lineage | Count |
---|---|
lineage7 | 2 |
lineage4.4.1.1 | 5 |
lineage4.3.3 | 3 |
lineage3 | 6 |
lineage1.1.2 | 3 |
lineage4.1.2.1 | 6 |
La1.3 | 1 |
lineage4.1.2 | 2 |
lineage4.6.1.1 | 3 |
lineage4.6.3 | 3 |
lineage5.1.1 | 1 |
lineage2.2.1 | 2 |
lineage4.6 | 1 |
lineage4.6.1.2 | 1 |
lineage4.1;lineage1.1.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.8.2 | 3 |
lineage4.1.1 | 6 |
lineage4.1.1.3.1 | 4 |
La1.8.1 | 3 |
lineage3.1.1 | 6 |
lineage4.8.1 | 1 |
lineage3.1.2 | 2 |
lineage4.8 | 7 |
lineage4.9 | 1 |
lineage1.2.2.1 | 4 |
lineage4.6.2.1 | 1 |
lineage4.2.2 | 1 |
lineage4.6.2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage6.1.1 | 1 |
lineage4.2.2.2 | 1 |
1 |
spoligotype | Count |
---|---|
None | 86 |
ID | Drug resistance | Lineage | Country iso2 | ERR1200625 | Sensitive | lineage7 | et | ERR464772 | Sensitive | lineage4.4.1.1 | ch | ERR2516510 | MDR-TB | lineage4.3.3 | nl | ERR233360 | Sensitive | lineage3 | None | ERR233351 | Sensitive | lineage1.1.2 | et | ERR464768 | Sensitive | lineage4.4.1.1 | ch | ERR233352 | Sensitive | lineage4.1.2.1 | None | ERR1200616 | Sensitive | lineage4.1.2.1 | et | ERR1200622 | Other | La1.3 | et | ERR841406 | Other | lineage4.1.2 | ch | ERR1200604 | Sensitive | lineage7 | et | ERR1200627 | Sensitive | lineage4.3.3 | et | ERR1199054 | Sensitive | lineage4.6.1.1 | None | ERR464769 | Sensitive | lineage4.4.1.1 | ch | ERR1200626 | Sensitive | lineage1.1.2 | et | ERR1200611 | Other | lineage4.6.3 | et | ERR2181457 | MDR-TB | lineage5.1.1 | gh | ERR4831744 | MDR-TB | lineage2.2.1 | None | ERR025841 | RR-TB | lineage4.1.2.1 | None | ERR1199046 | Sensitive | lineage4.6.1.1 | ug | ERR1200621 | Sensitive | lineage4.6 | et | ERR036194 | Other | lineage4.6.1.2 | None | ERR028356 | Sensitive | lineage4.1;lineage1.1.1.1 | None | ERR046732 | Sensitive | lineage4.3.4.2.1 | gb | ERR036198 | Other | lineage4.3.4.2 | None | ERR046751 | Sensitive | lineage4.8.2 | gb | ERR046742 | Sensitive | lineage4.1.1 | None | ERR046785 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046774 | Other | La1.8.1 | None | ERR046754 | Sensitive | lineage4.8.2 | gb | ERR046773 | Sensitive | lineage3.1.1 | gb | ERR046778 | HR-TB | lineage4.8.1 | gb | ERR046829 | Sensitive | lineage3 | None | ERR046802 | Sensitive | lineage3.1.2 | None | ERR046821 | MDR-TB | lineage4.8 | gb | ERR046812 | Sensitive | lineage3 | None | ERR046817 | Sensitive | lineage4.9 | None | ERR046833 | Sensitive | lineage4.8 | gb | ERR046844 | Other | lineage1.2.2.1 | gb | ERR046838 | Sensitive | lineage4.6.2.1 | gb | ERR046854 | Sensitive | lineage3.1.1 | gb | ERR046848 | Sensitive | lineage1.2.2.1 | gb | ERR046847 | Sensitive | lineage3.1.1 | gb | ERR046855 | MDR-TB | lineage1.1.2 | gb | ERR046857 | Sensitive | lineage3.1.1 | gb | ERR046874 | Sensitive | lineage4.1.2.1 | gb | ERR046862 | Sensitive | lineage3 | gb | SRR2100071 | Sensitive | lineage4.1.1 | None | ERR046889 | Sensitive | lineage3.1.1 | gb | ERR046888 | Sensitive | lineage4.8 | gb | ERR046910 | Sensitive | lineage4.1.1.3.1 | gb | ERR046922 | Other | lineage4.2.2 | gb | ERR046946 | Sensitive | lineage4.1.1 | gb | ERR046954 | Other | La1.8.1 | gb | ERR046975 | Sensitive | lineage4.1.1 | gb | ERR046991 | Sensitive | lineage4.1.1 | gb | ERR046999 | Sensitive | lineage4.8 | gb | ERR046877 | Sensitive | lineage4.8.2 | gb | ERR046912 | Sensitive | lineage4.1.1 | gb | ERR046936 | Sensitive | lineage3.1.1 | gb | ERR046957 | Sensitive | lineage4.1.2.1 | gb | ERR046974 | Sensitive | lineage4.1.2.1 | gb | ERR046985 | MDR-TB | lineage4.1.1.3.1 | None | ERR047004 | Sensitive | lineage4.6.2.2 | gb | ERR047011 | Sensitive | lineage4.8 | gb | SRR2100074 | Other | La1.8.1 | None | SRR2100101 | MDR-TB | lineage4.1.1.3.1 | None | SRR2100076 | Sensitive | lineage3.1.2 | None | SRR2100082 | Sensitive | lineage3 | None | SRR2100091 | Sensitive | lineage3 | None | SRR2469374 | Sensitive | lineage4.8 | None | ERR233348 | Sensitive | lineage4.6.3 | et | ERR233361 | Sensitive | lineage2.2.1.1 | None | ERR464774 | Sensitive | lineage4.4.1.1 | ch | ERR1193641 | Sensitive | lineage4.3.3 | et | ERR1199053 | Sensitive | lineage4.6.1.1 | None | ERR233362 | Sensitive | lineage6.1.1 | sn | ERR1200637 | Sensitive | lineage4.2.2.2 | et | SAMN03246243 | MDR-TB | lineage2.2.1 | cn | ERR841400 | Other | lineage4.8 | None | ERR841404 | Sensitive | lineage4.1.2 | ch | SRR3732681 | HR-TB | None | ERR464771 | Sensitive | lineage4.4.1.1 | ch | ERR233353 | Sensitive | lineage1.2.2.1 | et | ERR1200629 | Sensitive | lineage1.2.2.1 | et | ERR1200614 | Sensitive | lineage4.6.3 | et |
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