Rv0678 - c.19delG
Drug resistance types
4 Sensitive
0 RR-TB
1 HR-TB
10 MDR-TB
19 Pre-XDR-TB
2 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 18 |
| lineage3 | 3 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.2 | 9 |
| lineage4.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 39 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4872319 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829132 | MDR-TB | lineage3 | pk | ERR4872146 | MDR-TB | lineage4.2.2.2 | None | ERR2677436 | MDR-TB | lineage2.2.1 | de | SRR6824493 | MDR-TB | lineage2.2.1.1 | cn | ERR10748168 | Sensitive | lineage1.1.3.2 | None | ERR10748089 | Pre-XDR-TB | lineage2.2.2 | None | ERR3957930 | Sensitive | lineage4.1.1 | None | ERR9119550 | MDR-TB | lineage4.2.2.2 | None | ERR5918009 | Pre-XDR-TB | lineage2.2.2 | za | ERR4798677 | XDR-TB | lineage2.2.1 | in | ERR4800321 | Pre-XDR-TB | lineage2.2.1 | in | ERR4811321 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5864891 | Pre-XDR-TB | lineage4.8 | None | ERR5979670 | Sensitive | lineage4.9 | None | SRR10379886 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993017 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9993063 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992767 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992882 | HR-TB | lineage2.2.1 | None | ERR9992954 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993048 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993159 | XDR-TB | lineage2.2.2 | None | SRR14782160 | Pre-XDR-TB | lineage2.2.1 | None | SRR12080284 | MDR-TB | lineage2.2.1 | None | SRR12080302 | MDR-TB | lineage2.2.1 | None | SRR14088348 | MDR-TB | lineage3 | None | SRR12080291 | MDR-TB | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR14802216 | Pre-XDR-TB | lineage2.2.1 | None | SRR22351877 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424838 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081428 | MDR-TB | lineage2.2.1 | None | SRR23938670 | Pre-XDR-TB | lineage2.2.1 | None | SRR23691394 | Sensitive | lineage2.2.2 | None | ERR10112843 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR21887755 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816437 | Other | lineage3 | gb | SRR1723422 | Other | lineage2.2.2 | cn |
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