lineage | Count |
---|---|
lineage4.4.1.1 | 2 |
lineage4 | 4 |
lineage2.2.1 | 14 |
lineage3 | 35 |
lineage3.1.2.1 | 1 |
lineage1.1.3.1 | 2 |
lineage4.1.3 | 1 |
lineage2.2.2 | 6 |
lineage4.2.2 | 5 |
lineage4.5 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
lineage6.1.3 | 1 |
lineage3.1.3 | 1 |
lineage4.1.1 | 1 |
lineage4.3.4.2 | 2 |
1 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | ERR11488670 | MDR-TB | lineage4.4.1.1 | None | SRR1048882 | XDR-TB | lineage4 | None | ERR4811646 | MDR-TB | lineage2.2.1 | cn | SRR29289328 | Other | lineage3 | None | SRR24114355 | MDR-TB | lineage3.1.2.1 | None | ERR4553892 | MDR-TB | lineage1.1.3.1 | None | SRR3724807 | MDR-TB | lineage4.1.3 | ci | SRR29289386 | MDR-TB | lineage3 | None | ERR4821998 | Other | lineage3 | gb | SRR25389478 | XDR-TB | lineage2.2.2 | None | SRR5535719 | MDR-TB | lineage4.2.2 | None | ERR11080927 | Other | lineage3 | None | SRR25389479 | XDR-TB | lineage2.2.2 | None | ERR9993106 | XDR-TB | lineage2.2.1 | None | ERR4797755 | MDR-TB | lineage3 | in | SRR28044347 | XDR-TB | lineage3 | None | SRR11662499 | MDR-TB | lineage4.2.2 | None | SRR28046074 | Other | lineage3 | None | SRR28045537 | Other | lineage3 | None | ERR4799736 | Other | lineage3 | in | ERR9992775 | MDR-TB | lineage2.2.2 | None | SRR30182843 | Other | lineage4.5 | None | SRR29017698 | Other | lineage3 | None | ERR4799644 | XDR-TB | lineage3 | in | ERR4809075 | XDR-TB | lineage2.2.2 | za | ERR4816776 | Other | lineage3 | None | SRR28045698 | HR-TB | lineage3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR13266701 | Other | lineage3 | None | SRR2100843 | HR-TB | lineage3 | None | SRR6832290 | MDR-TB | lineage2.2.1 | None | SRR22251159 | Other | lineage2.2.1 | None | ERR270735 | HR-TB | lineage3 | None | ERR4817041 | Other | lineage3 | gb | SRR25207129 | MDR-TB | lineage2.2.1 | None | ERR12554832 | Other | lineage3 | None | SRR5709841 | MDR-TB | lineage4.2.2 | th | ERR1023290 | Other | lineage6.1.3 | None | SRR22873594 | MDR-TB | lineage2.2.1 | None | SRR28044421 | MDR-TB | lineage3 | None | SRR5894881 | MDR-TB | lineage2.2.1 | None | ERR4820883 | Other | lineage3 | None | ERR4829858 | Other | lineage3 | it | SRR29289384 | RR-TB | lineage3 | None | ERR2514593 | Other | lineage3.1.3 | gb | SRR28923841 | XDR-TB | lineage2.2.1 | None | ERR12916916 | XDR-TB | lineage2.2.1 | None | SRR26056466 | MDR-TB | lineage3 | None | SRR25389480 | XDR-TB | lineage2.2.2 | None | ERR4829897 | Other | lineage3 | None | SRR11662312 | MDR-TB | lineage4.2.2 | None | SRR6152969 | Other | lineage3 | ca | SRR25389477 | XDR-TB | lineage2.2.2 | None | ERR10748148 | XDR-TB | lineage2.2.1 | None | SRR28044622 | MDR-TB | lineage3 | None | ERR4817942 | Other | lineage3 | None | SRR28044397 | XDR-TB | lineage3 | None | SRR1048881 | XDR-TB | lineage4 | None | SRR13870419 | XDR-TB | lineage4.1.1 | None | ERR4822394 | XDR-TB | lineage2.2.1 | kg | SRR6153031 | Other | lineage3 | ca | SRR29016841 | MDR-TB | lineage1.1.3.1 | None | SRR1013576 | XDR-TB | lineage4 | None | ERR11488390 | MDR-TB | lineage4.4.1.1 | None | ERR1034884 | XDR-TB | lineage4.3.4.2 | pt | SAMN02360567 | XDR-TB | lineage4 | kr | SRR6484938 | HR-TB | lineage2.2.1 | None | ERR4800370 | Other | lineage3 | in | ERR4829941 | MDR-TB | lineage3 | pk | ERR4553986 | Other | None | SRR21887690 | XDR-TB | lineage2.2.1 | None | SRR28045695 | Other | lineage3 | None | SRR11662236 | MDR-TB | lineage4.2.2 | None | SRR29440785 | MDR-TB | lineage2.2.1 | None | ERR550699 | Other | lineage3 | de | SRR6964599 | XDR-TB | lineage3 | None | ERR1034871 | XDR-TB | lineage4.3.4.2 | pt | SRR27450314 | Other | lineage3 | None |
---|