lineage | Count |
---|---|
lineage4.2.1 | 12 |
lineage2.2.2 | 9 |
lineage4.2.2.2 | 2 |
lineage4.1.2.1 | 2 |
lineage4.4 | 1 |
lineage5.1.1 | 1 |
lineage4.2.1.1 | 2 |
lineage1.1.1.1 | 2 |
lineage4.3.4.2 | 8 |
lineage4.3.3 | 2 |
lineage1.1.3.1 | 2 |
lineage3 | 1 |
lineage4.1.1.3 | 2 |
lineage4.2.2 | 4 |
lineage4.4.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.6.5 | 2 |
lineage4.6.1.1 | 1 |
lineage7 | 3 |
lineage4.3.4.2.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.3.4.1 | 1 |
lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | ERR3639723 | MDR-TB | lineage4.2.1 | None | SRR23340137 | MDR-TB | lineage4.2.1 | None | SRR23310965 | Pre-XDR-TB | lineage4.2.1 | None | SRR29093928 | XDR-TB | lineage2.2.2 | None | SRR5817466 | MDR-TB | lineage4.2.2.2 | au | ERR4872275 | XDR-TB | lineage4.2.1 | None | ERR2200080 | Sensitive | lineage4.1.2.1 | sz | SRR15315964 | Pre-XDR-TB | lineage4.4 | None | ERR234149 | Sensitive | lineage5.1.1 | gh | ERR5917689 | Sensitive | lineage4.2.1.1 | by | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR11068872 | Sensitive | lineage1.1.1.1 | None | SRR29690803 | RR-TB | lineage4.3.4.2 | None | ERR4195728 | Sensitive | lineage4.3.3 | None | SRR28860202 | Sensitive | lineage4.3.4.2 | None | SRR10379953 | XDR-TB | lineage4.2.1 | None | SRR28859866 | Sensitive | lineage1.1.3.1 | None | SRR21657216 | Sensitive | lineage1.1.3.1 | None | ERR11043317 | MDR-TB | lineage4.2.1 | None | ERR4831487 | Pre-XDR-TB | lineage3 | None | ERR4800491 | Sensitive | lineage4.1.1.3 | in | ERR11081313 | Sensitive | lineage4.3.4.2 | None | ERR9285868 | Sensitive | lineage4.2.2.2 | None | SRR26112461 | Sensitive | lineage4.3.4.2 | None | DRR130150 | MDR-TB | lineage4.2.2 | None | SRR8651585 | MDR-TB | lineage4.4.2 | cn | ERR4810517 | Sensitive | lineage2.2.2 | cn | ERR867549 | MDR-TB | lineage4.2.1 | None | SRR21732096 | Sensitive | lineage2.2.1.1 | None | ERR11081762 | MDR-TB | lineage4.2.1 | None | SRR10869250 | Pre-XDR-TB | lineage2.2.2 | None | ERR11081761 | MDR-TB | lineage4.2.1 | None | SRR21690303 | HR-TB | lineage4.6.5 | None | DRR130195 | MDR-TB | lineage4.2.2 | None | SRR12634567 | Sensitive | lineage4.6.1.1 | None | SRR29881210 | Sensitive | lineage4.3.4.2 | None | ERR5758361 | Pre-XDR-TB | lineage2.2.2 | None | ERR13254143 | MDR-TB | lineage4.2.2 | None | ERR11068585 | Sensitive | lineage7 | None | SRR23310943 | Pre-XDR-TB | lineage4.2.1 | None | ERR13285370 | HR-TB | lineage4.6.5 | None | DRR034497 | Sensitive | lineage2.2.2 | None | SRR14801592 | Pre-XDR-TB | lineage4.2.1 | None | SRR28357668 | Other | lineage4.3.4.2 | None | ERR11775823 | Sensitive | lineage4.3.4.2.1 | None | ERR11068873 | Sensitive | lineage1.1.1.1 | None | ERR7911651 | Pre-XDR-TB | lineage2.2.2 | za | SRR6797565 | Other | lineage1.2.2.2 | None | ERR4822354 | MDR-TB | lineage4.2.2 | None | ERR7737753 | MDR-TB | lineage7 | None | ERR4800254 | Sensitive | lineage4.1.1.3 | in | SRR23861992 | Sensitive | lineage4.2.1.1 | None | ERR9121260 | Sensitive | lineage4.3.3 | None | ERR8025631 | Pre-XDR-TB | lineage2.2.2 | None | SRR16915705 | HR-TB | lineage4.3.4.1 | None | SRR29093690 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873440 | Pre-XDR-TB | lineage2.2.2 | za | ERR13260396 | HR-TB | lineage4.9 | None | ERR1200624 | Sensitive | lineage7 | et | SRR28683944 | RR-TB | lineage4.3.4.2 | None | ERR12790845 | MDR-TB | lineage4.3.4.2 | None | ERR11082045 | Sensitive | lineage4.1.2.1 | None |
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