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SRA data
Rv1129c
- c.-90G>C
Drug resistance types
2 Sensitive
0 RR-TB
2 HR-TB
6 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
4
lineage4.8
2
lineage3
2
lineage2.2.1.1
1
lineage5.1.3
1
lineage4.2.2.2
1
lineage4.4.1.1
1
lineage2.2.2
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
13
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023313
Sensitive
lineage4.2.2.2
None
ERR11043393
MDR-TB
lineage4.8
None
ERR13276129
MDR-TB
lineage2.2.1
None
ERR13285126
MDR-TB
lineage4.8
None
ERR13289399
XDR-TB
lineage2.2.2
None
ERR2510252
Pre-XDR-TB
lineage2.2.1.1
pk
ERR4276891
MDR-TB
lineage2.2.1
None
ERR4799102
Pre-XDR-TB
lineage3
in
SRR21733042
Sensitive
lineage3
None
SRR24061601
HR-TB
lineage5.1.3
None
Showing 1 to 10 of 13 entries
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