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SRA data
Rv0678
- c.291delC
Drug resistance types
0 Sensitive
4 RR-TB
1 HR-TB
1 MDR-TB
0 Pre-XDR-TB
16 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
9
lineage3
7
lineage2.2.2
5
lineage1.1.2
1
lineage4.2.2.2
1
Showing 1 to 5 of 5 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
23
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10112850
XDR-TB
lineage2.2.1
None
ERR12916909
XDR-TB
lineage2.2.1
None
ERR12916919
XDR-TB
lineage2.2.1
None
ERR12916920
XDR-TB
lineage2.2.1
None
ERR13286037
RR-TB
lineage3
None
ERR13288831
RR-TB
lineage3
None
ERR4798843
XDR-TB
lineage4.2.2.2
in
ERR5918105
RR-TB
lineage3
za
ERR8975757
RR-TB
lineage3
None
ERR9993078
XDR-TB
lineage3
None
Showing 1 to 10 of 23 entries
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