Rv1484 - c.-777C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
4256 HR-TB
8303 MDR-TB
5590 Pre-XDR-TB
465 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6283 |
| lineage4.3.3 | 1898 |
| lineage2.2.2 | 766 |
| lineage4.1.1 | 60 |
| lineage4.2.1 | 1809 |
| lineage1.1.1 | 101 |
| lineage3.1.2 | 22 |
| lineage4.1.2.1 | 931 |
| lineage4.8 | 763 |
| lineage4.2.1.1 | 83 |
| lineage2.2.1.1 | 423 |
| lineage4.3.4.2.1 | 35 |
| lineage3 | 356 |
| lineage1.1.2 | 306 |
| lineage4.6.2.2 | 652 |
| lineage1.1.1.1 | 96 |
| lineage4.3.4.1 | 260 |
| lineage2.2.1;lineage4.3.3 | 43 |
| lineage4.3.2 | 59 |
| lineage4.4.1.1 | 257 |
| lineage4.1.2 | 97 |
| lineage4.6.1.2 | 59 |
| lineage1.2.1.2.1 | 361 |
| lineage4.3.4.2 | 487 |
| lineage4.3.2.1 | 95 |
| lineage4.1.1.3 | 329 |
| lineage4.1.1.1 | 36 |
| lineage4.2.2.1 | 145 |
| lineage4.9 | 123 |
| lineage4.4 | 11 |
| lineage4.4.1 | 3 |
| lineage4.8.1 | 39 |
| lineage4.1 | 16 |
| lineage1.2.2.2 | 236 |
| lineage1.1.3.3 | 29 |
| lineage3.1 | 29 |
| lineage4.2.2 | 57 |
| lineage4.3 | 38 |
| lineage1.1.3.2 | 15 |
| lineage4.6 | 23 |
| lineage4 | 48 |
| lineage4.2.2.2 | 26 |
| lineage4.5 | 183 |
| lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4 | 14 |
| lineage4.2.1;lineage4.8 | 10 |
| lineage7 | 1 |
| lineage2.2.1;lineage4.2 | 1 |
| lineage2.2.1;lineage4.2.1 | 56 |
| La3 | 2 |
| lineage1.2.1.2 | 102 |
| lineage1.1.3 | 9 |
| lineage4.1.1.3.1 | 47 |
| lineage1.1.3.1 | 44 |
| lineage2.2.1;lineage4.4.1.1 | 3 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.1;lineage4.5 | 5 |
| lineage3.1.3 | 12 |
| lineage1.2.2.1 | 34 |
| lineage2.2.1;lineage4.7 | 1 |
| lineage2.2.1;lineage4.3.2.1 | 3 |
| lineage2.2.1;lineage3 | 24 |
| lineage4.1.2.1;lineage4.3.3 | 11 |
| lineage2.2.1;lineage4.3.2 | 4 |
| lineage4.4.2 | 36 |
| lineage4.1.1.2 | 8 |
| lineage2.1 | 29 |
| lineage4.6.1.1 | 17 |
| lineage1.2.1.1 | 6 |
| lineage4.3.4 | 4 |
| lineage4.2 | 5 |
| lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | 1 |
| lineage1.1.1;lineage4.2.2 | 1 |
| lineage4.1.2.1;lineage4.2.1 | 6 |
| lineage3.1.2.1 | 24 |
| lineage5.1.1 | 15 |
| lineage2.2.1;lineage4.1.2.1 | 21 |
| lineage2.2.1;lineage2.2.2 | 12 |
| lineage1;lineage2.2.1;lineage3;lineage4 | 1 |
| lineage2.2.1.2 | 14 |
| lineage3;lineage4.6.2.2 | 1 |
| lineage2.2.1;lineage3.1.2 | 3 |
| lineage4.7 | 28 |
| lineage1.2.2.2;lineage4.1;lineage4.3.3 | 1 |
| lineage1.2.1.2.1;lineage4 | 1 |
| lineage6.3.1 | 11 |
| lineage4.6.1 | 4 |
| lineage4.8.2 | 5 |
| lineage6.2.1 | 1 |
| lineage2.2.1;lineage4.1 | 1 |
| lineage1.1.1.1;lineage2.2.1 | 2 |
| lineage4.1.1.3;lineage4.8 | 4 |
| lineage2.2.1;lineage4.8 | 7 |
| lineage2.2.1;lineage3;lineage4.8 | 2 |
| lineage4.1.2.1;lineage4.8 | 4 |
| lineage2.2.1.2;lineage4.1.1.3 | 1 |
| lineage5.1 | 6 |
| lineage4.6.2 | 3 |
| lineage4.3.3;lineage4.8 | 5 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.1;lineage4.3.3 | 5 |
| lineage3.1.1 | 17 |
| lineage2.2.1;lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage1.1.3.1;lineage3.1 | 1 |
| lineage4.6.3 | 5 |
| lineage2.2.1;lineage4.2.1.1 | 5 |
| lineage1.2.2.2;lineage2.2.1 | 6 |
| lineage2.2.1;lineage4.2.2 | 1 |
| lineage4.4.1.1;lineage4.6.1.2 | 4 |
| lineage4.1.3 | 19 |
| lineage2.2.1.1;lineage3 | 3 |
| lineage2.2;lineage4.2.1 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 2 |
| lineage2.2.1.1;lineage4.3.2.1;lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.3.2 | 1 |
| 4 | |
| lineage3;lineage4.4 | 3 |
| lineage3;lineage4.1.1.3 | 2 |
| lineage1.2.2 | 2 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4.9 | 1 |
| lineage4.4.1.2 | 9 |
| lineage3;lineage4.3.3 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.3.3;lineage4.3.4.2 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.1;lineage4.3 | 3 |
| lineage4.3.1 | 10 |
| lineage4.3.2.1;lineage4.3.4.1 | 1 |
| lineage4.3.2;lineage4.3.3 | 3 |
| lineage5.1.2 | 3 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 1 |
| lineage2.2.2;lineage4.1.1.3 | 1 |
| M.canetti;lineage2.2 | 1 |
| lineage2.2;lineage4.1.2.1 | 2 |
| lineage1.1.2;lineage2.2.1 | 2 |
| lineage2.2.2;lineage3 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2;lineage4 | 1 |
| lineage2.2.1;lineage4.1.2;lineage4.3.3 | 1 |
| lineage2.2.1.1;lineage2.2.2 | 3 |
| lineage4.1.2.1;lineage4.3.4.1 | 4 |
| lineage2.2.1;lineage4.4.1.1.1 | 1 |
| La1.7.1 | 2 |
| lineage2.2.2;lineage4.1.2.1 | 2 |
| lineage6.1.3 | 1 |
| lineage6.1.1 | 3 |
| lineage2.2.2;lineage4 | 3 |
| lineage4.1.4 | 2 |
| lineage1.1.3;lineage4 | 1 |
| lineage2.2.1.1;lineage4.1.2 | 2 |
| lineage2.2 | 1 |
| lineage4.6.2.2;lineage4.9 | 1 |
| lineage4.3.4.2;lineage4.8 | 1 |
| lineage1.2.2.2;lineage4.8 | 1 |
| lineage2.2.1;lineage4.2.1;lineage4.8 | 1 |
| lineage5.2 | 1 |
| lineage1.1.1.1;lineage4.5 | 1 |
| lineage4.6.5 | 6 |
| lineage2.2;lineage3 | 1 |
| lineage4.1.2;lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4.3.4.2 | 1 |
| lineage4.1.2.1;lineage4.2.2.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.9 | 1 |
| lineage4.6.2.2;lineage6.3.1 | 2 |
| lineage4.3.4.1;lineage4.3.4.2 | 2 |
| lineage2.2.1.1;lineage4.3.2.1 | 1 |
| lineage1.1.1;lineage1.2.1.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.6.4 | 1 |
| lineage2.2.1;lineage4.1.1.3 | 4 |
| lineage2.2.1;lineage4.1.2 | 1 |
| lineage2.2.1;lineage3;lineage4.3.2 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.3 | 1 |
| lineage2.2.1.1;lineage4.1.1.3 | 1 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.1.2.1;lineage4.3.4.2 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage2.2.1;lineage4.4.1.2 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.1.1.1;lineage1.2.1.2.1 | 1 |
| lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage3.1.2;lineage4.9 | 1 |
| lineage2.2.2;lineage4.3.2.1 | 2 |
| lineage1.1.3;lineage2.2.1 | 1 |
| lineage2.2.1;lineage3;lineage4.1.2;lineage4.2.2;lineage4.9 | 1 |
| lineage2.2.1;lineage3;lineage4.2.2.2 | 1 |
| lineage1 | 1 |
| lineage6.2.2 | 1 |
| lineage4.1.1;lineage4.1.2.1 | 2 |
| lineage2.2.1;lineage3;lineage4.9 | 1 |
| lineage2.2.1.1;lineage4.5 | 1 |
| lineage1;lineage3 | 1 |
| La1.3;lineage1.2.2.2 | 1 |
| lineage2.2;lineage4.3.3 | 1 |
| lineage4.3.4.1;lineage4.4.1.1 | 1 |
| lineage3;lineage4.6.2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage1.2.1 | 2 |
| lineage2.2.2;lineage4.9 | 2 |
| lineage1.2.2.2;lineage4.3.3 | 1 |
| lineage2.2.1.1;lineage4.8 | 2 |
| lineage5.1.4 | 1 |
| lineage2.2.1;lineage3.1 | 1 |
| lineage2.2.1;lineage3;lineage4 | 2 |
| lineage4.6.1.1;lineage4.7 | 1 |
| lineage3;lineage4.5 | 1 |
| lineage2.2.1;lineage4.1;lineage4.3.3 | 1 |
| lineage2.2;lineage4.5 | 1 |
| lineage1.1.2;lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4 | 1 |
| lineage1.1.2;lineage4.2.2.2 | 1 |
| lineage4.3.3;lineage4.3.4.1 | 1 |
| lineage4.2.1;lineage4.4.1.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.4.2 | 1 |
| lineage4.2.2;lineage4.6.2.2 | 1 |
| lineage2.2.1;lineage4.1.1.3;lineage4.3.2.1 | 1 |
| lineage3;lineage4.6.2.1 | 1 |
| lineage1.2.1.2.1;lineage2.2.1 | 1 |
| lineage1.1.3.1;lineage4.1.3 | 1 |
| lineage4.6.1.2;lineage4.7 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2 | 1 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage4.1.2;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 18614 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 18614 rows and could cause your browser to crash if rendered.
