Rv0682 - c.117C>T
Drug resistance types
156 Sensitive
1 RR-TB
23 HR-TB
51 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 55 |
| lineage4.3.3 | 36 |
| lineage4.3.4.2.1 | 17 |
| lineage4.3.2.1 | 7 |
| lineage3 | 12 |
| lineage4.3.4.2 | 3 |
| lineage4.6.1.2 | 7 |
| lineage4.1.2.1 | 25 |
| lineage3.1 | 1 |
| lineage2.2.1 | 63 |
| lineage3.1.2 | 3 |
| lineage4 | 4 |
| lineage5.1.3 | 2 |
| lineage4.3.2 | 6 |
| lineage4.4.1.1 | 7 |
| lineage4.6.1.2;lineage4.2.2.2 | 1 |
| lineage4.6.1.2;lineage4.6.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.8;lineage4.3.3 | 1 |
| lineage4.5 | 2 |
| lineage4.1.2 | 1 |
| lineage4.3.4.2.1;lineage4.1.1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.3;lineage4.1.2;lineage4.1.1 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 263 |
Geographic prevalence
Country level data for this variant is available for 107 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2446318 | Sensitive | lineage4.8 | nl | ERR3132212 | HR-TB | lineage4.3.3 | None | ERR040132 | MDR-TB | lineage4.3.3 | ug | ERR323049 | Sensitive | lineage4.3.4.2.1 | mw | SRR6982534 | Sensitive | lineage4.3.2.1 | None | SRR7585417 | Other | lineage4.8 | in | ERR11049059 | HR-TB | lineage3 | None | ERR1035304 | MDR-TB | lineage4.3.3 | br | ERR1035283 | MDR-TB | lineage4.3.3 | br | ERR11049096 | Sensitive | lineage4.3.4.2 | None | ERR1035323 | MDR-TB | lineage4.3.3 | br | ERR10465791 | Other | lineage4.8 | None | ERR11044785 | Sensitive | lineage4.8 | None | ERR11043945 | Sensitive | lineage4.8 | None | ERR11044087 | Sensitive | lineage4.8 | None | ERR10969132 | Sensitive | lineage4.3.3 | None | ERR11044257 | MDR-TB | lineage4.8 | None | ERR1193693 | HR-TB | lineage4.3.3 | cg | ERR11044896 | HR-TB | lineage3 | None | ERR1193847 | Sensitive | lineage4.3.3 | cg | ERR1193855 | Sensitive | lineage4.3.3 | ga | ERR1193846 | Sensitive | lineage4.3.3 | cg | ERR1193848 | Sensitive | lineage4.3.3 | cg | ERR1193845 | Sensitive | lineage4.3.3 | cg | ERR1199150 | HR-TB | lineage4.6.1.2 | ug | ERR1199097 | MDR-TB | lineage4.6.1.2 | ug | ERR144592 | Sensitive | lineage4.8 | ru | ERR1199140 | HR-TB | lineage4.6.1.2 | ug | ERR387016 | Sensitive | lineage4.3.4.2.1 | None | ERR386979 | Sensitive | lineage3 | None | ERR3470635 | Sensitive | lineage4.8 | None | ERR3639812 | MDR-TB | lineage4.8 | None | ERR4012000 | MDR-TB | lineage4.3.4.2.1 | None | ERR387024 | Sensitive | lineage3 | None | ERR3994117 | Other | lineage4.1.2.1 | None | ERR4195754 | Sensitive | lineage4.1.2.1 | None | ERR4195444 | Sensitive | lineage4.1.2.1 | None | ERR4799458 | Sensitive | lineage3.1 | in | ERR4407474 | Other | lineage2.2.1 | None | ERR4797042 | MDR-TB | lineage3.1.2 | in | ERR11049577 | Sensitive | lineage4.1.2.1 | None | ERR4799817 | HR-TB | lineage4.8 | in | ERR4810582 | Sensitive | lineage2.2.1 | cn | ERR4810598 | Sensitive | lineage2.2.1 | cn | ERR4810558 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810562 | HR-TB | lineage2.2.1 | cn | ERR4811097 | Sensitive | lineage2.2.1 | cn | ERR4810923 | Sensitive | lineage2.2.1 | cn | ERR4810680 | Sensitive | lineage2.2.1 | cn | ERR4810681 | Sensitive | lineage2.2.1 | cn | ERR4810682 | Sensitive | lineage2.2.1 | cn | ERR4811220 | Sensitive | lineage2.2.1 | cn | ERR4811117 | Sensitive | lineage2.2.1 | cn | ERR4811351 | MDR-TB | lineage2.2.1 | cn | ERR4811237 | HR-TB | lineage2.2.1 | None | ERR4811373 | Sensitive | lineage2.2.1 | None | ERR4811851 | Sensitive | lineage4 | None | ERR4811646 | MDR-TB | lineage2.2.1 | cn | ERR702409 | Sensitive | lineage5.1.3 | gh | ERR4812469 | Sensitive | lineage4.1.2.1 | pe | ERR5918058 | HR-TB | lineage4.3.2.1 | za | ERR6397174 | MDR-TB | lineage4.1.2.1 | None | ERR6397167 | MDR-TB | lineage4.1.2.1 | None | ERR6397203 | MDR-TB | lineage4.1.2.1 | None | ERR6866198 | Sensitive | lineage4.8 | None | ERR7910986 | MDR-TB | lineage4.3.2 | None | ERR11049948 | Sensitive | lineage4.8 | None | ERR751310 | Sensitive | lineage5.1.3 | None | ERR751524 | HR-TB | lineage4.3.2 | pe | ERR7910987 | MDR-TB | lineage4.3.2 | None | ERR8774409 | Sensitive | lineage4.3.4.2 | None | ERR7911517 | MDR-TB | lineage2.2.1 | vn | ERR9121306 | Sensitive | lineage4.1.2.1 | None | ERR8975425 | HR-TB | lineage4.3.2.1 | None | ERR9125554 | Other | lineage2.2.1 | None | ERR9121305 | Sensitive | lineage4.1.2.1 | None | ERR9634318 | Sensitive | lineage4.4.1.1 | None | ERR9285883 | Sensitive | lineage4.8 | None | ERR9634287 | Sensitive | lineage4.4.1.1 | None | ERR987725 | HR-TB | lineage4.6.1.2 | None | ERR9634323 | Sensitive | lineage4.4.1.1 | None | ERR987751 | MDR-TB | lineage4.6.1.2;lineage4.2.2.2 | None | ERR9899697 | Sensitive | lineage4.8 | None | SRR10808657 | Sensitive | lineage4.4.1.1 | None | SRR10305694 | HR-TB | lineage2.2.1 | None | ERR9899685 | Sensitive | lineage4.8 | None | SRR10809142 | Sensitive | lineage4.4.1.1 | None | SRR10809118 | Sensitive | lineage4.4.1.1 | None | SRR1166922 | MDR-TB | lineage4.8 | None | SRR1162720 | MDR-TB | lineage4.8 | None | SRR1165544 | MDR-TB | lineage4 | None | SRR1162828 | MDR-TB | lineage4.8 | None | SRR1165512 | MDR-TB | lineage4.8 | None | SRR1165592 | MDR-TB | lineage4.8 | None | SRR1165600 | MDR-TB | lineage4 | None | SRR1166710 | MDR-TB | lineage4.8 | None | ERR11050432 | Sensitive | lineage4.8 | None | SRR12634629 | Sensitive | lineage4.6.1.2 | None | ERR11050433 | Sensitive | lineage4.8 | None | SRR12634547 | Sensitive | lineage4.6.1.2;lineage4.6.1.1 | None | SRR12634627 | Sensitive | lineage4.6.1.2 | None | SRR13591383 | Sensitive | lineage4.3.3 | None | SRR14782585 | Sensitive | lineage4.8 | None | SRR14519843 | Sensitive | lineage3 | None | SRR13591445 | Sensitive | lineage4.3.4.1 | None | SRR15316155 | Sensitive | lineage2.2.1 | None | SRR14801600 | Sensitive | lineage4.8 | None | SRR14802161 | Sensitive | lineage4.8 | None | ERR11050599 | Sensitive | lineage4.3.3 | None | SRR15315740 | MDR-TB | lineage2.2.1 | None | SRR15316590 | MDR-TB | lineage2.2.1 | None | SRR15368730 | Sensitive | lineage2.2.1 | None | SRR15723032 | Sensitive | lineage2.2.1 | None | SRR15368788 | MDR-TB | lineage2.2.1 | None | SRR15722971 | Other | lineage2.2.1 | None | SRR16058551 | Other | lineage2.2.1 | None | SRR15723307 | Sensitive | lineage2.2.1 | None | SRR15723309 | Sensitive | lineage2.2.1 | None | SRR16370363 | Sensitive | lineage4.3.4.2 | None | ERR11050676 | Sensitive | lineage4.8 | None | SRR16149145 | MDR-TB | lineage4.2.2.1 | None | SRR1710087 | Sensitive | lineage2.2.1 | cn | SRR17688576 | Sensitive | lineage2.2.1 | None | SRR17712075 | Sensitive | lineage2.2.1 | None | SRR18548948 | Sensitive | lineage2.2.1 | None | SRR18002931 | Sensitive | lineage2.2.1 | None | SRR18003036 | Other | lineage2.2.1 | None | SRR18213812 | Sensitive | lineage4.3.4.2.1 | None | SRR18495590 | Sensitive | lineage2.2.1 | None | SRR18511631 | Sensitive | lineage2.2.1 | None | SRR18914232 | Sensitive | lineage4.1.1 | None | SRR18715352 | HR-TB | lineage4.8;lineage4.3.3 | None | SRR19612247 | Sensitive | lineage2.2.1 | None | SRR20969569 | Sensitive | lineage2.2.1 | None | SRR20139557 | MDR-TB | lineage4.8 | None | SRR20969806 | Sensitive | lineage2.2.1 | None | SRR20969662 | Sensitive | lineage2.2.1 | None | SRR2100997 | Sensitive | lineage4.1.2.1 | None | SRR2099946 | Sensitive | lineage4.5 | None | SRR2101015 | Sensitive | lineage4.3.4.2.1 | None | SRR2101342 | HR-TB | lineage4.3.2.1 | None | SRR2101031 | Sensitive | lineage3 | None | SRR2101419 | Sensitive | lineage4.3.4.2.1 | None | SRR2101447 | Sensitive | lineage4.3.4.2.1 | None | SRR2101503 | Sensitive | lineage4.3.2.1 | None | SRR21663283 | Sensitive | lineage4.3.3 | None | SRR21277394 | Sensitive | lineage2.2.1 | None | SRR21279416 | Sensitive | lineage2.2.1 | None | SRR21277857 | MDR-TB | lineage2.2.1 | None | SRR21663282 | Sensitive | lineage4.8 | None | SRR22175180 | MDR-TB | lineage3.1.2 | None | SRR21663275 | Sensitive | lineage2.2.1 | None | SRR21674632 | Sensitive | lineage4.3.3 | None | SRR21727559 | Sensitive | lineage4.3.3 | None | ERR11068177 | Sensitive | lineage3.1.2 | None | ERR11082129 | MDR-TB | lineage4.8 | None | ERR11081797 | MDR-TB | lineage4.8 | None | ERR11081799 | MDR-TB | lineage4.8 | None | ERR11081858 | MDR-TB | lineage4.8 | None | ERR11068606 | Sensitive | lineage4.8 | None | ERR11068693 | Sensitive | lineage4 | None | ERR11068901 | Sensitive | lineage4.8 | None | ERR11080956 | MDR-TB | lineage4.8 | None | ERR11082020 | Sensitive | lineage4.8 | None | SRR23691344 | Sensitive | lineage2.2.1 | None | ERR11082937 | MDR-TB | lineage4.8 | None | ERR11083150 | Other | lineage4.1.2 | None | SRR21031744 | Sensitive | lineage2.2.1 | None | SRR21887662 | Pre-XDR-TB | lineage2.2.1 | None | ERR1465735 | Sensitive | lineage4.1.2.1 | lk | ERR4815229 | Sensitive | lineage4.3.2 | None | ERR1465806 | Sensitive | lineage4.1.2.1 | lk | ERR4813927 | MDR-TB | lineage4.3.3 | None | ERR553229 | Sensitive | lineage4.3.3 | cg | ERR161022 | Sensitive | lineage4.3.4.2.1 | None | ERR176821 | Sensitive | lineage4.3.4.2.1 | mw | SRR6280200 | Sensitive | lineage2.2.1 | cn | ERR551820 | Sensitive | lineage4.3.3 | cg | ERR190346 | Sensitive | lineage4.3.2.1 | mw | SAMN02414844 | MDR-TB | lineage4.8 | se | ERR551502 | Sensitive | lineage4.3.3 | cg | ERR190348 | Sensitive | lineage4.3.4.2.1 | mw | ERR4814652 | Sensitive | lineage4.1.2.1 | gb | SAMN03246414 | Pre-XDR-TB | lineage2.2.1 | cn | SRR3675253 | HR-TB | lineage4.3.4.2.1;lineage4.1.1.3 | gb | ERR4813235 | Other | lineage4.8 | pe | ERR3275338 | Sensitive | lineage4.8 | nl | SRR6280295 | Sensitive | lineage2.2.1 | cn | ERR2145521 | Sensitive | lineage4.8 | None | SRR5065500 | Other | lineage2.2.2 | vn | SRR5065555 | HR-TB | lineage2.2.1 | vn | ERR4814911 | Other | lineage4.3.3 | None | ERR3275265 | Sensitive | lineage4.3.4.2.1 | nl | ERR4817045 | Sensitive | lineage4.1.2.1 | None | ERR4817360 | Sensitive | lineage4.1.2.1 | gb | ERR2145512 | MDR-TB | lineage4.1.2.1 | None | SAMN02414877 | MDR-TB | lineage4.8 | se | ERR4818655 | Other | lineage4.3.3 | None | ERR2513369 | Sensitive | lineage3 | gb | SRR5073651 | Other | lineage2.2.1 | vn | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4818016 | Sensitive | lineage4.3.2 | None | ERR2503430 | Sensitive | lineage4.8 | fi | ERR2512855 | Other | lineage4.8 | gb | ERR2510162 | HR-TB | lineage4.3.2 | pe | ERR2512858 | Sensitive | lineage4.1.2.1 | gb | ERR2503567 | Sensitive | lineage4.3.4.1 | fi | ERR2513466 | Sensitive | lineage3 | gb | ERR2517155 | Sensitive | lineage4.8 | nl | ERR2513325 | Sensitive | lineage3 | gb | SRR5074000 | Other | lineage2.2.1 | vn | ERR4817642 | Other | lineage4.3.3 | None | ERR2513638 | Sensitive | lineage4.6.2.2 | gb | ERR2516357 | MDR-TB | lineage4.8 | be | ERR2513734 | Other | lineage4.1.2.1 | gb | ERR2513914 | HR-TB | lineage4.4.1.1 | gb | SRR6280234 | Sensitive | lineage2.2.1 | cn | ERR3275692 | Sensitive | lineage4.3.3 | nl | SRR6280183 | Sensitive | lineage2.2.1 | cn | SRR6280238 | Sensitive | lineage2.2.1 | cn | ERR2517530 | Sensitive | lineage4.3.4.2.1 | nl | ERR2446349 | Sensitive | lineage4.3.4.2.1 | nl | ERR2199918 | Sensitive | lineage2.2.1 | de | ERR4819918 | Sensitive | lineage4.1.2.1 | gb | ERR2514888 | Sensitive | lineage3 | gb | ERR2653010 | Sensitive | lineage4.3.3 | None | ERR4821833 | Sensitive | lineage4.6.1.2 | None | ERR1193651 | Sensitive | lineage4.3.3 | cd | ERR270643 | Sensitive | lineage4.5 | None | ERR2653232 | MDR-TB | lineage4.3.3 | None | ERR2706923 | MDR-TB | lineage4.3.3;lineage4.1.2;lineage4.1.1 | cd | SRR23339941 | Sensitive | lineage4.8 | None | ERR2707030 | MDR-TB | lineage4.3.3 | cd | ERR2706972 | MDR-TB | lineage4.3.3 | cd | ERR2706983 | MDR-TB | lineage4.3.3 | cd | ERR2706981 | HR-TB | lineage4.3.3 | cd | SRR6045971 | Sensitive | lineage4.1.2.1 | gb | ERR2707146 | MDR-TB | lineage4.3.3 | cd | ERR2446391 | Sensitive | lineage4.3.3 | nl | ERR4822244 | Sensitive | lineage4.3.4.2.1 | None | SRR6044896 | Other | lineage4.8 | gb | ERR4822271 | Sensitive | lineage4.8 | gb | SRR6045993 | Other | lineage4.8 | gb | ERR4830815 | Pre-XDR-TB | lineage4.1.2.1 | et | ERR4828252 | Other | lineage2.2.1 | vn | ERR4828249 | Other | lineage2.2.1 | vn | ERR4828927 | RR-TB | lineage4.8 | None | ERR551404 | Sensitive | lineage4.3.3 | cg | ERR4830781 | Pre-XDR-TB | lineage4.1.2.1 | et | ERR294194 | Sensitive | lineage4.1.2.1 | None | SRR6152921 | Other | lineage4.8 | ca | SRR6046779 | Other | lineage4.1.2.1 | gb | ERR294213 | Sensitive | lineage4.3.4.2.1 | None | ERR294235 | Sensitive | lineage3 | None | SRR6896145 | Sensitive | lineage4.3.4.2.1 | None | ERR4831111 | Sensitive | lineage4.8 | de | SRR6896170 | Sensitive | lineage4.3.4.2.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR6896289 | HR-TB | lineage4.3.2.1 | None | SRR6785416 | HR-TB | lineage2.2.1 | None | SRR6964599 | Pre-XDR-TB | lineage3 | None | SRR6824481 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824668 | MDR-TB | lineage4.5;lineage2.2.1 | cn |
|---|
