lineage | Count |
---|---|
lineage2.2.1 | 22 |
lineage4.1.1 | 2 |
lineage4.1.2.1 | 1 |
lineage2.2.1;lineage4.3.3 | 5 |
lineage4.1.2 | 2 |
lineage3.1.2.1 | 1 |
lineage4.5 | 4 |
lineage4.6.1.1 | 1 |
lineage3 | 3 |
lineage3.1.2 | 1 |
lineage1.2.2.2 | 1 |
lineage2.2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.2.2.2 | 1 |
lineage1.1.3.1 | 2 |
lineage4 | 2 |
spoligotype | Count |
---|---|
None | 50 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR413228 | MDR-TB | lineage2.2.1 | None |
SRR6480408 | MDR-TB | lineage2.2.1 | None |
ERR13267433 | HR-TB | lineage4.1.1 | None |
ERR6866527 | HR-TB | lineage4.1.2.1 | None |
SRR1163172 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None |
ERR4024978 | Sensitive | lineage4.1.2 | None |
SRR10808976 | MDR-TB | lineage2.2.1 | None |
SRR25515477 | Sensitive | lineage2.2.1 | None |
SRR1172073 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None |
SRR13243561 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4818505 | Sensitive | lineage3.1.2.1 | gb |
SRR1163374 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None |
SRR413231 | MDR-TB | lineage2.2.1 | None |
SRR21277502 | Other | lineage2.2.1 | None |
SRR21746996 | MDR-TB | lineage4.5 | None |
SRR25207149 | Pre-XDR-TB | lineage4.5 | None |
ERR4810626 | Sensitive | lineage4.5 | cn |
SRR28240198 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21576708 | MDR-TB | lineage2.2.1 | None |
ERR11775865 | HR-TB | lineage4.6.1.1 | None |
SRR8237347 | Sensitive | lineage2.2.1 | None |
ERR13260931 | MDR-TB | lineage3 | None |
SRR21732876 | HR-TB | lineage3 | None |
ERR234115 | MDR-TB | lineage2.2.1 | cn |
SRR1169046 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None |
SRR29231432 | Sensitive | lineage3 | None |
SAMN02419670 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | by |
SRR2024917 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR30180277 | MDR-TB | lineage4.5 | None |
SRR20969362 | MDR-TB | lineage2.2.1 | None |
ERR4811716 | HR-TB | lineage4.1.1 | pe |
ERR4796863 | Pre-XDR-TB | lineage3.1.2 | in |
ERR9657196 | Sensitive | lineage1.2.2.2 | None |
SRR30180352 | Pre-XDR-TB | lineage2.2.2 | None |
SRR413266 | MDR-TB | lineage2.2.1 | None |
SRR15368767 | RR-TB | lineage2.2.1 | None |
SRR13232736 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865890 | MDR-TB | lineage2.2.1 | None |
SRR25534478 | Sensitive | lineage2.2.1.1 | None |
ERR6397179 | Sensitive | lineage4.2.2.2 | None |
SRR6152844 | Sensitive | lineage2.2.1 | ca |
SRR2024941 | Pre-XDR-TB | lineage2.2.1 | cn |
ERR4553503 | MDR-TB | lineage1.1.3.1 | None |
SRR413229 | MDR-TB | lineage2.2.1 | None |
SRR25207078 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4178225 | Sensitive | lineage4 | None |
SRR29017576 | MDR-TB | lineage1.1.3.1 | None |
ERR6865531 | Sensitive | lineage4.1.2 | None |
ERR6865778 | Sensitive | lineage4 | None |
ERR4811281 | Pre-XDR-TB | lineage2.2.1 | cn |