | None | ERR8975686 | XDR-TB | lineage4.3.2.1 | None | ERR8975717 | XDR-TB | lineage4.1.1.3 | None | ERR8975781 | XDR-TB | lineage4.1.1.3 | None | ERR8975787 | XDR-TB | lineage4.4.1.1 | None | ERR8975846 | XDR-TB | lineage2.2.2 | None | ERR8975847 | XDR-TB | lineage2.2.2 | None | ERR8975915 | XDR-TB | lineage4.8 | None | ERR8975912 | XDR-TB | lineage2.2.1 | None | ERR8975981 | RR-TB | lineage2.2.1 | None | ERR8975662 | MDR-TB | lineage2.2.1 | None | ERR8975745 | XDR-TB | lineage2.2.2 | None | ERR8975774 | MDR-TB | lineage2.2.1 | None | ERR8975865 | XDR-TB | lineage2.2.2 | None | ERR9992645 | XDR-TB | lineage4.1.2.1 | None | ERR9992664 | MDR-TB | lineage4.3.3 | None | ERR9993037 | XDR-TB | lineage4.1.1.3 | None | ERR9993237 | XDR-TB | lineage2.2.1 | None | SRR6511637 | XDR-TB | lineage4.3.4.2 | None | ERR8975005 | XDR-TB | lineage2.2.1 | None | ERR8975948 | XDR-TB | lineage4.4.1.1 | None | ERR9992975 | XDR-TB | lineage2.2.2 | None | ERR2516597 | XDR-TB | lineage4.1.2.1 | pe | ERR1352355 | XDR-TB | lineage2.2.1 | cn | ERR1352357 | XDR-TB | lineage2.2.1 | cn | ERR1352358 | XDR-TB | lineage2.2.1 | cn | SRR14782483 | HR-TB | lineage2.2.1 | None | SRR20632806 | XDR-TB | lineage2.2.1 | None | SRR22424779 | XDR-TB | lineage2.2.1 | None | ERR11488970 | XDR-TB | lineage4.3.4.1 | None | ERR11488678 | MDR-TB | lineage4.3.3 | None | SRR26397809 | XDR-TB | lineage4.3.4.1 | None | SRR9028477 | Other | lineage3 | None | ERR13289403 | XDR-TB | lineage2.2.1 | None | ERR9992631 | XDR-TB | lineage2.2.2 | None | ERR10748148 | XDR-TB | lineage2.2.1 | None | ERR10748117 | RR-TB | lineage4.4.1.1 | None | SRR20632824 | XDR-TB | lineage2.2.1 | None | ERR9992902 | XDR-TB | lineage4.4.1.1 | None | SRR28888053 | MDR-TB | lineage4.3.3 | None | ERR10748106 | XDR-TB | lineage2.2.1 | None | ERR11488917 | MDR-TB | lineage4.3.4.2.1 | None | SRR25827462 | XDR-TB | lineage3 | None | ERR9993238 | XDR-TB | lineage2.2.2 | None | ERR9992873 | XDR-TB | lineage1.2.2.2 | None | ERR11488628 | MDR-TB | lineage2.2.1 | None | ERR9993196 | XDR-TB | lineage2.2.2 | None | ERR9992810 | XDR-TB | lineage2.2.2 | None | ERR9993228 | XDR-TB | lineage2.2.1 | None | ERR9993013 | RR-TB | lineage4.4.1.1 | None | ERR13286137 | XDR-TB | lineage2.2.1 | None | ERR13289406 | XDR-TB | lineage4.1.1.3 | None | SRR24710102 | XDR-TB | lineage2.2.1 | None | ERR4799951 | XDR-TB | lineage2.2.1 | None | ERR10748499 | XDR-TB | lineage2.2.2 | None | ERR9993207 | Other | lineage4.4.1.1 | None | SRR25827438 | XDR-TB | lineage4.8 | None | ERR4797521 | XDR-TB | lineage2.2.1 | in | ERR8975031 | MDR-TB | lineage2.2.1 | None | ERR4822395 | MDR-TB | lineage2.2.1 | kg | ERR9992671 | XDR-TB | lineage2.2.1 | None | ERR13289366 | XDR-TB | lineage2.2.1 | None | ERR13289380 | XDR-TB | lineage2.2.2 | None | ERR9992990 | RR-TB | lineage4.4.1.1 | None | ERR9992966 | XDR-TB | lineage2.2.1 | None | ERR9992897 | XDR-TB | lineage1.2.2.2 | None | ERR9992670 | XDR-TB | lineage4.1.2.1 | None | ERR9992960 | XDR-TB | lineage2.2.2 | None | ERR9993134 | MDR-TB | lineage3 | None | ERR2516364 | XDR-TB | lineage2.2.1 | be | ERR9992796 | XDR-TB | lineage2.2.1 | None | ERR9992842 | MDR-TB | lineage2.2.1 | None | ERR9992961 | XDR-TB | lineage1.2.2.2 | None | ERR9993185 | XDR-TB | lineage2.2.1 | None | ERR9993113 | XDR-TB | lineage4.4.1.1.1 | None | ERR8975816 | MDR-TB | lineage4.4.1.1 | None | ERR9992942 | XDR-TB | lineage2.2.2 | None | ERR9993192 | XDR-TB | lineage2.2.2 | None | ERR9992738 | XDR-TB | lineage2.2.2 | None | ERR9992735 | XDR-TB | lineage2.2.2 | None | ERR9992729 | XDR-TB | lineage2.2.2 | None | ERR9992837 | XDR-TB | lineage4.4.1.1 | None | ERR9993252 | XDR-TB | lineage2.2.2 | None | ERR9993045 | XDR-TB | lineage2.2.2 | None | ERR9993046 | XDR-TB | lineage2.2.2 | None | ERR9993070 | XDR-TB | lineage2.2.2 | None | ERR9993212 | MDR-TB | lineage2.2.1.1 | None | ERR9992856 | XDR-TB | lineage2.2.2 | None | ERR4810622 | XDR-TB | lineage2.2.1 | cn | ERR10748207 | XDR-TB | lineage1.2.2.2 | None | ERR9993133 | XDR-TB | lineage4.3.3 | None | ERR8975911 | MDR-TB | lineage2.2.1 | None | ERR4808864 | XDR-TB | lineage2.2.2 | za | ERR9993168 | XDR-TB | lineage4.1.1.1 | None | ERR5918116 | XDR-TB | lineage4.1.2.1 | za | SRR9738479 | XDR-TB | lineage4.1.2.1 | None | ERR8975687 | XDR-TB | lineage2.2.2;lineage4.3.2.1 | None | ERR11488964 | XDR-TB | lineage4.3.4.1 | None | ERR10748245 | MDR-TB | lineage4.3.3 | None | ERR9993082 | MDR-TB | lineage2.2.2 | None | SRR22175221 | XDR-TB | lineage2.2.1 | None | ERR9992642 | MDR-TB | lineage1.2.2.2 | None | ERR9992900 | XDR-TB | lineage2.2.2 | None | ERR9992993 | HR-TB | lineage2.2.1 | None | SRR25827819 | XDR-TB | lineage2.2.1.2 | None | ERR5918041 | RR-TB | lineage2.2.1 | None | ERR13286036 | XDR-TB | lineage4.3.3 | None | ERR9993003 | XDR-TB | lineage2.2.2 | None | ERR11068151 | MDR-TB | lineage4.7 | None | SRR30034919 | XDR-TB | lineage4.1.1.2 | None | SRR25827513 | XDR-TB | lineage2.2.1;lineage3 | None | ERR9993033 | MDR-TB | lineage2.2.2 | None | ERR9993086 | XDR-TB | lineage4.1.2.1 | None | ERR13262164 | XDR-TB | lineage3 | None | ERR9992860 | XDR-TB | lineage1.2.2.2 | None | ERR13266551 | XDR-TB | lineage2.2.1 | None | ERR9992640 | XDR-TB | lineage4.4.1.1 | None | ERR9992665 | XDR-TB | lineage2.2.2 | None | ERR13267032 | XDR-TB | lineage2.2.1 | None | ERR9993163 | XDR-TB | lineage2.2.1 | None | ERR9993060 | XDR-TB | lineage2.2.1 | None | ERR13266478 | Other | lineage3 | None | ERR9992816 | RR-TB | lineage2.2.1 | None | SRR29093122 | XDR-TB | lineage2.2.2 | None | ERR9993083 | XDR-TB | lineage4.1.1.3 | None | ERR9993071 | XDR-TB | lineage4.4.1.1 | None | SRR13232613 | XDR-TB | lineage2.2.1 | None | ERR9993004 | XDR-TB | lineage2.2.2 | None | SRR16156282 | XDR-TB | lineage4.1.1.3 | None | ERR13288934 | XDR-TB | lineage4.4.1.1 | None | SRR25827753 | XDR-TB | lineage3 | None | ERR11488994 | MDR-TB | lineage4.3.4.2.1 | None | ERR11488672 | MDR-TB | lineage2.2.1 | None | ERR11488841 | XDR-TB | lineage4.3.4.2.1 | None | ERR9993230 | XDR-TB | lineage4.1.1.3 | None | ERR4831591 | XDR-TB | lineage2.2.2 | None | ERR9992681 | XDR-TB | lineage2.2.2 | None | ERR9993038 | XDR-TB | lineage2.2.2 | None | SRR9028489 | MDR-TB | lineage3 | None | SRR9971180 | XDR-TB | lineage4.3.3 | None | ERR10112903 | XDR-TB | lineage2.2.2 | None | SRR22873603 | XDR-TB | lineage2.2.1 | None | SRR29274250 | MDR-TB | lineage4.8 | None | ERR10112853 | XDR-TB | lineage4.1.1.3 | None | ERR11488965 | MDR-TB | lineage2.2.1 | None | ERR13288935 | XDR-TB | lineage4.1.1.3 | None | SRR6152854 | Other | lineage4.1.2.1 | None | SRR25827669 | XDR-TB | lineage2.2.1;lineage3 | None | ERR11488920 | MDR-TB | lineage2.2.1 | None | ERR11043615 | XDR-TB | lineage4.3.3 | None | ERR9992803 | XDR-TB | lineage2.2.2 | None | SRR28044933 | XDR-TB | lineage2.2.1 | None | SRR29289310 | XDR-TB | lineage3 | None | SRR29289292 | Other | lineage3 | None | ERR13289388 | XDR-TB | lineage4.1.1.3 | None | ERR13276291 | XDR-TB | lineage4.3.3 | None | SRR29289408 | MDR-TB | lineage3.1.2 | None | SRR29289424 | Other | lineage3.1.2.1 | None | SRR24498059 | XDR-TB | lineage3 | None | ERR13267513 | XDR-TB | lineage4.3.3 | None | SRR29289204 | XDR-TB | lineage4.2.2.2 | None | SRR24709898 | XDR-TB | lineage2.2.1 | None | SRR29289259 | RR-TB | lineage3 | None | SRR29289316 | HR-TB | lineage3 | None | SRR29289226 | XDR-TB | lineage3 | None | SRR29289235 | XDR-TB | lineage3 | None | SRR29289208 | XDR-TB | La1.2.BCG | None | SRR29289249 | XDR-TB | lineage3 | None | ERR13276174 | XDR-TB | lineage2.2.1 | None | ERR4798457 | XDR-TB | lineage2.2.1 | in | SRR29539079 | XDR-TB | lineage2.2.1 | None | ERR4799888 | XDR-TB | lineage2.2.1;lineage3 | in | SRR25827542 | XDR-TB | lineage4.4.1.2 | None | ERR9029361 | XDR-TB | lineage2.2.2 | None | SRR29093128 | XDR-TB | lineage2.2.2 | None | ERR13267512 | RR-TB | lineage4.3.3 | None | ERR9993107 | XDR-TB | lineage4.4.1.1 | None | ERR9993241 | XDR-TB | lineage2.2.2 | None | ERR4798248 | MDR-TB | lineage2.2.1.1 | in | ERR9992741 | RR-TB | lineage3.1.1 | None | ERR9993169 | XDR-TB | lineage2.2.2 | None | ERR11068326 | MDR-TB | lineage4.7 | None | SRR29093182 | XDR-TB | lineage2.2.2 | None | SRR25827444 | XDR-TB | lineage3 | None | ERR11043975 | XDR-TB | lineage2.2.1 | None | SRR12882236 | MDR-TB | lineage1.1.3.2 | None | ERR2864225 | XDR-TB | lineage4.3.4.2 | pt | SRR16087909 | MDR-TB | lineage2.2.1 | None | SRR28044702 | XDR-TB | lineage3 | None | SRR28044936 | XDR-TB | lineage3 | None | SRR28498446 | XDR-TB | lineage2.2.1 | None | ERR5918109 | XDR-TB | lineage2.2.1 | za | ERR5918120 | XDR-TB | lineage4.3.3 | za | ERR5918016 | XDR-TB | lineage2.2.1 | za | ERR5918018 | XDR-TB | lineage2.2.1 | za | SRR2024996 | XDR-TB | lineage2.2.1 | cn | ERR5918011 | XDR-TB | lineage2.2.2 | za | ERR9992955 | MDR-TB | lineage1.2.2.2 | None | ERR9992977 | XDR-TB | lineage2.2.2 | None | ERR9993233 | RR-TB | lineage4.4.1.1 | None | ERR11044004 | XDR-TB | lineage2.2.1 | None | ERR4553930 | XDR-TB | lineage2.2.1 | None | ERR10748198 | XDR-TB | lineage2.2.2 | None | ERR9992919 | XDR-TB | lineage1.2.2.2 | None | ERR11488528 | MDR-TB | lineage4.3.3 | None | SRR28351357 | XDR-TB | lineage2.2.1 | None | SRR28858755 | XDR-TB | lineage4.3.4.1 | None | ERR13262168 | XDR-TB | lineage2.2.1 | None | ERR13264946 | Other | lineage3 | None | ERR13266517 | XDR-TB | lineage2.2.1 | None | ERR11067627 | XDR-TB | lineage2.2.1 | None | SRR22175220 | XDR-TB | lineage2.2.1 | None | SRR25827799 | XDR-TB | lineage4.8 | None | SRR28045460 | XDR-TB | lineage2.2.1 | None | ERR9992958 | XDR-TB | lineage2.2.2 | None | ERR10748352 | XDR-TB | lineage2.2.2 | None | ERR13289273 | XDR-TB | lineage2.2.2 | None | ERR9030318 | MDR-TB | lineage2.2.1 | None | ERR4797311 | XDR-TB | lineage2.2.1.1;lineage3 | in | SRR28044932 | XDR-TB | lineage3 | None | ERR4797181 | XDR-TB | lineage3 | in | ERR4796328 | XDR-TB | lineage2.2.1 | in | ERR13289357 | XDR-TB | lineage2.2.2 | None | ERR13288797 | XDR-TB | lineage2.2.2 | None | ERR13289382 | XDR-TB | lineage2.2.2 | None | ERR9993202 | XDR-TB | lineage2.2.1.1 | None | ERR13289274 | XDR-TB | lineage4.4.1.1 | None | ERR13288799 | HR-TB | lineage2.2.1.1 | None | ERR9993088 | MDR-TB | lineage4.1.1.3 | None | ERR9992956 | XDR-TB | lineage2.2.2 | None | ERR9992925 | XDR-TB | lineage1.2.2.2 | None | ERR9993195 | XDR-TB | lineage2.2.2 | None | ERR9992827 | MDR-TB | lineage4.3.3 | None | ERR13288926 | MDR-TB | lineage2.2.2 | None | ERR9992780 | XDR-TB | lineage2.2.1.1 | None | ERR9993149 | HR-TB | lineage4.4.1.1 | None | ERR13286038 | XDR-TB | lineage4.1.2.1 | None | ERR13288788 | XDR-TB | lineage4.4.1.1 | None | ERR9993002 | MDR-TB | lineage2.2.2 | None | ERR9992831 | XDR-TB | lineage2.2.1 | None | ERR13288791 | XDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR9992846 | XDR-TB | lineage2.2.2 | None | ERR9992825 | XDR-TB | lineage1.2.2.2 | None | ERR9993248 | RR-TB | lineage2.2.1 | None | ERR9992959 | XDR-TB | lineage2.2.2 | None | ERR9992703 | XDR-TB | lineage2.2.2 | None | ERR13288928 | MDR-TB | lineage2.2.1 | None | ERR9992901 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | ERR9992963 | XDR-TB | lineage1.2.2.2 | None | ERR13289264 | XDR-TB | lineage4.4.1.1.1 | None | ERR13288954 | XDR-TB | lineage2.2.1 | None | ERR9992890 | MDR-TB | lineage4.4.1.1 | None | ERR13288929 | XDR-TB | lineage2.2.2 | None | ERR9992715 | XDR-TB | lineage2.2.2 | None | ERR9992632 | XDR-TB | lineage4.4.1.1 | None | ERR9992965 | XDR-TB | lineage2.2.1 | None | ERR9993068 | XDR-TB | lineage2.2.1 | None | ERR9992699 | XDR-TB | lineage2.2.2 | None | ERR9993098 | XDR-TB | lineage2.2.2 | None | ERR9993152 | RR-TB | lineage2.2.1 | None | ERR9992706 | XDR-TB | lineage2.2.2 | None | SRR25827540 | XDR-TB | lineage2.2.1 | None | ERR8976013 | MDR-TB | lineage4.3.3 | None | ERR8975716 | RR-TB | lineage3 | None | ERR8976014 | XDR-TB | lineage2.2.2 | None | ERR8975949 | XDR-TB | lineage2.2.2 | None | ERR8976047 | XDR-TB | lineage2.2.1 | None | ERR8975648 | XDR-TB | lineage2.2.1 | None | ERR5918020 | XDR-TB | lineage2.2.1 | za | ERR11488685 | MDR-TB | lineage2.2.1 | None | ERR13112017 | XDR-TB | lineage3 | None | ERR9030331 | XDR-TB | lineage2.2.2 | None | ERR2510504 | XDR-TB | lineage3 | pk | ERR8975808 | XDR-TB | lineage2.2.1 | None | ERR8975976 | XDR-TB | lineage2.2.2 | None | ERR9992932 | XDR-TB | lineage1.2.2.2 | None | ERR11774884 | XDR-TB | lineage2.2.2 | None | ERR13288927 | XDR-TB | lineage2.2.2 | None | SRR28045569 | MDR-TB | lineage2.2.1 | None | ERR9993005 | XDR-TB | lineage2.2.2 | None | SRR25207014 | MDR-TB | lineage2.2.1.1 | None | SRR22175172 | XDR-TB | lineage2.2.1 | None | ERR13260884 | XDR-TB | lineage2.2.2 | None | ERR13288851 | XDR-TB | lineage2.2.1 | None | ERR13288832 | XDR-TB | lineage2.2.1 | None | ERR9992736 | XDR-TB | lineage2.2.2 | None | ERR9992742 | XDR-TB | lineage2.2.2 | None | ERR9992668 | XDR-TB | lineage4.4.1.1 | None | SRR7131091 | Other | lineage4.1.2 | None | ERR11081152 | XDR-TB | lineage4.3.3 | None | SRR9028476 | Other | lineage3 | None | SRR9971285 | XDR-TB | lineage4.3.3 | None | ERR13260861 | RR-TB | lineage2.2.1.1 | None | ERR13267514 | XDR-TB | lineage4.3.3 | None | SRR29539251 | HR-TB | lineage2.2.1 | None | ERR11081809 | XDR-TB | lineage4.3.3 | None | ERR13288920 | XDR-TB | lineage4.1.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR9993171 | XDR-TB | lineage2.2.2 | None | ERR13276236 | XDR-TB | lineage2.2.1 | None | SRR29017397 | XDR-TB | lineage2.2.1 | None | ERR9992992 | XDR-TB | lineage4.4.1.1.1 | None | ERR13266912 | XDR-TB | lineage2.2.1 | None | SRR10040250 | XDR-TB | lineage2.2.2 | None | ERR9992755 | RR-TB | lineage4.8 | None | SRR28858513 | MDR-TB | lineage4.2.1.1 | None | ERR13261164 | XDR-TB | lineage2.2.1 | None | ERR13266714 | XDR-TB | lineage3 | None | ERR13266820 | XDR-TB | lineage3 | None | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | ERR9992980 | XDR-TB | lineage2.2.1 | None | ERR13266509 | XDR-TB | lineage2.2.1 | None | ERR13260903 | XDR-TB | lineage1.2.2.2 | None | ERR9992752 | XDR-TB | lineage2.2.1 | None | ERR9992947 | MDR-TB | lineage4.3.2.1 | None | SRR29093916 | XDR-TB | lineage2.2.2 | None | SRR25827640 | XDR-TB | lineage2.2.1 | None | SRR9971179 | XDR-TB | lineage4.3.3 | None | SRR18002973 | XDR-TB | lineage2.2.1 | None | SRR29539852 | XDR-TB | lineage2.2.1 | None | SRR29289160 | MDR-TB | lineage3 | None | ERR9993204 | MDR-TB | lineage2.2.2 | None | ERR4797884 | XDR-TB | lineage2.2.1;lineage3.1.2.1 | in | ERR2510818 | Other | lineage4.1.2 | it | SRR29273876 | XDR-TB | lineage4.1.2.1 | None | ERR9992898 | XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | ERR10748267 | XDR-TB | lineage2.2.2 | None | ERR1352350 | XDR-TB | lineage2.2.1 | cn | ERR4797898 | XDR-TB | lineage2.2.1 | in | SRR10869039 | XDR-TB | lineage2.2.2 | None | ERR11044250 | XDR-TB | lineage2.2.1 | None | ERR13276389 | XDR-TB | lineage4.3.3 | None | SRR29681413 | MDR-TB | lineage2.2.1 | None | ERR4830559 | XDR-TB | lineage4.3.3 | None | SRR13232759 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR29539579 | MDR-TB | lineage2.2.1 | None | ERR9992638 | XDR-TB | lineage4.1.1.3 | None | SRR25827366 | XDR-TB | lineage2.2.1 | None | ERR10748466 | XDR-TB | lineage2.2.1 | None | ERR13267129 | XDR-TB | lineage2.2.1 | None | ERR11774882 | XDR-TB | lineage2.2.2 | None | SRR25827800 | MDR-TB | lineage1.1.2 | None | SRR28888065 | XDR-TB | lineage2.2.1 | None | SRR25827593 | XDR-TB | lineage1.1.2 | None | ERR9992627 | XDR-TB | lineage4.4.1.1 | None | SRR28498673 | XDR-TB | lineage2.2.1 | None | ERR5917970 | XDR-TB | lineage4.3.3 | za | ERR9992933 | XDR-TB | lineage2.2.1 | None | SRR28706518 | XDR-TB | lineage2.2.1 | None | ERR5917986 | XDR-TB | lineage2.2.2 | za | SRR28498451 | XDR-TB | lineage2.2.1 | None | SRR28888078 | XDR-TB | lineage2.2.1 | None | ERR5918012 | XDR-TB | lineage2.2.1 | za | ERR4831253 | XDR-TB | lineage2.2.1 | de | ERR4830558 | XDR-TB | lineage4.3.3 | None | ERR8665955 | XDR-TB | lineage2.2.1 | None | ERR4831425 | Other | lineage3 | None | ERR9993057 | XDR-TB | lineage1.2.2.2 | None | ERR9993139 | XDR-TB | lineage2.2.1 | None | SRR28044922 | XDR-TB | lineage3 | None | ERR8975671 | MDR-TB | lineage2.2.1 | None | ERR8975777 | MDR-TB | lineage4.1.1.3 | None | ERR10748167 | MDR-TB | lineage4.3.3 | None | ERR8975914 | MDR-TB | lineage4.3.3 | None | SRR7341698 | MDR-TB | lineage4.4.1.1 | ro | ERR2677416 | XDR-TB | lineage4.3.3 | de | ERR9992943 | RR-TB | lineage2.2.1.1 | None | ERR10748550 | XDR-TB | lineage2.2.1 | None | SRR28888063 | XDR-TB | lineage2.2.1 | None | ERR10112905 | MDR-TB | lineage2.2.1 | None | ERR13276320 | XDR-TB | lineage4.3.3 | None | SRR25827591 | XDR-TB | lineage1.1.2 | None | ERR13260860 | XDR-TB | lineage2.2.1 | None | ERR9992655 | XDR-TB | lineage4.8.1 | None | ERR9992694 | XDR-TB | lineage2.2.1 | None | ERR9992984 | MDR-TB | lineage2.2.2 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR23862102 | MDR-TB | lineage2.2.1 | None | SRR25207055 | XDR-TB | lineage2.2.1.1 | None | ERR11068441 | MDR-TB | lineage4.7 | None | ERR10748498 | XDR-TB | lineage4.3.3 | None | SRR9028485 | Other | lineage3 | None | SRR22175200 | XDR-TB | lineage2.2.1.1 | None | ERR9992862 | XDR-TB | lineage2.2.2 | None | SRR24256150 | MDR-TB | lineage4.2.1 | None | ERR9993121 | XDR-TB | lineage4.1.1.3 | None | SRR29017391 | XDR-TB | lineage2.2.1 | None | ERR9992688 | XDR-TB | lineage2.2.2 | None | ERR9992663 | XDR-TB | lineage4.1.1.3 | None | ERR9993201 | XDR-TB | lineage2.2.2 | None | ERR9993062 | XDR-TB | lineage1.2.2.2 | None | ERR9992983 | XDR-TB | lineage4.4.1.1 | None | ERR9992813 | XDR-TB | lineage2.2.2 | None | ERR4798617 | XDR-TB | lineage2.2.1 | in | ERR4799131 | HR-TB | lineage2.2.1 | in | ERR4799508 | XDR-TB | lineage2.2.1 | in | ERR4800476 | XDR-TB | lineage2.2.1.1 | in | ERR9993129 | XDR-TB | lineage4.4.1.1 | None | ERR9992650 | MDR-TB | lineage2.2.1 | None | ERR9992731 | XDR-TB | lineage2.2.2 | None | ERR9992949 | XDR-TB | lineage1.2.2.2 | None | ERR9992708 | XDR-TB | lineage4.1.1.3 | None | ERR9992779 | XDR-TB | lineage4.3.2.1 | None | ERR4553946 | XDR-TB | lineage2.2.1 | None | ERR9993150 | MDR-TB | lineage2.2.1 | None | ERR9992788 | RR-TB | lineage2.2.1 | None | ERR9993124 | MDR-TB | lineage4.8 | None | ERR9993125 | MDR-TB | lineage4.8.1 | None | ERR9992970 | XDR-TB | lineage2.2.2 | None | SRR25207181 | XDR-TB | lineage2.2.1.1 | None | ERR2515541 | XDR-TB | lineage2.2.2 | za | ERR8975916 | XDR-TB | lineage2.2.2 | None | ERR8975688 | XDR-TB | lineage4.4.1.1 | None | SRR28888070 | XDR-TB | lineage2.2.1 | None | ERR11488679 | MDR-TB | lineage4.1.2.1 | None | ERR11773723 | XDR-TB | lineage2.2.2 | None | SRR29017560 | XDR-TB | lineage3 | None | ERR4822324 | XDR-TB | lineage4.3.3 | de | ERR4822599 | XDR-TB | lineage4.3.3 | de | ERR4822600 | XDR-TB | lineage4.3.3 | de | SRR12142336 | MDR-TB | lineage2.2.1 | None | ERR11044658 | XDR-TB | lineage2.2.1 | None | SRR28045455 | XDR-TB | lineage3 | None | SRR20632777 | XDR-TB | lineage2.2.1 | None | SRR26331591 | XDR-TB | lineage2.2.1 | None | SRR25207110 | XDR-TB | lineage2.2.1 | None | ERR4276886 | XDR-TB | lineage2.2.1 | None | ERR13261509 | MDR-TB | lineage3 | None | ERR13262011 | XDR-TB | lineage2.2.1 | None | SRR28498648 | MDR-TB | lineage2.2.1 | None | ERR9992986 | XDR-TB | lineage1.2.2.2 | None | ERR9993055 | XDR-TB | lineage2.2.1 | None | ERR13260941 | XDR-TB | lineage2.2.1 | None | ERR13262015 | XDR-TB | lineage4.2.2.2 | None | ERR10112902 | XDR-TB | lineage2.2.2 | None | SRR29093120 | XDR-TB | lineage2.2.2 | None | ERR9992721 | XDR-TB | lineage2.2.2 | None | SRR29093955 | XDR-TB | lineage2.2.2 | None | ERR9992795 | XDR-TB | lineage2.2.2 | None | SRR25827482 | XDR-TB | lineage2.2.1 | None | ERR9992889 | XDR-TB | lineage1.2.2.2 | None | ERR10748262 | MDR-TB | lineage2.2.1 | None | ERR4831593 | XDR-TB | lineage2.2.2 | None | SRR25827295 | XDR-TB | lineage4.8 | None | ERR13288888 | XDR-TB | lineage2.2.2 | None | ERR13260858 | MDR-TB | lineage4.4.1.1 | None | ERR9992684 | XDR-TB | lineage2.2.2 | None | SRR25827590 | HR-TB | lineage1.1.2 | None | ERR9992814 | RR-TB | lineage2.2.1 | None | ERR11488629 | MDR-TB | lineage2.2.1 | None | ERR9992624 | XDR-TB | lineage4.4.1.1.1 | None | SRR22175219 | XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | SRR28888067 | XDR-TB | lineage2.2.1 | None | ERR13266990 | XDR-TB | lineage2.2.1 | None | ERR9993084 | XDR-TB | lineage4.3.2.1 | None | SRR28351161 | XDR-TB | lineage2.2.1 | None | SRR25827487 | XDR-TB | lineage2.2.1;lineage3 | None | ERR10748330 | MDR-TB | lineage2.2.1 | None | SRR25827888 | XDR-TB | lineage1.1.3.1;lineage2.2.1 | None | ERR13267511 | RR-TB | lineage4.3.3 | None | ERR13288956 | XDR-TB | lineage2.2.2 | None | SRR14782567 | XDR-TB | lineage2.2.1 | None | ERR13260442 | RR-TB | lineage2.2.1.1 | None | SRR22873604 | XDR-TB | lineage2.2.1 | None | ERR9993164 | XDR-TB | lineage2.2.2 | None | SRR25827370 | MDR-TB | lineage2.2.1;lineage3 | None | ERR13266035 | MDR-TB | lineage2.2.1 | None | ERR9992654 | XDR-TB | lineage4.3.3 | None | ERR10748249 | MDR-TB | lineage4.3.3 | None | ERR13288958 | XDR-TB | lineage4.3.3 | None | ERR13289405 | XDR-TB | lineage2.2.2 | None | SRR29289148 | MDR-TB | lineage3 | None | SRR29289149 | MDR-TB | lineage3 | None | ERR3335725 | RR-TB | lineage3 | pk | SRR29289283 | XDR-TB | lineage3 | None | SRR29289269 | MDR-TB | lineage3 | None | SRR29289290 | Other | lineage3 | None | SRR29289150 | MDR-TB | lineage3 | None | SRR29289153 | XDR-TB | lineage1.2.2.2 | None | SRR29289154 | XDR-TB | lineage3 | None | ERR13288937 | MDR-TB | lineage4.1.1.3 | None | SRR29289282 | XDR-TB | lineage3 | None | SRR29289288 | MDR-TB | lineage3 | None | SRR29289300 | XDR-TB | lineage2.2.1 | None | SRR29289421 | XDR-TB | lineage3 | None | SRR29289111 | XDR-TB | lineage3 | None | SRR29289125 | HR-TB | lineage3 | None | SRR29289127 | XDR-TB | lineage3 | None | SRR29289137 | XDR-TB | lineage3 | None | SRR29289207 | XDR-TB | lineage3 | None | SRR29289216 | XDR-TB | lineage3 | None | SRR29289231 | HR-TB | lineage3 | None | SRR29289241 | XDR-TB | lineage3 | None | SRR29289254 | Other | lineage3 | None | ERR3148169 | XDR-TB | lineage4.1.2.1 | mx | ERR4796976 | XDR-TB | lineage4.2.2.2 | in | ERR9992764 | XDR-TB | lineage1.2.2.2 | None | ERR9993008 | XDR-TB | lineage2.2.1 | None | ERR13288994 | MDR-TB | lineage2.2.1 | None | SRR24710145 | XDR-TB | lineage2.2.1 | None | ERR4799259 | XDR-TB | lineage2.2.1 | in | ERR13266036 | MDR-TB | lineage2.2.1 | None | ERR9992944 | XDR-TB | lineage2.2.2 | None | ERR9993262 | XDR-TB | lineage2.2.2 | None | ERR13260870 | HR-TB | lineage4.1.2 | None | ERR9992941 | MDR-TB | lineage4.3.3 | None | SRR28498375 | XDR-TB | lineage2.2.1 | None | ERR4797885 | XDR-TB | lineage2.2.1 | None | SRR28044949 | XDR-TB | lineage2.2.1 | None | SRR28045908 | XDR-TB | lineage2.2.1 | None | SRR28351354 | XDR-TB | lineage2.2.1 | None | SRR28044686 | XDR-TB | lineage2.2.1 | None | SRR28045577 | XDR-TB | lineage2.2.1 | None | ERR4872271 | XDR-TB | lineage2.2.1 | None |
|---|
