Rv1267c - c.-446C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
11837 Sensitive
234 RR-TB
1933 HR-TB
1737 MDR-TB
282 Pre-XDR-TB
73 XDR-TB
1595 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 4581 |
| lineage1.1.1.1 | 1661 |
| lineage1.2.2.2 | 2735 |
| lineage1.1.3.2 | 512 |
| lineage1.1.3.1 | 1115 |
| lineage1.2.1.2.1 | 3632 |
| lineage1.1.1 | 1109 |
| lineage1.2.1.2 | 626 |
| lineage1.1.2;lineage4 | 14 |
| lineage2.2 | 1 |
| lineage1.1.3 | 232 |
| lineage1.2.2.1 | 450 |
| lineage1.1.3.3 | 246 |
| lineage1.2.1.1 | 204 |
| lineage1.1 | 31 |
| lineage4.1.2.1 | 2 |
| lineage1.2.1 | 64 |
| lineage1;lineage2.2.1;lineage3;lineage4 | 1 |
| lineage1.2.2 | 25 |
| lineage1.2.1.2.1;lineage2.2.1 | 10 |
| lineage1.2.2.1;lineage4.1.2 | 4 |
| lineage1.2.2.1;lineage2.2.1 | 1 |
| lineage1.1.1.1;lineage2.2.1 | 27 |
| 9 | |
| lineage1.1.2;lineage1.1.3.3 | 7 |
| lineage1.2.2.1;lineage4 | 6 |
| lineage1.1.2;lineage1.2.2.2 | 12 |
| lineage1.1.3.3;lineage2.2.1 | 2 |
| lineage1.1.3.1;lineage3 | 3 |
| lineage1.1.2;lineage4.1.2.1 | 4 |
| lineage1.1.2;lineage2.2.1 | 15 |
| lineage1.1.3.1;lineage4.7 | 2 |
| lineage1.1.3.1;lineage1.2.2.2 | 3 |
| lineage1.2.2.2;lineage3 | 13 |
| lineage1.2.2.2;lineage4.1.1.3 | 2 |
| lineage1.1.2;lineage4.1.2 | 1 |
| lineage1.2.1.2;lineage2.2.1 | 1 |
| lineage1.1.3.2;lineage4.1.1.3 | 2 |
| lineage1.1.3.1;lineage4 | 5 |
| lineage1.2.2.2;lineage2.2.1 | 23 |
| lineage1.1.2;lineage1.1.3.1 | 6 |
| lineage1.2.1.2.1;lineage4 | 3 |
| lineage1.1.1.1;lineage6 | 1 |
| lineage1.2.2.2;lineage4 | 11 |
| lineage1.1;lineage4 | 1 |
| lineage1.1.1;lineage2.2.1 | 8 |
| lineage4.3.2.1 | 1 |
| lineage1.2.2.2;lineage3.1.2 | 1 |
| La1.3;lineage1.2.2.2 | 15 |
| lineage1.1.2;lineage2.2.1.2 | 1 |
| lineage1.2.2.2;lineage4.1;lineage4.3.3 | 1 |
| lineage1.1.1.1;lineage4.2.1 | 2 |
| lineage1.2.1.2.1;lineage4.4.2 | 1 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage1.1.2;lineage4.1.3 | 1 |
| lineage1.1.2;lineage4.8 | 3 |
| lineage1.1.2;lineage3 | 18 |
| lineage1.1.3.1;lineage4.3.4.2 | 1 |
| lineage1.1.2;lineage4.4 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 2 |
| lineage1.1.3.1;lineage3.1 | 1 |
| lineage1.1.2;lineage3.1.1;lineage4 | 1 |
| lineage1.1.3;lineage3 | 1 |
| lineage1.1.2;lineage4.3.4.2.1 | 2 |
| lineage1.1.1;lineage2.2.1.2 | 2 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4.9 | 1 |
| lineage1.1.2;lineage2 | 2 |
| lineage1.1.3;lineage1.2.2.2 | 1 |
| La1.3;lineage1.2.1.2.1 | 1 |
| lineage1.2.1.2.1;lineage2.2.2;lineage4.1.2;lineage4.2.2 | 1 |
| lineage1.1.1;lineage2.2 | 1 |
| lineage1.2.2.2;lineage4.3.2.1 | 3 |
| La1;lineage1.1.2 | 2 |
| lineage4.9 | 13 |
| lineage1.2.2.1;lineage4.3.4.2.1 | 3 |
| lineage1.1.3.2;lineage4.1.2 | 1 |
| lineage1.1.2;lineage4.3.2.1 | 2 |
| lineage1.1.3.2;lineage4.3.4.2.1 | 4 |
| lineage1.1.1.1;lineage2.2.1.1 | 8 |
| lineage1.1.1.1;lineage4.4 | 1 |
| lineage1.1.1;lineage4.2.2 | 1 |
| lineage2.2.1 | 3 |
| lineage1.1.2;lineage3.1.1 | 7 |
| lineage1.2.2.1;lineage4.9 | 1 |
| lineage1.1.3.2;lineage4.3.4.2 | 1 |
| lineage1.2.2.2;lineage4.2 | 1 |
| lineage1 | 12 |
| lineage1.2.2.1;lineage4.8.1 | 1 |
| lineage1.1.3.2;lineage4 | 7 |
| lineage1.1.3.2;lineage4.3.4.1 | 1 |
| lineage1.1.3.3;lineage2.2.1;lineage3 | 1 |
| lineage1.1.1.1;lineage4.8 | 1 |
| lineage1.1.2;lineage3.1.2 | 3 |
| lineage1.1.2;lineage1.1.3 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2;lineage4 | 1 |
| lineage1.1.1;lineage1.1.3.3 | 1 |
| lineage1.2.2.1;lineage4.9.1 | 1 |
| lineage1.2.1.2.1;lineage4.3 | 1 |
| lineage1.2.2.2;lineage4.8 | 1 |
| lineage1.1.3.2;lineage3.1.1 | 3 |
| lineage1.1.2;lineage1.1.3.1;lineage2.2.1 | 1 |
| lineage1.1.1.1;lineage4.2.2 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 2 |
| lineage1.1.1.1;lineage4 | 1 |
| lineage1.1.2;lineage4.1 | 3 |
| lineage1.1.3.1;lineage2.2.1 | 5 |
| lineage1.1.1.1;lineage4.1 | 1 |
| lineage1.1.1.1;lineage2.2.1;lineage4.4.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.9 | 1 |
| lineage1.2.1.2.1;lineage4.3.4.1 | 1 |
| lineage1.2.2.2;lineage3;lineage4.4.1.1 | 1 |
| lineage1.2.1.2.1;lineage4.5 | 1 |
| lineage1.1.3.2;lineage1.2.2.2 | 4 |
| lineage1.1.2;lineage4.1.1.3 | 4 |
| lineage1.2.2.2;lineage3.1.2.1 | 1 |
| lineage1.1.3;lineage4.3.3 | 1 |
| lineage1.1.2;lineage4.7 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage1.2.2;lineage3.1.2 | 1 |
| lineage4 | 1 |
| lineage1.1.1.1;lineage4.4.2 | 2 |
| lineage1.1.1;lineage2.2.1.1 | 1 |
| lineage1.1.1.1;lineage4.5 | 1 |
| lineage1.1.2;lineage4.9.1 | 1 |
| lineage1.1.2;lineage1.1.3.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3 | 2 |
| La1.1;lineage1.2.2.2 | 1 |
| lineage1.1.1.1;lineage2.2 | 2 |
| lineage1.1.2;lineage1.2.2.2;lineage4 | 1 |
| lineage1.2.2.2;lineage4.3.3 | 3 |
| lineage1.2.2.2;lineage4.1.2.1 | 1 |
| lineage1.1.3;lineage2.2.1 | 1 |
| lineage1.1.3.1;lineage1.2.1.2.1 | 1 |
| lineage1.1.1;lineage4 | 2 |
| lineage1.1.1.1;lineage1.2.1.2.1 | 2 |
| lineage1.2.2.2;lineage4.3.4.2.1 | 2 |
| lineage1.1.2;lineage3.1.1;lineage4.6.1.1 | 1 |
| lineage1.1.1;lineage4.8 | 1 |
| lineage1.2.1.2;lineage4.5 | 1 |
| lineage1.1.2;lineage4.3.3 | 2 |
| lineage1;lineage3 | 1 |
| lineage1.1.3.1;lineage2.2.1.2 | 1 |
| lineage1.1;lineage4.1.3 | 1 |
| lineage1.2.1.2.1;lineage1.2.2 | 1 |
| lineage1.1.2;lineage4.9 | 2 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage1.1.1;lineage4.1.1.3;lineage4.6.2.2 | 1 |
| lineage1.1.3.2;lineage3.1.1;lineage4 | 1 |
| lineage1.1.3.2;lineage4.1.2.1 | 1 |
| lineage1.1.2;lineage4.2.2.2 | 1 |
| lineage1.2.1.2.1;lineage4.1.2.1 | 1 |
| lineage1.1.3.3;lineage4 | 3 |
| lineage1.1.3.2;lineage3.1.2 | 1 |
| lineage1.1.3.2;lineage2.2.1 | 1 |
| La1.1;lineage1.2.1.2.1 | 1 |
| lineage1.1.3.1;lineage3;lineage4.4.2 | 1 |
| lineage1.2.1.2.1;lineage3 | 1 |
| lineage1.1.2;lineage4.3.4.2.1;lineage4.4 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4 | 1 |
| lineage1.2.2.1;lineage4.1.1.1 | 1 |
| lineage1.2.2.2;lineage4.8.1 | 1 |
| La1.8;lineage1.2.2.2 | 1 |
| lineage1.2.1.1;lineage4 | 2 |
| lineage1.1;lineage3.1.2 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage1.1;lineage2.2.1 | 1 |
| lineage1.1.3;lineage4.2.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage1.2.2.2;lineage2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1 | 1 |
| lineage1.1.2;lineage4.2.2 | 1 |
| lineage1.1.3.1;lineage4.1.3 | 1 |
| lineage1.1.3.1;lineage4.3.3 | 1 |
| lineage1.1.1.1;lineage4.1.2.1 | 1 |
| lineage3 | 1 |
| lineage1.2.1.1;lineage4.1.1.1 | 1 |
| lineage1.1;lineage1.2.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4 | 1 |
| lineage1.1.2;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage1.1.2;lineage2.2.1.1 | 2 |
| lineage1.2.1.2;lineage3 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2 | 1 |
| lineage1.1.1.1;lineage1.1.2 | 1 |
| lineage1.1.2;lineage3;lineage4 | 1 |
| lineage1.1.1;lineage1.2.1.2.1 | 1 |
| lineage1.2.2.2;lineage4.1.1.1 | 2 |
| lineage1.2.2.2;lineage4.1.2 | 1 |
| lineage1.2.2.1;lineage4.3.4.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 17691 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 17691 rows and could cause your browser to crash if rendered.
