lineage | Count |
---|---|
lineage2.2.1 | 47 |
lineage4.1.2.1;lineage4.9 | 1 |
lineage1.1.3.3 | 2 |
lineage3 | 1 |
lineage2.2.1;lineage4.1.2.1 | 1 |
lineage4.4.2 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 | SRR18715376 | MDR-TB | lineage2.2.1 | None | SRR14782801 | Sensitive | lineage4.1.2.1;lineage4.9 | None | ERR5865230 | MDR-TB | lineage2.2.1 | None | ERR7912728 | MDR-TB | lineage2.2.1 | us | ERR11081990 | MDR-TB | lineage2.2.1 | None | ERR4817148 | Other | lineage1.1.3.3 | None | SRR10397130 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397136 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864660 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814907 | Other | lineage1.1.3.3 | gb | ERR551379 | MDR-TB | lineage2.2.1 | None | ERR5865690 | MDR-TB | lineage2.2.1 | None | ERR8774572 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045004 | Pre-XDR-TB | lineage3 | None | ERR5865689 | MDR-TB | lineage2.2.1 | None | ERR5865229 | MDR-TB | lineage2.2.1 | None | ERR5866324 | MDR-TB | lineage2.2.1 | None | ERR5864659 | MDR-TB | lineage2.2.1 | None | SRR5152930 | MDR-TB | lineage2.2.1 | None | ERR11082389 | MDR-TB | lineage2.2.1 | None | SRR16088240 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR5866308 | MDR-TB | lineage2.2.1 | None | ERR5866310 | MDR-TB | lineage2.2.1 | None | ERR4810896 | Sensitive | lineage4.4.2 | cn | ERR7911389 | MDR-TB | lineage2.2.1 | us | ERR551468_ERR551469 | MDR-TB | lineage2.2.1 | None | ERR551468 | MDR-TB | lineage2.2.1 | None | ERR551469 | MDR-TB | lineage2.2.1 | None | ERR5865280 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081045 | MDR-TB | lineage2.2.1 | None | ERR8774376 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865282 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539018 | HR-TB | lineage2.2.1 | None | ERR5864658 | MDR-TB | lineage2.2.1 | None | ERR5864657 | MDR-TB | lineage2.2.1 | None | ERR5865231 | MDR-TB | lineage2.2.1 | None | ERR5865284 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865281 | Pre-XDR-TB | lineage2.2.1 | None | SRR24673516 | MDR-TB | lineage2.2.1 | None | ERR551378_ERR551377_ERR551379 | MDR-TB | lineage2.2.1 | None | SAMEA2533898 | MDR-TB | lineage2.2.1 | uz | SRR18715164 | MDR-TB | lineage2.2.1 | None | ERR5865704 | MDR-TB | lineage2.2.1 | None | ERR5865703 | MDR-TB | lineage2.2.1 | None | SRR5153094 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864656 | MDR-TB | lineage2.2.1 | None | ERR5866323 | MDR-TB | lineage2.2.1 | None | ERR2179771 | Sensitive | lineage4.5 | cn | ERR11069133 | MDR-TB | lineage2.2.1 | None | ERR5866325 | MDR-TB | lineage2.2.1 | None | SAMEA2533964 | MDR-TB | lineage2.2.1 | uz | SRR28239629 | MDR-TB | lineage2.2.1 | None | ERR5865283 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041768 | MDR-TB | lineage2.2.1 | rs |
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