Rv1258c - c.580_581insC
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
19798 Sensitive
1438 RR-TB
3945 HR-TB
17945 MDR-TB
11017 Pre-XDR-TB
800 XDR-TB
3661 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 52123 |
| lineage2.2.1.1 | 4743 |
| lineage2.2.1.1;lineage4.4.1.1.1 | 4 |
| lineage2.2.1;lineage3 | 86 |
| lineage2.2.1;lineage4.2.1 | 77 |
| lineage2.2.1;lineage4.3.3 | 106 |
| lineage2.2.1;lineage3.1 | 2 |
| lineage2.2.1;lineage4.9 | 33 |
| lineage2.2.1;lineage4.1.2.1 | 74 |
| lineage2.2.1;lineage4.8 | 64 |
| lineage2.2.1.2 | 526 |
| lineage2.2.1;lineage4.3.4.2 | 9 |
| lineage2.2.1;lineage4.3.2.1 | 27 |
| lineage2.2.1;lineage2.2.2 | 24 |
| lineage2.2.1.1;lineage4.4.2 | 3 |
| lineage2.2.1;lineage4.1.1.1 | 4 |
| lineage1.1.2;lineage2.2.1 | 17 |
| lineage2.2.1;lineage4.2.2 | 11 |
| lineage2.2.1;lineage4 | 151 |
| lineage2.1;lineage2.2.1 | 4 |
| lineage2.2.1;lineage4.5 | 33 |
| lineage2.1;lineage2.2.1.1 | 2 |
| lineage1.1.1.1;lineage2.2.1 | 25 |
| lineage1.2.1.2.1;lineage2.2.1 | 6 |
| lineage2.2.1.1;lineage4.1.2 | 2 |
| lineage1.1.1;lineage2.2.1 | 7 |
| lineage2.2.1;lineage4.7 | 9 |
| lineage2.2.1;lineage4.2.1.1 | 14 |
| lineage1.1.1.1 | 1 |
| lineage2.2.1.1;lineage4.9 | 7 |
| lineage2.2.1.1;lineage4.3.2.1 | 13 |
| lineage2.2.1;lineage4.1.1.3 | 14 |
| lineage2.2.1.1;lineage4.6.1 | 4 |
| lineage2.2.1.1;lineage4.1.2.1 | 3 |
| lineage2.2.1;lineage4.3.4.1 | 7 |
| lineage2.2.1.1;lineage4.6.2.1 | 1 |
| lineage2.2.1;lineage4.8.1 | 1 |
| lineage1.2.2.2;lineage2.2.1 | 21 |
| lineage2.2.1;lineage3.1.3 | 1 |
| lineage2.2.1.1;lineage4.1.1.1 | 1 |
| lineage1.1.2;lineage1.1.3.1;lineage2.2.1 | 1 |
| lineage2.2.1.1;lineage3 | 16 |
| lineage2.2.1.1;lineage4.2.2 | 1 |
| lineage2.2.1;lineage4.1.1 | 5 |
| lineage2.2.1;lineage4.1.1;lineage4.8 | 2 |
| lineage1.1.3.3;lineage2.2.1;lineage3 | 1 |
| lineage2.2;lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.4.2;lineage4.5 | 1 |
| lineage2.2.1.1;lineage4 | 12 |
| lineage1.2.1.2;lineage2.2.1 | 1 |
| lineage2.2.1;lineage4.4.2 | 17 |
| lineage2.2.1;lineage4.3.4.2.1 | 6 |
| lineage2.2.1.1;lineage4.4.1.1 | 3 |
| La1.3;lineage2.2.1 | 3 |
| lineage2.2.1;lineage4.2.2.1 | 1 |
| lineage2.2 | 6 |
| lineage1.1.3.1;lineage2.2.1 | 5 |
| lineage2.2.1.2;lineage3 | 5 |
| lineage1.1.3.3;lineage2.2.1 | 3 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2;lineage4 | 1 |
| lineage2.2.1;lineage4.1.2;lineage4.3.3 | 1 |
| lineage2.2.1.1;lineage4.3.4.2.1 | 2 |
| lineage2.2.1.1;lineage2.2.2 | 6 |
| lineage2.2.1;lineage3.1.2 | 11 |
| lineage2.2.1;lineage4.4.1.1.1 | 2 |
| lineage2.2;lineage3.1.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 3 |
| lineage2.2.1.1;lineage4.3.3 | 6 |
| lineage2.2.1;lineage4.3.3;lineage4.8 | 4 |
| lineage2.2.1;lineage4.3.2 | 13 |
| lineage2.2.1.2;lineage4.1.1.3 | 2 |
| lineage2.2.1;lineage4.1.2;lineage4.8 | 2 |
| lineage1.1.1;lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1.1;lineage4.1.1.3 | 3 |
| lineage2.2.1;lineage4.4.1.1 | 17 |
| lineage1;lineage2.2.1;lineage3;lineage4 | 1 |
| lineage2.2.1.1;lineage3;lineage4 | 2 |
| lineage2.2.1;lineage4.1 | 6 |
| lineage2.2.1;lineage4.2.2.2 | 11 |
| lineage2.2.1;lineage4.2 | 4 |
| La3;lineage2.2.1 | 7 |
| lineage2.2.1;lineage4.1.2 | 9 |
| lineage2.2.1.1;lineage3.1.2;lineage4.4 | 1 |
| La1.4;lineage2.2.1 | 1 |
| lineage2.2.1.1;lineage4.1.1.3;lineage4.4.1.1.1 | 1 |
| lineage2.2.1;lineage4.3 | 4 |
| lineage2.2.1.1;lineage3;lineage4.1.1.1 | 1 |
| lineage2.2.2 | 2 |
| lineage1.1.2;lineage2.2.1.2 | 1 |
| lineage2.2.1;lineage4.2.1;lineage4.3.3 | 1 |
| lineage2.2;lineage4.2.1 | 1 |
| lineage1.1.1;lineage2.2 | 1 |
| lineage2.2.1;lineage3.1.1;lineage4.2.2 | 1 |
| lineage1.1.1.1;lineage2.2.1;lineage4.4.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1.1;lineage4.5 | 3 |
| lineage2.2;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.2.1;lineage4.8 | 1 |
| lineage1.1.1;lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.1.1;lineage2.2.1.1 | 9 |
| lineage1;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage2.2.1.1;lineage4.3.4.1 | 1 |
| lineage2.2.1;lineage3.1.1;lineage4 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage4.4.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1;lineage3.1.2 | 3 |
| lineage1.1.1;lineage2.2.1;lineage4 | 2 |
| lineage1.1;lineage2.2.1 | 3 |
| lineage2.2.1;lineage4.1.4 | 1 |
| lineage2.2.1.1;lineage2.2.1.2;lineage3 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 2 |
| lineage2.2.1;lineage4.1.1.2 | 3 |
| lineage2.2.1;lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4.9 | 1 |
| lineage2.2.1;lineage4.3;lineage4.8 | 1 |
| lineage2.2.1.2;lineage3.1.2 | 1 |
| lineage1.1.3;lineage2.2.1 | 1 |
| lineage1.1.1.1;lineage2.2 | 2 |
| lineage2.2.1;lineage3.1.2.1 | 4 |
| lineage2.2.1.1;lineage4.2.1 | 1 |
| lineage2.2.1;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | 1 |
| La1.2;lineage2.2.1 | 1 |
| lineage1.1.1;lineage2.2.1.2 | 2 |
| lineage2.2;lineage4.3.3 | 1 |
| lineage2.2.1;lineage6.1.3 | 2 |
| lineage2.2.1;lineage3;lineage4.9 | 1 |
| lineage2.2.1.1;lineage6.1.3 | 1 |
| lineage2.2;lineage3 | 1 |
| lineage2.2.1;lineage4.3.1 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage3;lineage4.2.2.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.2;lineage4.3.4.2.1 | 1 |
| lineage4.5 | 1 |
| lineage1;lineage2.2.1 | 1 |
| lineage2.2.1;lineage3;lineage4.1.2;lineage4.2.2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4 | 2 |
| lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.1.1;lineage4.1.1 | 1 |
| lineage2.2.1;lineage3;lineage4 | 6 |
| lineage1.1.1 | 1 |
| lineage1;lineage2.2.1;lineage4.9 | 2 |
| lineage1.1.3.1;lineage2.2.1.2 | 1 |
| lineage2.2.1;lineage4.9.1 | 1 |
| lineage2.2.1;lineage3;lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.6.1.2 | 1 |
| lineage2.2.1;lineage4.4.1.2 | 1 |
| lineage1.1.3.2;lineage2.2.1 | 1 |
| lineage2.2.1;lineage4.1.2.1;lineage4.7 | 1 |
| lineage1.1.2;lineage2.2.1.1 | 2 |
| lineage2.2;lineage4.2.2;lineage4.4 | 1 |
| lineage4.9 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3 | 2 |
| lineage2.2.1.1;lineage4.8 | 4 |
| lineage2.2.1.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1;lineage4.6.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.6 | 1 |
| lineage2.2.1;lineage5 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4 | 1 |
| lineage2.2.1;lineage4.1.2.1;lineage4.3.2 | 1 |
| lineage2.2.1;lineage2.2.2;lineage4 | 1 |
| lineage2.1;lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.1;lineage4.3.3 | 1 |
| lineage2.2.1.2;lineage4.9 | 1 |
| lineage2.2.1;lineage3;lineage4.8 | 1 |
| La1.7;lineage2.2.1.1 | 1 |
| lineage2.2.1;lineage3;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.1.1.3;lineage4.3.2.1 | 1 |
| lineage2.2.1;lineage3.1.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1 | 1 |
| lineage1.2.2.2;lineage2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage1.2.2.2;lineage4.3.3 | 1 |
| lineage1.1.1.1;lineage2.2.1;lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58604 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 58604 rows and could cause your browser to crash if rendered.
