lineage | Count |
---|---|
lineage3 | 12 |
lineage4.1.2.1 | 8 |
lineage3.1.2 | 2 |
lineage1.2.2.2 | 2 |
lineage1.1.2 | 7 |
lineage4.1.1.3.1 | 8 |
lineage1.1.3.1 | 1 |
lineage7 | 3 |
1 | |
lineage4.1.2 | 3 |
lineage3.1.1 | 18 |
lineage1.1.3.2 | 11 |
lineage4.4.1.1 | 1 |
lineage1.2.2.1 | 6 |
lineage4.3.4.2.1 | 37 |
lineage4.8 | 11 |
lineage4.9.1 | 5 |
lineage4.3.4.1 | 3 |
lineage4.6.1.2 | 1 |
lineage4.6.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.4.2.1;lineage1.1.3 | 1 |
lineage4.7 | 2 |
lineage4.3.4.1;lineage1.1.2 | 1 |
lineage4.3.3 | 1 |
lineage4.3.2.1 | 1 |
lineage4.3.4.1;lineage1.1.3.2 | 1 |
lineage4.8.2 | 6 |
lineage3.1.2.1 | 2 |
lineage4.1.1 | 6 |
lineage4.3.1.1 | 1 |
lineage3.1.2.2 | 2 |
lineage4.2.2 | 1 |
lineage4.9 | 2 |
lineage4.4.2 | 1 |
lineage2.2.1 | 1 |
lineage4.8.1 | 1 |
spoligotype | Count |
---|---|
None | 174 |
ID | Drug resistance | Lineage | Country iso2 | SRR2100077 | Sensitive | lineage3 | None | SRR2100095 | Sensitive | lineage4.1.2.1 | None | SRR2100076 | Sensitive | lineage3.1.2 | None | SRR6650175 | Sensitive | lineage1.2.2.2 | None | SRR2100098 | Sensitive | lineage1.1.2 | None | SRR2469365 | Sensitive | lineage4.1.1.3.1 | None | SRR6650299 | Other | lineage1.1.3.1 | None | SRR6650235 | Other | lineage3 | None | ERR1200603 | Sensitive | lineage7 | None | ERR181712 | Sensitive | None | ERR233346 | Sensitive | lineage7 | None | ERR841404 | Sensitive | lineage4.1.2 | ch | ERR245668 | Sensitive | lineage3.1.1 | mw | ERR245656 | Sensitive | lineage1.1.3.2 | mw | ERR464771 | Sensitive | lineage4.4.1.1 | ch | ERR245646 | Sensitive | lineage3.1.1 | mw | ERR245671 | Sensitive | lineage3.1.1 | mw | ERR245727 | Sensitive | lineage1.2.2.1 | mw | ERR245700 | Sensitive | lineage4.3.4.2.1 | mw | ERR245702 | Sensitive | lineage3.1.1 | mw | ERR245664 | Sensitive | lineage4.3.4.2.1 | mw | ERR245672 | Sensitive | lineage1.2.2.1 | mw | ERR245703 | Sensitive | lineage1.1.3.2 | mw | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245747 | MDR-TB | lineage3 | mw | ERR245749 | Sensitive | lineage4.3.4.2.1 | mw | ERR245751 | Sensitive | lineage1.2.2.1 | mw | ERR245806 | Sensitive | lineage4.8 | mw | ERR245752 | Other | lineage4.3.4.2.1 | mw | ERR245769 | Sensitive | lineage4.3.4.2.1 | None | ERR245758 | Other | lineage4.9.1 | None | ERR245767 | Sensitive | lineage4.3.4.2.1 | mw | ERR245812 | Sensitive | lineage4.3.4.2.1 | mw | ERR1200626 | Sensitive | lineage1.1.2 | et | ERR245827 | Sensitive | lineage3.1.1 | mw | ERR841406 | Other | lineage4.1.2 | ch | ERR233351 | Sensitive | lineage1.1.2 | et | ERR1200625 | Sensitive | lineage7 | et | ERR027464 | Sensitive | lineage4.3.4.1 | gb | ERR036194 | Other | lineage4.6.1.2 | None | ERR028330 | Sensitive | lineage4.6.1 | None | ERR036192 | Sensitive | lineage4.3.4.2.1 | mw | ERR036189 | Sensitive | lineage4.3.4.2.1 | mw | ERR036210 | Sensitive | lineage3.1.1 | mw | ERR036199 | Sensitive | lineage4.3.4.2.1 | mw | ERR036198 | Other | lineage4.3.4.2 | None | ERR036203 | HR-TB | lineage4.3.4.2.1 | mw | ERR036211 | Other | lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 | None | ERR036214 | Sensitive | lineage4.3.4.2.1 | mw | ERR036202 | Sensitive | lineage4.3.4.2.1 | mw | ERR036213 | Sensitive | lineage1.1.3.2 | mw | ERR036220 | Sensitive | lineage4.3.4.2.1 | mw | ERR036217 | Sensitive | lineage1.1.3.2 | mw | ERR036221 | Sensitive | lineage4.1.1.3 | mw | ERR036219 | Sensitive | lineage4.9.1 | mw | ERR036224 | HR-TB | lineage4.3.4.2.1;lineage1.1.3 | None | ERR036226 | HR-TB | lineage4.3.4.2.1 | mw | ERR036227 | Sensitive | lineage4.7 | mw | ERR036223 | Sensitive | lineage1.2.2.1 | mw | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR036248 | Sensitive | lineage4.8 | mw | ERR036240 | Sensitive | lineage4.3.4.2.1 | mw | ERR036245 | Sensitive | lineage4.3.4.2.1 | mw | ERR036234 | HR-TB | lineage4.3.3 | mw | ERR037471 | Sensitive | lineage4.3.4.2.1 | mw | ERR037476 | Sensitive | lineage1.1.3.2 | mw | ERR037478 | Sensitive | lineage4.3.4.2.1 | mw | ERR037470 | Sensitive | lineage4.3.4.2.1 | mw | ERR037491 | HR-TB | lineage1.1.2 | mw | ERR037479 | Sensitive | lineage4.3.4.2.1 | mw | ERR037486 | MDR-TB | lineage4.3.4.2.1 | mw | ERR037489 | Sensitive | lineage1.2.2.2 | mw | ERR037484 | Sensitive | lineage4.8 | mw | ERR037488 | Other | lineage3 | mw | ERR037497 | Sensitive | lineage4.3.4.2.1 | mw | ERR037482 | Other | lineage3 | mw | ERR037504 | Other | lineage4.9.1 | None | ERR037513 | Sensitive | lineage4.3.4.2.1 | None | ERR037498 | Sensitive | lineage4.3.4.1 | mw | ERR037496 | Sensitive | lineage1.2.2.1 | mw | ERR037510 | Other | lineage1.1.3.2 | mw | ERR037507 | Sensitive | lineage4.9.1 | mw | ERR037515 | Sensitive | lineage4.3.4.2.1 | mw | ERR037516 | Sensitive | lineage4.3.4.1 | mw | ERR037523 | Sensitive | lineage1.1.3.2 | mw | ERR037519 | Sensitive | lineage1.1.3.2 | mw | ERR037511 | Sensitive | lineage1.1.3.2 | mw | ERR037526 | Sensitive | lineage4.9.1 | mw | ERR037531 | Sensitive | lineage4.3.2.1 | mw | ERR037527 | Sensitive | lineage4.3.4.2.1 | mw | ERR037514 | Sensitive | lineage4.3.4.2.1 | mw | ERR037520 | Sensitive | lineage1.1.3.2 | mw | ERR037525 | Sensitive | lineage4.3.4.2.1 | mw | ERR037534 | Sensitive | lineage4.3.4.2.1 | mw | ERR037528 | Sensitive | lineage4.3.4.2.1 | mw | ERR037522 | HR-TB | lineage4.3.4.2.1 | mw | ERR037547 | Sensitive | lineage4.3.4.1;lineage1.1.3.2 | mw | ERR037533 | Sensitive | lineage4.7 | mw | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR037545 | Sensitive | lineage4.3.4.2.1 | mw | ERR037542 | Sensitive | lineage4.3.4.2.1 | mw | ERR037540 | Sensitive | lineage4.8 | mw | ERR038266 | Sensitive | lineage3.1.1 | gb | ERR038254 | Sensitive | lineage4.8.2 | gb | ERR038259 | Sensitive | lineage1.2.2.1 | gb | ERR037554 | Sensitive | lineage4.3.4.2.1 | mw | ERR038253 | Sensitive | lineage4.1.1.3.1 | gb | ERR037553 | Sensitive | lineage4.3.4.2.1 | mw | ERR037555 | Sensitive | lineage1.1.3.2 | mw | ERR038269 | Sensitive | lineage3.1.1 | gb | ERR038271 | Sensitive | lineage3.1.1 | gb | ERR038260 | Other | lineage3.1.2.1 | gb | ERR038284 | Sensitive | lineage4.8.2 | gb | ERR038272 | Sensitive | lineage3.1.1 | gb | ERR038288 | Sensitive | lineage3 | gb | ERR038278 | Sensitive | lineage4.1.1 | gb | ERR039334 | Sensitive | lineage3 | gb | ERR039327 | Sensitive | lineage4.1.1 | gb | ERR038279 | Sensitive | lineage4.1.1.3.1 | gb | ERR038300 | Sensitive | lineage3.1.1 | gb | ERR038752 | MDR-TB | lineage3.1.2.1 | ug | ERR039333 | Sensitive | lineage3 | gb | ERR039331 | Sensitive | lineage3 | gb | ERR039339 | Sensitive | lineage4.8 | gb | ERR039340 | Sensitive | lineage4.8 | gb | ERR039342 | Sensitive | lineage4.8 | gb | ERR039344 | Sensitive | lineage4.1.2.1 | gb | ERR039346 | Sensitive | lineage4.1.1.3.1 | gb | ERR039336 | Sensitive | lineage4.3.1.1 | gb | ERR040086 | Sensitive | lineage3.1.1 | gb | ERR046730 | HR-TB | lineage3.1.2.2 | gb | ERR039345 | Sensitive | lineage4.2.2 | gb | ERR040104 | Sensitive | lineage4.8.2 | gb | ERR040138 | MDR-TB | lineage4.9 | ug | ERR046737 | Sensitive | lineage4.1.1 | gb | ERR040091 | Sensitive | lineage3.1.1 | gb | ERR040105 | Sensitive | lineage4.8.2 | gb | ERR040118 | MDR-TB | lineage3 | ug | ERR046792 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046760 | Sensitive | lineage4.8.2 | gb | ERR046790 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046751 | Sensitive | lineage4.8.2 | gb | ERR046771 | Sensitive | lineage3.1.1 | gb | ERR046789 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046892 | Sensitive | lineage4.4.2 | gb | ERR046802 | Sensitive | lineage3.1.2 | None | ERR046806 | Sensitive | lineage3 | None | ERR046872 | Sensitive | lineage4.1.2.1 | gb | ERR046884 | Sensitive | lineage4.3.4.2.1 | gb | ERR046803 | Sensitive | lineage3 | None | ERR046832 | Sensitive | lineage1.1.2 | gb | ERR046874 | Sensitive | lineage4.1.2.1 | gb | ERR046936 | Sensitive | lineage3.1.1 | gb | ERR046910 | Sensitive | lineage4.1.1.3.1 | gb | ERR046944 | Pre-XDR-TB | lineage4.8 | None | ERR046914 | Sensitive | lineage3.1.1 | gb | ERR046924 | Sensitive | lineage4.1.1 | gb | ERR046938 | Sensitive | lineage2.2.1 | gb | ERR046941 | Sensitive | lineage3.1.2.2 | gb | ERR046942 | Sensitive | lineage3.1.1 | gb | ERR046957 | Sensitive | lineage4.1.2.1 | gb | ERR046950 | Sensitive | lineage4.1.1 | gb | ERR046951 | Sensitive | lineage4.8 | gb | ERR046956 | Sensitive | lineage4.9 | None | ERR046978 | Sensitive | lineage1.1.2 | None | ERR046971 | Sensitive | lineage4.1.1 | gb | ERR046970 | Sensitive | lineage3.1.1 | gb | ERR046973 | Sensitive | lineage4.1.2.1 | None | ERR046990 | Sensitive | lineage4.1.2.1 | gb | ERR046974 | Sensitive | lineage4.1.2.1 | gb | ERR047006 | Sensitive | lineage4.8.1 | gb | ERR047001 | HR-TB | lineage1.1.2 | gb | ERR046998 | Sensitive | lineage4.8 | gb | ERR1034682 | MDR-TB | lineage4.8 | co |
---|