lineage | Count |
---|---|
lineage2.2.1 | 12 |
La1.8.1 | 5 |
lineage1.2.1.2.1 | 1 |
lineage4.8 | 17 |
lineage1.1.2 | 3 |
lineage4.4.2 | 2 |
lineage4 | 1 |
lineage4.1.2.1 | 5 |
La1.7 | 1 |
lineage3 | 8 |
lineage3.1.2.2 | 1 |
lineage4.3.3 | 3 |
1 | |
lineage4.8.1 | 2 |
lineage3.1.1 | 3 |
lineage4.3.1 | 1 |
lineage4.9 | 2 |
La1.2.BCG | 1 |
lineage4.4.1.1 | 3 |
lineage4.1.1.2 | 1 |
lineage3.1.2 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.1 | 1 |
lineage4.1.2 | 1 |
lineage4.6.1.1 | 1 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | ERR5863892 | MDR-TB | lineage2.2.1 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR5863781 | Pre-XDR-TB | lineage2.2.1 | None | ERR3468742 | Other | La1.8.1 | None | ERR5863820 | MDR-TB | lineage2.2.1 | None | ERR5864911 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864180 | MDR-TB | lineage2.2.1 | None | ERR6336753 | RR-TB | lineage1.2.1.2.1 | None | ERR5866249 | RR-TB | lineage4.8 | None | ERR5908246 | Sensitive | lineage1.1.2 | None | ERR5866230 | MDR-TB | lineage2.2.1 | None | ERR9124898 | Sensitive | lineage4.4.2 | None | ERR7801185 | Sensitive | lineage2.2.1 | None | ERR8773859 | HR-TB | lineage4 | None | ERR9117796 | Sensitive | lineage4.8 | None | SRR13232404 | MDR-TB | lineage2.2.1 | None | SRR6207277 | MDR-TB | lineage2.2.1 | None | SRR1573707 | Sensitive | lineage4.4.2 | None | SRR1792047 | HR-TB | La1.8.1 | None | SRR13870394 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR17156530 | Other | La1.7 | None | ERR4815289 | Other | lineage3 | None | ERR2229230 | Sensitive | lineage4.8 | None | ERR4814811 | Sensitive | lineage3.1.2.2 | None | ERR4815549 | Sensitive | lineage4.3.3 | None | SRR3675391 | Sensitive | lineage3 | gb | ERR1950067 | Sensitive | lineage4.8 | None | ERR2229196 | Sensitive | lineage4.8 | dk | SRR3732699 | MDR-TB | lineage4.3.3 | None | ERR4816545 | Other | None | ERR2229683 | Sensitive | lineage4.8 | dk | ERR2199789 | Sensitive | lineage4.8 | de | ERR2229678 | HR-TB | lineage4.8 | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR2229469 | Sensitive | lineage4.8 | None | ERR4817262 | Other | lineage4.8 | None | ERR2228880 | Sensitive | lineage4.8 | dk | ERR2228892 | Sensitive | lineage4.8 | dk | ERR2228906 | Sensitive | lineage4.8 | None | ERR2446295 | Sensitive | lineage4.1.2.1 | nl | ERR4815813 | Sensitive | lineage4.8.1 | None | ERR4819012 | Other | lineage1.1.2 | None | ERR3275443 | Sensitive | lineage3.1.1 | nl | ERR4817789 | Sensitive | lineage4.3.1 | None | ERR2510686 | Pre-XDR-TB | lineage2.2.1 | it | ERR2513296 | Other | lineage4.1.2.1 | gb | ERR4818549 | Sensitive | lineage4.9 | None | ERR2512474 | HR-TB | lineage1.1.2 | None | ERR4818908 | Other | La1.2.BCG | None | ERR2503362 | Sensitive | lineage4.8 | None | ERR2503404 | Sensitive | lineage4.1.2.1 | None | ERR2514305 | Other | lineage3 | None | ERR2513884 | Sensitive | lineage3 | None | ERR3275580 | Sensitive | lineage4.1.2.1 | nl | ERR4821980 | Sensitive | lineage3 | None | SRR5341218 | MDR-TB | lineage4.3.3 | None | ERR4820748 | Other | lineage3 | None | SRR5431794 | Other | La1.8.1 | None | ERR4821938 | Sensitive | lineage4.4.1.1 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045860 | Sensitive | lineage4.1.1.2 | None | ERR2446176 | Sensitive | lineage3.1.1 | nl | SRR6045381 | Sensitive | lineage3.1.2 | None | ERR4972579 | MDR-TB | lineage4.1.2.1.1 | None | SRR6896303 | HR-TB | lineage4.4.1.1 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6982172 | Other | lineage4.4.1.1 | None | SRR6785360 | Sensitive | lineage4.1 | None | SRR6832616 | Sensitive | lineage4.1.2 | None | SRR6785510 | Sensitive | lineage4.8 | None | SRR6797772 | Sensitive | lineage3 | None | SRR6832670 | Sensitive | lineage4.8 | None | SRR9940980 | Sensitive | lineage4.9 | None | SRR7535038 | Sensitive | lineage4.6.1.1 | None | SRR7829576 | Pre-XDR-TB | lineage2.2.1 | None | SRR8600144 | Other | La1.8.1 | None | SRR8600281 | Other | La1.8.1 | None |
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