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SRA data
Rv1258c
- c.-16T>C
Drug resistance types
35 Sensitive
1 RR-TB
10 HR-TB
24 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
28
lineage4.8
9
lineage4.3.4.2
5
lineage4.5
4
lineage3.1.2.1
4
lineage1.2.1.2
4
lineage1.2.1.2.1
3
lineage4.3.3
3
lineage4.2.2.2
3
lineage3.1.2
3
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
75
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11067335
Sensitive
lineage4.8
None
ERR11068937
MDR-TB
lineage3.1.2.1
None
ERR13195574
MDR-TB
lineage2.2.2
None
ERR13259994
MDR-TB
lineage1.2.1.2.1
None
ERR13276267
MDR-TB
lineage3.1.2.1
None
ERR13290941
MDR-TB
lineage4.5
None
ERR13291502
Sensitive
lineage2.2.1
None
ERR13292327
Sensitive
lineage2.2.1
None
ERR2510304
Pre-XDR-TB
lineage3.1.2
pk
ERR2510632
HR-TB
lineage3.1.2
pk
Showing 1 to 10 of 75 entries
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