Rv1258c - c.-16T>C
Drug resistance types
35 Sensitive
1 RR-TB
10 HR-TB
24 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 3 |
| lineage4.3.4.2 | 5 |
| lineage2.2.1 | 28 |
| lineage4.8 | 9 |
| lineage4.3.3 | 3 |
| lineage1.2.2.1 | 2 |
| lineage1.2.1.2 | 4 |
| lineage4.5 | 4 |
| lineage2.2.2 | 2 |
| lineage3.1.2.1 | 4 |
| lineage1.2.1.2.1 | 3 |
| lineage3.1.2 | 3 |
| lineage4.2.2 | 2 |
| lineage3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21690722 | HR-TB | lineage4.2.2.2 | None | SRR11348141 | MDR-TB | lineage4.3.4.2 | None | SRR27450410 | Sensitive | lineage2.2.1 | None | SRR20969552 | Sensitive | lineage2.2.1 | None | ERR552618 | Sensitive | lineage4.8 | None | ERR3275812 | HR-TB | lineage4.2.2.2 | nl | SRR1166934 | MDR-TB | lineage4.3.3 | None | SRR30182319 | Sensitive | lineage2.2.1 | None | SRR15014781 | MDR-TB | lineage4.3.4.2 | None | SRR15014681 | MDR-TB | lineage4.3.4.2 | None | SRR29772668 | MDR-TB | lineage1.2.2.1 | None | SRR29051501 | Sensitive | lineage2.2.1 | None | SRR29051412 | Sensitive | lineage2.2.1 | None | SRR21691172 | HR-TB | lineage1.2.1.2 | None | ERR4828484 | Sensitive | lineage2.2.1 | vn | SRR30180377 | MDR-TB | lineage4.5 | None | SRR29055963 | Sensitive | lineage2.2.1 | None | SRR29093896 | MDR-TB | lineage2.2.2 | None | ERR3275940 | HR-TB | lineage1.2.1.2 | nl | ERR552617 | Sensitive | lineage4.8 | cg | ERR13290941 | MDR-TB | lineage4.5 | None | ERR13276267 | MDR-TB | lineage3.1.2.1 | None | ERR11067335 | Sensitive | lineage4.8 | None | ERR987710 | MDR-TB | lineage4.8 | None | ERR13292327 | Sensitive | lineage2.2.1 | None | ERR13259994 | MDR-TB | lineage1.2.1.2.1 | None | SRR14088378 | Pre-XDR-TB | lineage3.1.2 | None | ERR2516884 | MDR-TB | lineage4.2.2 | gb | SRR29356756 | HR-TB | lineage4.2.2.2 | None | ERR2516924 | MDR-TB | lineage4.2.2 | gb | SRR18548998 | Sensitive | lineage2.2.1 | None | ERR4820477 | HR-TB | lineage3 | gb | ERR2517002 | MDR-TB | lineage3.1.2.1 | gb | SRR12006569 | Other | lineage1.2.1.2.1 | None | SRR21576640 | MDR-TB | lineage4.5 | None | SRR15723293 | Sensitive | lineage2.2.1 | None | ERR4828500 | Sensitive | lineage2.2.1 | vn | SRR5067697 | HR-TB | lineage2.2.1 | vn | SRR21659026 | Sensitive | lineage2.2.1 | None | SRR28868426 | Sensitive | lineage2.2.1 | None | SRR29016765 | Sensitive | lineage2.2.1 | None | SRR6650170 | Sensitive | lineage1.2.2.2 | None | SRR3724796 | Sensitive | lineage4.8 | None | ERR2510632 | HR-TB | lineage3.1.2 | pk | ERR4828592 | Sensitive | lineage2.2.1 | vn | ERR2510304 | Pre-XDR-TB | lineage3.1.2 | pk | SRR24799219 | Sensitive | lineage2.2.1 | None | SRR29772468 | MDR-TB | lineage1.2.2.1 | None | SRR13591415 | RR-TB | lineage4.8 | None | ERR4828470 | Sensitive | lineage2.2.1 | vn | ERR978666 | Sensitive | lineage4.8 | gl | ERR2677444 | MDR-TB | lineage3.1.2.1 | de | SRR21576576 | MDR-TB | lineage4.5 | None | SRR1162823 | MDR-TB | lineage4.3.3 | None | SRR29051428 | Sensitive | lineage2.2.1 | None | SRR28409320 | Sensitive | lineage1.2.1.2.1 | None | SRR29055418 | Other | lineage1.2.1.2 | None | ERR2843492 | Sensitive | lineage2.2.1 | None | SRR11348143 | MDR-TB | lineage4.3.4.2 | None | SRR13180246 | HR-TB | lineage4.8 | None | SRR21663291 | Sensitive | lineage2.2.1 | None | SRR5065671 | Sensitive | lineage2.2.1 | vn | SRR18911582 | Sensitive | lineage2.2.1 | None | SRR29050809 | Sensitive | lineage2.2.1 | None | ERR13291502 | Sensitive | lineage2.2.1 | None | ERR11068937 | MDR-TB | lineage3.1.2.1 | None | SRR29055743 | Sensitive | lineage2.2.1 | None | SAMN02414952 | MDR-TB | lineage4.3.3 | se | SRR13180395 | Sensitive | lineage4.8 | None | SRR11348147 | MDR-TB | lineage4.3.4.2 | None | ERR13195574 | MDR-TB | lineage2.2.2 | None | ERR4828545 | Sensitive | lineage2.2.1 | vn | ERR4800384 | HR-TB | lineage1.1.2 | None | SRR21685379 | Sensitive | lineage2.2.1 | None | SRR16370346 | Other | lineage1.2.1.2 | None |
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