lineage | Count |
---|---|
lineage4.9 | 1 |
lineage4.5 | 2 |
lineage2.2.1 | 5 |
lineage2.2.2 | 3 |
lineage1.1.2 | 4 |
lineage1.1.1 | 1 |
lineage3 | 2 |
lineage3.1.2.1 | 2 |
lineage4.3.3 | 5 |
lineage4.1.1.3 | 2 |
lineage6.3.3 | 1 |
lineage1.1.3.1 | 1 |
lineage4.3.2.1 | 3 |
lineage3;lineage4 | 1 |
spoligotype | Count |
---|---|
None | 33 |
ID | Drug resistance | Lineage | Country iso2 | SRR1964924 | HR-TB | lineage4.9 | None | ERR3132291 | RR-TB | lineage4.5 | None | ERR12350670 | MDR-TB | lineage2.2.1 | None | ERR11138658 | Pre-XDR-TB | lineage2.2.2 | None | SRR1175035 | Sensitive | lineage1.1.2 | None | ERR7902697 | MDR-TB | lineage1.1.1 | None | ERR1213839 | RR-TB | lineage4.5 | kr | ERR4811136 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829970 | MDR-TB | lineage3 | pk | SRR29772540 | MDR-TB | lineage3 | None | SRR1172939 | Sensitive | lineage1.1.2 | None | ERR12350671 | MDR-TB | lineage2.2.1 | None | SRR22424879 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR4800165 | Pre-XDR-TB | lineage4.3.3 | None | SRR20969666 | MDR-TB | lineage2.2.1 | None | ERR11138653 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02599145 | Sensitive | lineage1.1.2 | in | ERR9030373 | HR-TB | lineage1.1.2 | None | ERR4813448 | Pre-XDR-TB | lineage4.3.3 | pe | ERR11044660 | MDR-TB | lineage2.2.1 | None | SRR28046126 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4798327 | Pre-XDR-TB | lineage3.1.2.1 | in | ERR11138650 | Pre-XDR-TB | lineage2.2.2 | None | SRR22461606 | Pre-XDR-TB | lineage4.3.3 | None | ERR10680124 | MDR-TB | lineage6.3.3 | None | SRR12882472 | Sensitive | lineage1.1.3.1 | None | ERR9806843 | MDR-TB | lineage4.3.2.1 | None | ERR10610188 | MDR-TB | lineage4.3.2.1 | None | ERR3287861 | MDR-TB | lineage4.3.3 | pe | ERR4812871 | HR-TB | lineage4.3.3 | None | ERR9993114 | XDR-TB | lineage4.1.1.3 | None | ERR11775030 | MDR-TB | lineage4.3.2.1 | None | ERR4829940 | Pre-XDR-TB | lineage3;lineage4 | pk |
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