Rv1484 - p.Ala239Val
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
78 RR-TB
13 HR-TB
28 MDR-TB
11 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| lineage1.2.2.2 | 11 |
| lineage4.1.2.1;lineage4.9 | 36 |
| lineage4.1.2.1 | 42 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.2.1 | 6 |
| lineage1.1.1.1 | 7 |
| lineage2.1 | 2 |
| lineage1.1.2 | 4 |
| lineage1.1.3.1 | 3 |
| lineage4.1.2 | 2 |
| lineage3 | 3 |
| lineage4.8 | 3 |
| lineage4.5 | 2 |
| lineage1.2.1.2 | 2 |
| 1 | |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 131 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10147689 | MDR-TB | lineage2.2.1 | None | SRR21887667 | Pre-XDR-TB | lineage2.2.1 | None | SRR29016825 | MDR-TB | lineage1.2.2.2 | None | SRR1222936 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1229622 | RR-TB | lineage4.1.2.1 | None | SRR1222405 | RR-TB | lineage4.1.2.1 | None | SRR1231818 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1232424 | RR-TB | lineage4.1.2.1 | None | SRR1221157 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1222866 | RR-TB | lineage4.1.2.1;lineage4.9 | None | ERR9027232 | HR-TB | lineage1.2.1.2.1 | None | ERR13261050 | MDR-TB | lineage1.2.2.2 | None | SRR1221666 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1233405 | RR-TB | lineage4.1.2.1 | None | SRR1232096 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1222411 | RR-TB | lineage4.1.2.1 | None | SRR1218488 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR28868764 | HR-TB | lineage1.2.2.2 | None | SRR1220118 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1221187 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1223196 | RR-TB | lineage4.1.2.1 | None | ERR4809304 | XDR-TB | lineage4.3.2.1 | za | SRR1221641 | RR-TB | lineage4.1.2.1;lineage4.9 | None | ERR2516616 | MDR-TB | lineage4.1.2.1 | pe | SRR1232999 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1223519 | RR-TB | lineage4.1.2.1 | None | SRR26331614 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR10225430 | HR-TB | lineage1.2.2.2 | None | SRR5073720 | HR-TB | lineage1.1.1.1 | vn | SRR1214763 | RR-TB | lineage4.1.2.1 | None | SRR1228678 | RR-TB | lineage4.1.2.1 | None | SRR1226993 | RR-TB | lineage4.1.2.1 | None | ERR2515407 | Pre-XDR-TB | lineage4.3.2.1 | za | ERR9806710 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR11662293 | MDR-TB | lineage2.1 | None | ERR13260052 | MDR-TB | lineage1.1.2 | None | SRR1232666 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1232797 | RR-TB | lineage4.1.2.1 | None | ERR4553952 | RR-TB | lineage1.1.3.1 | None | SRR1228669 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1221259 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1222265 | RR-TB | lineage4.1.2.1 | None | SRR11662424 | MDR-TB | lineage1.1.1.1 | None | SRR1226230 | RR-TB | lineage4.1.2.1 | None | SRR1220254 | RR-TB | lineage4.1.2.1 | None | SRR29231839 | MDR-TB | lineage4.1.2 | None | SRR1214388 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR29289260 | Pre-XDR-TB | lineage3 | None | SRR1218657 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR29017493 | HR-TB | lineage1.1.1.1 | None | SRR1232863 | RR-TB | lineage4.1.2.1 | None | SRR1222374 | RR-TB | lineage4.1.2.1 | None | SRR22250055 | HR-TB | lineage2.1 | None | SRR29081600 | MDR-TB | lineage4.8 | None | SRR1232824 | RR-TB | lineage4.1.2.1;lineage4.9 | None | ERR4797857 | MDR-TB | lineage1.2.2.2 | in | ERR4800429 | MDR-TB | lineage1.2.2.2 | in | SRR1231810 | RR-TB | lineage4.1.2.1 | None | SRR1215682 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1214140 | RR-TB | lineage4.1.2.1 | None | ERR751486 | MDR-TB | lineage4.1.2.1 | pe | SRR28351574 | MDR-TB | lineage1.2.2.2 | None | SRR1221031 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1217053 | RR-TB | lineage4.1.2.1 | None | SRR1225522 | RR-TB | lineage4.1.2.1 | None | SRR26159044 | MDR-TB | lineage1.1.2 | None | SRR1226187 | RR-TB | lineage4.1.2.1 | None | ERR13266804 | MDR-TB | lineage1.2.2.2 | None | SRR1219053 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1221612 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR11972276 | MDR-TB | lineage1.1.3.1 | None | SRR1214368 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1222999 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1218950 | RR-TB | lineage4.1.2.1;lineage4.9 | None | ERR10748266 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR26399164 | HR-TB | lineage1.1.1.1 | None | SRR29081642 | MDR-TB | lineage4.8 | None | SRR21576686 | MDR-TB | lineage4.5 | None | SRR1227561 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1220623 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1218487 | RR-TB | lineage4.1.2.1 | None | SRR1223221 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1231758 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR29081666 | MDR-TB | lineage4.8 | None | ERR13290944 | MDR-TB | lineage1.2.1.2 | None | SRR1228674 | RR-TB | lineage4.1.2.1 | None | SRR1232522 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR22250201 | HR-TB | lineage1.2.1.2 | None | SRR19295646 | MDR-TB | lineage1.1.2 | None | ERR13266662 | MDR-TB | lineage1.2.2.2 | None | SRR1228675 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1229834 | RR-TB | lineage4.1.2.1 | None | SRR29772558 | MDR-TB | lineage1.2.2.2 | None | SRR1214086 | RR-TB | lineage4.1.2.1 | None | SRR1213958 | RR-TB | lineage4.1.2.1 | None | SRR1214148 | RR-TB | lineage4.1.2.1 | None | SRR1214261 | RR-TB | lineage4.1.2.1 | None | SRR1214443 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1220223 | RR-TB | lineage4.1.2.1 | None | SRR1214397 | RR-TB | lineage4.1.2.1 | None | ERR2510250 | Pre-XDR-TB | lineage3 | pk | ERR4797676 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR4830748 | MDR-TB | lineage2.2.1 | ir | SRR29051246 | HR-TB | lineage1.1.1.1 | None | ERR13244683 | MDR-TB | lineage2.2.1 | None | SRR1232079 | RR-TB | lineage4.1.2.1 | None | SRR1232932 | RR-TB | lineage4.1.2.1 | None | ERR4553465 | RR-TB | None | ERR4828648 | HR-TB | lineage1.1.1.1 | None | ERR2707055 | MDR-TB | lineage4.1.2 | cd | ERR4828653 | HR-TB | lineage1.1.1.1 | vn | ERR1023294 | HR-TB | lineage1.2.1.1 | None | SRR1220253 | RR-TB | lineage4.1.2.1 | None | SRR1223486 | RR-TB | lineage4.1.2.1 | None | SRR1231812 | RR-TB | lineage4.1.2.1 | None | SRR1219241 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1214226 | RR-TB | lineage4.1.2.1 | None | ERR10610248 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR1215449 | RR-TB | lineage4.1.2.1 | None | SRR1232852 | RR-TB | lineage4.1.2.1 | None | SRR1223066 | RR-TB | lineage4.1.2.1;lineage4.9 | None | ERR13290754 | MDR-TB | lineage4.5 | None | SRR26056435 | HR-TB | lineage3 | None | ERR1353079 | Pre-XDR-TB | lineage2.2.1 | None | SRR1215686 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1222199 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1214087 | RR-TB | lineage4.1.2.1 | None | SRR29017171 | Pre-XDR-TB | lineage1.1.3.1 | None | SRR1215478 | RR-TB | lineage4.1.2.1;lineage4.9 | None | SRR1226235 | RR-TB | lineage4.1.2.1 | None | SRR15014600 | MDR-TB | lineage1.1.2 | None |
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