Rv1305 - c.-26C>A
Drug resistance types
71 Sensitive
0 RR-TB
5 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.2 | 1 |
| lineage4.9 | 8 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 4 |
| La1.8.1 | 8 |
| La1.7.1 | 5 |
| lineage3.1.1 | 3 |
| lineage4.8.2 | 1 |
| lineage4.3.3 | 3 |
| lineage4 | 1 |
| lineage3 | 20 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage5.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1 | 4 |
| lineage4.1.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.3.2;lineage4.1.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.2.2;lineage4.1.2;lineage2.2.2;lineage1.2.1.2.1 | 1 |
| lineage4.6.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage1.2.2 | 1 |
| lineage4.1.3 | 1 |
| lineage1.1.2 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 | 1 |
| lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.8 | 2 |
| lineage4.3.4.2.1;lineage1.1.3 | 1 |
| lineage4.1.1 | 3 |
| lineage4.2.2.2 | 1 |
| lineage3.1.2 | 6 |
| lineage1.2.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR125305 | Sensitive | lineage2.2.1.2 | None | SRR032219 | Sensitive | lineage4.9 | None | SRR125306 | Sensitive | lineage2.2.2 | None | SRR032220 | Sensitive | lineage4.9 | None | SRR121583 | Sensitive | lineage4.1.2.1 | None | SRR1657056 | Other | La1.8.1 | None | SRR1791873 | Other | La1.8.1 | None | SRR1791795 | Other | La1.8.1 | None | SRR1791865 | Other | La1.8.1 | None | SRR1791708 | Other | La1.7.1 | None | SRR1792201 | Other | La1.7.1 | None | SRR1792089 | Other | La1.8.1 | None | SRR1791907 | Other | La1.8.1 | None | SRR1792073 | Other | La1.7.1 | None | SRR1792184 | Other | La1.7.1 | None | SRR1792495 | Other | La1.7.1 | None | SRR18213753 | Sensitive | lineage3.1.1 | None | SRR305201 | Sensitive | lineage4.9 | None | SRR18213914 | Sensitive | lineage4.8.2 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21677858 | Sensitive | lineage4 | None | SRR2467265 | Sensitive | lineage3 | None | SRR2100089 | Sensitive | lineage3 | None | SRR3105788 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR234142 | Sensitive | lineage5.1.1 | None | ERR233363 | Sensitive | lineage1.1.1 | None | ERR245716 | Sensitive | lineage2.2.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245809 | Sensitive | lineage4.3.4.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR245801 | Other | lineage4.3.4.2.1 | None | ERR245820 | Sensitive | lineage1.1.3.2 | None | ERR245816 | Sensitive | lineage4.1.2 | None | ERR245823 | Sensitive | lineage4.1.1.3 | None | ERR245821 | Other | lineage4.3.4.2.1 | None | ERR245822 | Other | lineage1.1.3.2 | None | ERR233352 | Sensitive | lineage4.1.2.1 | None | SRR413224 | MDR-TB | lineage2.2.1 | None | SRR413231 | MDR-TB | lineage2.2.1 | None | SRR857281 | MDR-TB | lineage4.3.3 | None | SRR314729 | Sensitive | lineage4.9 | None | ERR1200628 | Sensitive | lineage4.1.2.1 | None | ERR025413 | Sensitive | lineage4.3.2;lineage4.1.2.1 | None | ERR025449 | Sensitive | lineage4.3 | None | ERR025437 | HR-TB | lineage4.2.2;lineage4.1.2;lineage2.2.2;lineage1.2.1.2.1 | None | ERR027466 | Sensitive | lineage4.9 | None | ERR027457 | HR-TB | lineage4.9 | None | ERR028330 | Sensitive | lineage4.6.1 | None | ERR028320 | Sensitive | lineage4.4.1.1 | None | ERR028318 | Sensitive | lineage6.3.1 | None | ERR028352 | Sensitive | lineage3.1.1 | None | ERR028337 | Sensitive | lineage1.2.2 | None | ERR028365 | Sensitive | lineage4.1.3 | None | ERR028349 | Sensitive | lineage4.3.4.2.1 | None | ERR028361 | HR-TB | lineage4.1.1.3 | None | ERR028355 | Other | lineage1.1.2 | None | ERR036237 | Sensitive | lineage4.3.4.2.1 | None | ERR036198 | Other | lineage4.3.4.2 | None | ERR036211 | Other | lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 | None | ERR036185 | MDR-TB | lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR036215 | Other | lineage4.8 | None | ERR036224 | HR-TB | lineage4.3.4.2.1;lineage1.1.3 | None | ERR046740 | Sensitive | lineage4.1.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | ERR038267 | Sensitive | lineage4.2.2.2 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR040092 | Sensitive | lineage3.1.1 | None | ERR046731 | Sensitive | lineage4.1.1 | None | ERR046774 | Other | La1.8.1 | None | ERR046750 | Other | La1.8.1 | None | ERR046742 | Sensitive | lineage4.1.1 | None | ERR046802 | Sensitive | lineage3.1.2 | None | ERR046810 | Sensitive | lineage3.1.2 | None | ERR046805 | Sensitive | lineage3 | None | ERR046806 | Sensitive | lineage3 | None | ERR046801 | Sensitive | lineage3 | None | ERR046812 | Sensitive | lineage3 | None | ERR046803 | Sensitive | lineage3 | None | ERR046807 | Sensitive | lineage3 | None | ERR046814 | Sensitive | lineage3 | None | ERR046809 | Sensitive | lineage3 | None | ERR046808 | Sensitive | lineage3 | None | ERR046811 | Sensitive | lineage3 | None | ERR046804 | Sensitive | lineage3 | None | ERR046816 | Other | lineage3.1.2 | None | ERR046813 | Sensitive | lineage3 | None | ERR046828 | Sensitive | lineage3 | None | ERR046817 | Sensitive | lineage4.9 | None | ERR046815 | Sensitive | lineage3.1.2 | None | ERR046826 | Sensitive | lineage3 | None | ERR046818 | Sensitive | lineage3.1.2 | None | ERR046829 | Sensitive | lineage3 | None | ERR046830 | Sensitive | lineage3.1.2 | None | ERR046896 | Sensitive | lineage1.1.2 | None | ERR046827 | Sensitive | lineage3 | None | ERR046886 | Sensitive | lineage1.2.2.1 | None | ERR046902 | Sensitive | lineage4.1.1.3 | None | ERR046955 | Sensitive | lineage4.1.2.1 | None | ERR046909 | Sensitive | lineage4.9 | None | ERR046979 | Sensitive | lineage3 | None | ERR046977 | MDR-TB | lineage4.8 | None | ERR046978 | Sensitive | lineage1.1.2 | None | ERR046987 | Sensitive | lineage3 | None | ERR1161620 | MDR-TB | lineage2.2.1 | None | ERR046985 | MDR-TB | lineage4.1.1.3.1 | None |
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