lineage | Count |
---|---|
lineage2.2.1 | 24 |
lineage4.3.4.2.1 | 1 |
lineage4.5 | 8 |
lineage2.2.1.2 | 1 |
lineage2.2.1.1 | 4 |
lineage4.3.2.1 | 1 |
lineage4.8 | 2 |
lineage3 | 1 |
lineage4.2.2 | 6 |
lineage4.9 | 1 |
lineage4.4.2 | 2 |
spoligotype | Count |
---|---|
None | 51 |
ID | Drug resistance | Lineage | Country iso2 | SRR1723804 | MDR-TB | lineage2.2.1 | cn | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | ERR8025645 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723853 | MDR-TB | lineage2.2.1 | cn | SRR1723709 | Sensitive | lineage2.2.1 | cn | SRR1723783 | RR-TB | lineage2.2.1 | None | SRR1723953 | Sensitive | lineage4.5 | cn | SRR1723920 | Sensitive | lineage4.5 | cn | SAMN03246269 | MDR-TB | lineage2.2.1 | cn | ERR2179593 | Sensitive | lineage4.5 | cn | SRR1723786 | Pre-XDR-TB | lineage2.2.1.2 | cn | SAMN03246584 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723445 | Sensitive | lineage2.2.1 | cn | SRR1723838 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN03246408 | MDR-TB | lineage2.2.1 | cn | SAMN03246252 | HR-TB | lineage2.2.1 | cn | SRR1723849 | Sensitive | lineage2.2.1 | cn | ERR2179580 | Sensitive | lineage4.5 | cn | SRR1723688 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR4034064 | Sensitive | lineage4.3.2.1 | None | SRR1723597 | Sensitive | lineage2.2.1 | cn | SRR1723961 | Sensitive | lineage4.8 | cn | SAMN03246463 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN03246537 | RR-TB | lineage2.2.1 | cn | ERR2179587 | Sensitive | lineage4.5 | cn | SRR1723937 | Sensitive | lineage4.5 | cn | SRR1723494 | Other | lineage2.2.1 | cn | SAMN03246276 | MDR-TB | lineage2.2.1 | cn | SRR1723413_SRR1723412 | MDR-TB | lineage3 | None | SRR1723687 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR1724012 | Sensitive | lineage4.2.2 | cn | SRR1723493 | RR-TB | lineage2.2.1 | cn | SRR1723705 | MDR-TB | lineage2.2.1.1 | None | ERR2179600 | Sensitive | lineage4.5 | cn | SRR1723747 | MDR-TB | lineage2.2.1 | None | SAMN03246242 | MDR-TB | lineage2.2.1 | cn | SRR1723721 | MDR-TB | lineage2.2.1 | cn | SRR1723861 | Sensitive | lineage2.2.1 | cn | ERR2179671 | MDR-TB | lineage4.2.2 | cn | ERR2179609 | Sensitive | lineage4.8 | cn | SRR1723731 | HR-TB | lineage2.2.1 | cn | ERR2179582 | Sensitive | lineage4.2.2 | cn | SRR1723581 | Sensitive | lineage2.2.1 | cn | ERR4828391 | Sensitive | lineage4.9 | None | ERR2179578 | Sensitive | lineage4.4.2 | cn | SRR1723929 | Sensitive | lineage4.5 | cn | ERR2179670 | MDR-TB | lineage4.2.2 | cn | SRR1723702 | Sensitive | lineage2.2.1.1 | cn | SRR1724009 | MDR-TB | lineage4.2.2 | cn | SRR1723987 | Sensitive | lineage4.4.2 | cn | SRR1724011 | MDR-TB | lineage4.2.2 | cn |
---|