lineage | Count |
---|---|
lineage2.2.2 | 7 |
lineage4.2.2.2 | 1 |
lineage4.3.3 | 1 |
lineage4.1.2.1 | 5 |
lineage3 | 5 |
lineage3.1.1 | 3 |
lineage4.5 | 1 |
lineage4.6.1.2 | 6 |
lineage4.2.2 | 9 |
lineage4.1.1.3 | 1 |
lineage2.2.1 | 7 |
lineage1.2.1.2.1 | 1 |
lineage1.2.2.2 | 3 |
lineage4.2.2;lineage4.6.2.2 | 1 |
lineage4.4.2 | 2 |
lineage1.1.3 | 2 |
lineage5.1.1 | 2 |
lineage4.2.1 | 2 |
lineage4.8 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 61 |
ID | Drug resistance | Lineage | Country iso2 | ERR10610332 | Pre-XDR-TB | lineage2.2.2 | None | ERR987750 | MDR-TB | lineage4.2.2.2 | None | SRR8380912 | Sensitive | lineage4.3.3 | in | ERR7910851 | MDR-TB | lineage4.1.2.1 | None | SRR28351663 | Pre-XDR-TB | lineage3 | None | SRR1163239 | MDR-TB | lineage3.1.1 | None | SRR1163108 | MDR-TB | lineage3.1.1 | None | ERR4822509 | Sensitive | lineage4.5 | de | ERR2707009 | MDR-TB | lineage4.6.1.2 | cd | ERR4822354 | MDR-TB | lineage4.2.2 | None | ERR11488677 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1654658 | MDR-TB | lineage4.6.1.2 | None | ERR4822328 | RR-TB | lineage4.1.2.1 | None | SRR25207145 | Pre-XDR-TB | lineage2.2.1 | None | ERR7902685 | HR-TB | lineage1.2.1.2.1 | None | DRR130195 | MDR-TB | lineage4.2.2 | None | ERR13289384 | XDR-TB | lineage2.2.2 | None | ERR9993066 | XDR-TB | lineage2.2.2 | None | SRR7069423 | Sensitive | lineage3 | None | ERR4831912 | HR-TB | lineage2.2.1 | vn | ERR4799059 | Pre-XDR-TB | lineage4.1.2.1 | in | SRR22249980 | Other | lineage1.2.2.2 | None | ERR13288773 | MDR-TB | lineage2.2.2 | None | ERR13291004 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969452 | MDR-TB | lineage4.2.2 | None | ERR369620 | HR-TB | lineage4.2.2;lineage4.6.2.2 | None | ERR13439860 | HR-TB | lineage2.2.1 | None | ERR4817759 | Sensitive | lineage4.4.2 | gb | ERR7910852 | MDR-TB | lineage4.1.2.1 | None | SRR29017409 | MDR-TB | lineage1.1.3 | None | ERR3170440 | RR-TB | lineage5.1.1 | gh | ERR4808905 | XDR-TB | lineage2.2.2 | za | SRR22175194 | HR-TB | lineage1.2.2.2 | None | SRR6797868 | Sensitive | lineage1.2.2.2 | None | ERR3273212 | MDR-TB | lineage2.2.1 | None | ERR4810979 | Pre-XDR-TB | lineage4.2.2 | cn | ERR13288887 | XDR-TB | lineage2.2.2 | None | ERR2706968 | MDR-TB | lineage4.6.1.2 | cd | ERR1654663 | MDR-TB | lineage4.6.1.2 | None | ERR3170422 | Sensitive | lineage5.1.1 | gh | ERR13290694 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516389 | MDR-TB | lineage4.2.1 | be | SRR23861971 | HR-TB | lineage4.8 | None | ERR4799165 | Pre-XDR-TB | lineage3 | in | ERR11049845 | Sensitive | lineage4.1.2.1 | None | SRR786397 | MDR-TB | lineage3 | None | SRR28044355 | MDR-TB | lineage3 | None | SRR21736385 | Other | lineage4.1.2 | None | ERR9992722 | XDR-TB | lineage2.2.2 | None | SRR29231692 | MDR-TB | lineage4.6.1.2 | None | ERR4830602 | Pre-XDR-TB | lineage4.2.1 | tm | DRR130150 | MDR-TB | lineage4.2.2 | None | SRR5065400 | HR-TB | lineage2.2.1 | vn | SRR16370547 | MDR-TB | lineage4.2.2 | None | SRR8651626 | Pre-XDR-TB | lineage4.4.2 | cn | SAMN02414863 | MDR-TB | lineage3.1.1 | se | SRR20969777 | MDR-TB | lineage4.2.2 | None | ERR7911325 | MDR-TB | lineage4.2.2 | vn | ERR4553628 | RR-TB | lineage1.1.3 | None | ERR13254143 | MDR-TB | lineage4.2.2 | None | SRR29231707 | MDR-TB | lineage4.6.1.2 | None |
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