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SRA data
Rv1258c
- c.1104T>C
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
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lineage
Count
lineage
Count
La1.7
14
lineage2.2.1
3
La1.6;La3;M.canetti;lineage4.2.2
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
lineage3
1
Showing 1 to 6 of 6 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
21
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11068354
Other
La1.7
None
ERR11068361
Other
La1.7
None
ERR11081465
Other
La1.7
None
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR2815597
Other
La1.7
None
ERR3335749
MDR-TB
lineage2.2.1
pk
ERR3335751
MDR-TB
lineage2.2.1
pk
ERR4798406
MDR-TB
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
None
SRR11662696
MDR-TB
La1.6;La3;M.canetti;lineage4.2.2
None
SRR17156531
Other
La1.7
None
Showing 1 to 10 of 21 entries
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