ERR4831533
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR4831542
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR4896317
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR9120120
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR9125420
|
HR-TB
|
lineage1.1.2
|
None
|
ERR9896092
|
HR-TB
|
lineage4.3.4.2
|
None
|
SAMN02360610
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
SRR16157041
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR9993014
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR2516557
|
XDR-TB
|
lineage4.1.4
|
pe
|
ERR2516828
|
MDR-TB
|
lineage1.2.2.2
|
gb
|
SRR17234881
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1723928
|
Pre-XDR-TB
|
lineage4.5
|
cn
|
ERR4799232
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
SRR21747055
|
MDR-TB
|
lineage4.5
|
None
|
SRR29017686
|
MDR-TB
|
lineage1.1.3
|
None
|
SRR6824578
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR13284456
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29341531
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR10748364
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR21732197
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SAMN02628503
|
Pre-XDR-TB
|
lineage4.8
|
ir
|
ERR13284345
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9806891
|
MDR-TB
|
lineage4.8
|
None
|
ERR5865462
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232597
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR184655
|
MDR-TB
|
lineage1.1.1.1
|
vn
|
ERR1034683
|
MDR-TB
|
lineage4.1.2.1
|
co
|
ERR688021
|
Pre-XDR-TB
|
lineage3.1
|
None
|
ERR2179638
|
Pre-XDR-TB
|
lineage4.5
|
cn
|
SRR28351157
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
ERR2864263
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR3132157
|
MDR-TB
|
lineage1.2.1.2.1;lineage4.1.2
|
None
|
ERR11465702
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11466311
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR26112272
|
HR-TB
|
lineage4.7
|
None
|
SRR29273691
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR24710030
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234187
|
HR-TB
|
lineage4.6.2.2
|
gh
|
SAMN03246387
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6326072
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR7517734
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR7645960
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28394010
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR8975063
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR1034878
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034653
|
MDR-TB
|
lineage4.8
|
bg
|
ERR752129
|
HR-TB
|
lineage1.2.1.2.1
|
th
|
ERR2516829
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR11043822
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR4820667
|
MDR-TB
|
lineage1.2.1.2
|
gb
|
ERR1815551
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR11081014
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6511602
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6511632
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393950
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR26937115
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5530522
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR9125377
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR5865634
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865459
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2510283
|
MDR-TB
|
lineage3
|
pk
|
ERR4831434
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR2516632
|
MDR-TB
|
lineage4.8
|
pe
|
ERR2864249
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR19241804
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR11081796
|
HR-TB
|
lineage4.8
|
None
|
SRR29017409
|
MDR-TB
|
lineage1.1.3
|
None
|
ERR12544077
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR2864216
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR998798
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR275186
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1034867
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035032
|
Pre-XDR-TB
|
lineage4.4.1.1
|
za
|
ERR275182
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR126605
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR718386
|
MDR-TB
|
lineage1.1.1
|
th
|
SRR28706433
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR181793
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR4799004
|
MDR-TB
|
lineage1.2.2.2
|
in
|
SRR6152992
|
HR-TB
|
lineage1.2.1.2.1
|
ca
|
ERR10610142
|
HR-TB
|
lineage4.9
|
None
|
ERR3256166
|
HR-TB
|
lineage1.2.1.2.1
|
ph
|
SRR26399693
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR5866349
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7517693
|
HR-TB
|
lineage4.3.4.2
|
ch
|
SRR28239696
|
HR-TB
|
lineage4.8
|
None
|
ERR8975764
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR13194006
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR4830473
|
MDR-TB
|
lineage4.9
|
za
|
ERR718514
|
MDR-TB
|
lineage1.1.1
|
th
|
SRR16156717
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR2864262
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR4831539
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR13290598
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR275185
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3276229
|
MDR-TB
|
lineage1.1.2
|
nl
|
ERR11068660
|
HR-TB
|
lineage4.2.2.1
|
None
|
ERR11069062
|
HR-TB
|
lineage4.8
|
None
|
ERR8975688
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR4798219
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR9907710
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR29093778
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR19276609
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR2600492
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11082296
|
HR-TB
|
lineage4.1.2
|
None
|
SRR6152758
|
HR-TB
|
lineage1.1.1
|
ca
|
SRR21798493
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR1815553
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1035240
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR4799809
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR2864230
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR2864268
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR2864257
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR14164985
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR11662272
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR6511611
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR19241808
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28394304
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR19241809
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1023223
|
MDR-TB
|
lineage5.1.5
|
None
|
ERR1034888
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR5709928
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR8380928
|
MDR-TB
|
lineage1.1.2
|
in
|
SRR29273649
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1035218
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR6866948
|
HR-TB
|
lineage4.3.2
|
None
|
ERR4800101
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR16156808
|
HR-TB
|
lineage2.2.1
|
None
|
ERR688023
|
Pre-XDR-TB
|
lineage3.1
|
None
|
ERR2660453
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR10748132
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR9907776
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR067724
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR275202
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR6153258
|
HR-TB
|
lineage1.2.1.2
|
ca
|
ERR11044642
|
MDR-TB
|
lineage3.1.3
|
None
|
SRR13232455
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4800074
|
MDR-TB
|
lineage1.2.2.2
|
in
|
SRR16156722
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR1034883
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR26800466
|
HR-TB
|
lineage3
|
None
|
ERR2707114
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR11049718
|
HR-TB
|
lineage3
|
None
|
ERR8975615
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR8025632
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR227983
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR1034822
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR10315648
|
MDR-TB
|
lineage4.9
|
None
|
ERR12057444
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR11773825
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1213905
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SRR12882556
|
MDR-TB
|
lineage1.1.3.2
|
None
|
SRR12931790
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR15465775
|
MDR-TB
|
lineage1.1.3.1
|
None
|
SRR16156703
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR16156806
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4831544
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR1034862
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034882
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034868
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR2864226
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR28393259
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR11972329
|
MDR-TB
|
lineage1.1.3.1
|
None
|
ERR13292337
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR13249751
|
Pre-XDR-TB
|
lineage4.5
|
None
|
ERR5987451
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR1035214
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035246
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR3561988
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR16088283
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR046933
|
MDR-TB
|
lineage5.1.3
|
gb
|
ERR1664636
|
XDR-TB
|
lineage4.3.4.2
|
None
|
SRR6511604
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR26399612
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR13290633
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1193819
|
HR-TB
|
lineage4.3.4.2
|
cn
|
ERR736807
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR1664660
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR181933
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR9030348
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR29289188
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
ERR13290631
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9119797
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR2516870
|
MDR-TB
|
lineage1.1.2
|
gb
|
ERR4830778
|
Pre-XDR-TB
|
lineage4.5
|
None
|
ERR4830805
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR13285006
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1036289
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SAMN02567762
|
MDR-TB
|
lineage8
|
None
|
SRR17729363
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR10303299
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2864245
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR2100831
|
HR-TB
|
lineage4.8
|
None
|
SRR3105766
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
SRR29440624
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR5817480
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR29273630
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR403260
|
HR-TB
|
lineage4.8
|
None
|
SRR16156714
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4796496
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
ERR4799095
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR163962
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR4831433
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR11488389
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR13243552
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3273175
|
Pre-XDR-TB
|
lineage1.1.1
|
None
|
ERR13266774
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR13260015
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR275220
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR1013632
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR6152682
|
HR-TB
|
lineage1.2.1.2.1
|
ca
|
ERR4830762
|
Pre-XDR-TB
|
lineage4.5
|
ir
|
ERR4796327
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR13288910
|
HR-TB
|
lineage4.4.1.1
|
None
|
SRR10305614
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1723927
|
Pre-XDR-TB
|
lineage4.5
|
cn
|
ERR4813525
|
HR-TB
|
lineage4.8
|
None
|
ERR1035215
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR11662232
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1173725
|
MDR-TB
|
lineage8
|
None
|
ERR108511
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR4830799
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR4829126
|
MDR-TB
|
lineage1.1.1
|
ng
|
SRR11662433
|
MDR-TB
|
lineage1.1.1.1
|
None
|
ERR5865463
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1034859
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR1165366
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR4423160
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
SRR1166935
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR2099957
|
HR-TB
|
lineage1.1.3.1
|
None
|
SRR7898214
|
HR-TB
|
lineage1.1.2
|
in
|
SRR10040245
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR1035226
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR10828644
|
MDR-TB
|
lineage2.1
|
None
|
SRR1163024
|
MDR-TB
|
lineage1.2.2.1
|
None
|
SRR1167151
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR4829760
|
MDR-TB
|
lineage6.3.1
|
None
|
SRR11662665
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911550
|
MDR-TB
|
lineage4.4.1.1
|
za
|
SRR1162897
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR1664622
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR16088294
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1034814
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR6511603
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28045541
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR9738497
|
MDR-TB
|
lineage4.8
|
None
|
ERR9806656
|
MDR-TB
|
lineage1.2.2.1
|
None
|
SRR15014633
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR718502
|
MDR-TB
|
lineage1.2.2.2
|
th
|
ERR3561979
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR2864267
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR6964601
|
HR-TB
|
lineage3
|
None
|
SRR24466745
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2516874
|
MDR-TB
|
lineage3
|
gb
|
ERR10969161
|
HR-TB
|
lineage2;lineage4.9
|
None
|
ERR2516502
|
MDR-TB
|
lineage4.8
|
pe
|
ERR4796454
|
MDR-TB
|
lineage1.2.2.2
|
in
|
SRR29274729
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911680
|
MDR-TB
|
lineage4.8
|
za
|
ERR12115321
|
MDR-TB
|
lineage8
|
None
|
SRR4423170
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29081000
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR5065430
|
HR-TB
|
lineage1.2.1.2.1
|
vn
|
ERR13288800
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SRR12931689
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR26399838
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR275203
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR4195811
|
HR-TB
|
lineage4.8
|
None
|
ERR1034663
|
MDR-TB
|
lineage4.8
|
bg
|
SRR21576729
|
MDR-TB
|
lineage4.5
|
None
|
SRR11662710
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2101065
|
HR-TB
|
lineage5.1.4
|
None
|
ERR5918026
|
MDR-TB
|
lineage4.8
|
za
|
ERR1034837
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034895
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR12931752
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR275230
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR10305618
|
Pre-XDR-TB
|
lineage4.5
|
None
|
ERR4798761
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR1035222
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR181930
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR1036283
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR1013662
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR10147685
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR10147703
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR12931703
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2515781
|
MDR-TB
|
lineage4.9
|
za
|
ERR275191
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR7764350
|
HR-TB
|
lineage4.3.4.2
|
None
|
DRR130210
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10969115
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR25515018
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13266567
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR16156725
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR28393617
|
MDR-TB
|
lineage4.8
|
None
|
ERR10969199
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR1815555
|
XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29053321
|
HR-TB
|
lineage4.3.2
|
None
|
ERR4423610
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR11067383
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR8975138
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR17234882
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR19276615
|
MDR-TB
|
lineage4
|
None
|
ERR4799359
|
MDR-TB
|
lineage1.2.2.2
|
in
|
SRR15369027
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11081755
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1034847
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR5918035
|
HR-TB
|
lineage4.4.1.1
|
za
|
ERR1035197
|
HR-TB
|
lineage4.3.4.2
|
pt
|
SRR18714762
|
HR-TB
|
lineage4.8
|
None
|
ERR4798681
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR5987292
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR2513293
|
HR-TB
|
lineage1.2.2.2
|
gb
|
ERR1815556
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2864251
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR11488952
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR6361947
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR18911591
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR11044275
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13583316
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR5065498
|
HR-TB
|
lineage1.1.1.1
|
vn
|
SRR12931765
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR16115086
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR12420599
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11138652
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10610231
|
MDR-TB
|
lineage1.2.2.1
|
None
|
ERR9807007
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR6866184
|
HR-TB
|
lineage4.3.2
|
None
|
ERR773802
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR12544104
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR9899701
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393561
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR11662399
|
MDR-TB
|
lineage1.1.1
|
None
|
ERR4830877
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR29772380
|
HR-TB
|
lineage1.1.2
|
None
|
SRR12420576
|
HR-TB
|
lineage2.2.1
|
None
|
SRR14164417
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1034845
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034854
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR25827609
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR1035207
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR12931773
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR5865460
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865859
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2864229
|
MDR-TB
|
lineage4.1.2.1;lineage4.3.4.2
|
pt
|
ERR4800590
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR1034871
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
SAMN02414921
|
MDR-TB
|
lineage1.2.2.1
|
se
|
SRR11662612
|
Pre-XDR-TB
|
lineage1.1.3.3
|
None
|
ERR4819983
|
HR-TB
|
lineage3
|
gb
|
SRR28239691
|
HR-TB
|
lineage4.8
|
None
|
ERR752026
|
HR-TB
|
lineage1.1.1
|
th
|
ERR4830822
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
SRR21732382
|
HR-TB
|
lineage1.1.3
|
None
|
SRR3205962
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16370355
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR8186769
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24799216
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
ERR11773762
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715214
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4798436
|
Pre-XDR-TB
|
lineage1.2.2.2
|
in
|
SRR29273797
|
MDR-TB
|
lineage4.8
|
None
|
ERR1035236
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR2516434
|
MDR-TB
|
lineage4.1.4
|
pe
|
ERR1035208
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035305
|
MDR-TB
|
lineage4.1.2.1
|
br
|
ERR1199071
|
HR-TB
|
lineage4.6.1.1
|
ug
|
ERR6326071
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR9807030
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR5987322
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR4798523
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR2516901
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
ERR1664621
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR12311953
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR6662371
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR11348150
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4797285
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR10430325
|
HR-TB
|
lineage2.2.1
|
None
|
ERR551632
|
HR-TB
|
lineage1.1.3.3
|
de
|
ERR4822366
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1173284
|
MDR-TB
|
lineage8
|
None
|
ERR9119843
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR12931720
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR7911649
|
MDR-TB
|
lineage4.4.1.1
|
za
|
SRR29273979
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4797389
|
MDR-TB
|
lineage1.1.2
|
in
|
SRR24709971
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02414970
|
Pre-XDR-TB
|
lineage4.2.2.2
|
se
|
ERR11466279
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR15369002
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1165495
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516878
|
MDR-TB
|
lineage3
|
gb
|
ERR4195368
|
HR-TB
|
lineage4.8
|
None
|
ERR403236
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29231114
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR18665446
|
HR-TB
|
lineage4.1.1
|
None
|
SRR29056124
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8975787
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SRR12420771
|
HR-TB
|
lineage2.2.1
|
None
|
ERR9121409
|
HR-TB
|
lineage4.8
|
None
|
ERR1034872
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR9806874
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR6511589
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR10828619
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR6832593
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR11044701
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR2984797
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3170474
|
MDR-TB
|
lineage5.1.1
|
gh
|
ERR13059967
|
MDR-TB
|
lineage4.7
|
None
|
SRR6896472
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR29274107
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR12328175
|
MDR-TB
|
lineage1.1.1
|
None
|
ERR245670
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR11081307
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR12931767
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR5486902
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28170729
|
HR-TB
|
lineage4.3.2
|
None
|
SRR29016852
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR11033718
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1049029
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR1034890
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR7911578
|
Pre-XDR-TB
|
lineage4.4.1.1
|
za
|
ERR1035295
|
MDR-TB
|
lineage4.1.2.1
|
br
|
ERR2679287
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR5979540
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1664639
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR12544066
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR29052962
|
HR-TB
|
lineage4.3.2
|
None
|
SRR12142387
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13286162
|
MDR-TB
|
lineage4.8
|
None
|
SRR1163004
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR261082
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR9806872
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR11662288
|
MDR-TB
|
lineage2.1
|
None
|
SRR20969380
|
HR-TB
|
lineage4.4.2
|
None
|
ERR4797296
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR1035294
|
MDR-TB
|
lineage4.1.2.1
|
br
|
SRR5486867
|
MDR-TB
|
lineage4.8
|
None
|
ERR1213904
|
XDR-TB
|
lineage4.1.2.1
|
pe
|
SRR29681347
|
MDR-TB
|
lineage4.8
|
None
|
ERR9899692
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1034870
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034846
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034884
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR9992668
|
XDR-TB
|
lineage4.4.1.1
|
None
|
DRR188743
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035192
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR10969125
|
HR-TB
|
lineage4.9
|
None
|
ERR2516752
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
SRR11662352
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662532
|
MDR-TB
|
lineage1.1.1
|
None
|
SRR5067599
|
HR-TB
|
lineage1.2.1.2.1
|
vn
|
SRR16156754
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR15600368
|
MDR-TB
|
lineage4.8
|
None
|
SRR29094032
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR13249510
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR7755739
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28394020
|
XDR-TB
|
lineage4.1.4
|
None
|
ERR2864276
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1664650
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4819706
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR5341317
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR13289274
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR1034851
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR4797993
|
HR-TB
|
lineage1.2.2.2
|
in
|
ERR4798194
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR4820709
|
MDR-TB
|
lineage1.2.2.2
|
gb
|
ERR4831541
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR1035199
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR6511600
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR1173580
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR1035298
|
MDR-TB
|
lineage4.1.2.1
|
br
|
ERR9120069
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SAMN02414978
|
MDR-TB
|
lineage2.2.1
|
se
|
SRR7131267
|
MDR-TB
|
lineage5.1.4
|
None
|
SRR24709991
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR11662693
|
Pre-XDR-TB
|
lineage1.1.1.1;lineage2.2.1
|
None
|
DRR130164
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1723645
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR1146315
|
MDR-TB
|
lineage1.2.2.1
|
None
|
ERR10680003
|
MDR-TB
|
lineage5.1.5
|
None
|
SRR21659821
|
HR-TB
|
lineage4.3.2
|
None
|
SRR6824528
|
Pre-XDR-TB
|
lineage4.5
|
cn
|
SRR24222943
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR5486884
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2864280
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR2864292
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR13284673
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8975692
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR10525375
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR6511636
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR751867
|
MDR-TB
|
lineage1.1.1
|
th
|
ERR1227528
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR270721
|
HR-TB
|
lineage4.8
|
None
|
ERR8975953
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR11488422
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR1664657
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR439968
|
MDR-TB
|
lineage6.3.1
|
None
|
ERR1034825
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034852
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035005
|
MDR-TB
|
lineage4.4.1.1
|
za
|
ERR7911010
|
MDR-TB
|
lineage4.3.2
|
pe
|
ERR4799883
|
Pre-XDR-TB
|
lineage1.2.2.2
|
in
|
DRR188670
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4796511
|
HR-TB
|
lineage3.1.2
|
in
|
SRR29017588
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR29274029
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR29096363
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR10305616
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR29053374
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR29274093
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR6866741
|
HR-TB
|
lineage4.8
|
None
|
ERR4800279
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR1873459
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR16156739
|
MDR-TB
|
lineage4.4.1.1
|
None
|
DRR130094
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
ERR1035252
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR998796
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR5341252
|
MDR-TB
|
lineage2.2.1.2
|
in
|
ERR1034901
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR16156709
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SAMN02360596
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
SRR24710156
|
HR-TB
|
lineage2.2.1
|
None
|
SRR26800455
|
HR-TB
|
lineage3
|
None
|
ERR4798031
|
MDR-TB
|
lineage1.2.2.2
|
in
|
SRR19241813
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR11488759
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR9124883
|
HR-TB
|
lineage1.1.3.1
|
None
|
ERR5918107
|
MDR-TB
|
lineage4.9
|
za
|
ERR11083138
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR29056016
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29094077
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR22251286
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2446183
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR1227522
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR9806974
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR3639778
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3275336
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
SRR5486866
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1035235
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1664642
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR1664646
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2179639
|
Pre-XDR-TB
|
lineage4.5
|
cn
|
ERR229965
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR12708393
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR6511613
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7764337
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR13291016
|
MDR-TB
|
lineage4.5
|
None
|
ERR1034903
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR4829042
|
Pre-XDR-TB
|
lineage4.1.2.1
|
it
|
ERR1034906
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR25207156
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR1664635
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR1664638
|
XDR-TB
|
lineage4.3.4.2
|
None
|
SRR12931759
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1172073
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
ERR11082881
|
MDR-TB
|
lineage4.5
|
None
|
ERR9899691
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1034891
|
HR-TB
|
lineage4.3.4.2
|
pt
|
SRR25206956
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516791
|
MDR-TB
|
lineage3
|
gb
|
ERR13259558
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797791
|
HR-TB
|
lineage1.1.2
|
in
|
ERR3132152
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4799585
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR1227531
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR5341390
|
HR-TB
|
lineage1.1.2
|
None
|
ERR4012004
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR2516301
|
MDR-TB
|
lineage4.3.4.2
|
be
|
SRR16058504
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR4676886
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR4797828
|
Pre-XDR-TB
|
lineage4.8
|
in
|
SRR30182313
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
DRR188989
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR1035340
|
MDR-TB
|
lineage4.1.2.1
|
br
|
ERR4830972
|
MDR-TB
|
lineage2.2.1
|
np
|
ERR245651
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR1034850
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR21690657
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR1036290
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR1049059
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR6359033
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR16156728
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR28393960
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28394219
|
MDR-TB
|
lineage4.1.1.3;lineage4.1.2.1
|
None
|
SRR28393982
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SAMN02419670
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.3.3
|
by
|
SRR28351257
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR6511615
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28646078
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28044528
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28045119
|
HR-TB
|
La1.3;lineage1.2.2.2
|
None
|
ERR1034589
|
Pre-XDR-TB
|
lineage3.1
|
pk
|
ERR1034591
|
Pre-XDR-TB
|
lineage3.1
|
pk
|
ERR1034608
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR6358950
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR1034905
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR13285104
|
HR-TB
|
lineage4.8
|
None
|
SRR29356641
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR11662460
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29772474
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR29772483
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR9807015
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR1034892
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035251
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR9120121
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR9121476
|
HR-TB
|
lineage4.8
|
None
|
SRR12931803
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR13591357
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR11069120
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1034836
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR4827592
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29273829
|
XDR-TB
|
lineage4.1.2.1
|
None
|
SRR29273673
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR10040481
|
MDR-TB
|
lineage4.5
|
None
|
ERR1034885
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034813
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034874
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR5709905
|
MDR-TB
|
lineage2.2.1
|
th
|
SRR1013631
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR30180476
|
MDR-TB
|
lineage4.5
|
None
|
ERR1034910
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR270662
|
HR-TB
|
lineage1.1.3.1
|
None
|
SRR6484869
|
HR-TB
|
lineage4.8
|
None
|
ERR245836
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR11465527
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR7755766
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9030303
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR736820
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR6511638
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR234215
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035337
|
MDR-TB
|
lineage4.1.2.1
|
br
|
ERR1035238
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR1723646
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797014
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR1034898
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR3732583
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR2197000
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR6511601
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3132268
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR1034896
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR19428621
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR25340894
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR4830830
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
ERR6362905
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR2027214
|
MDR-TB
|
lineage1.1.1
|
None
|
SRR21676513
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR998799
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR1034853
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR6866373
|
HR-TB
|
lineage4.3.2
|
None
|
ERR10969106
|
HR-TB
|
lineage4.9
|
None
|
ERR9992749
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SAMN02231173
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11662562
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13261988
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR13264900
|
HR-TB
|
lineage4.6
|
None
|
SRR671761
|
Pre-XDR-TB
|
lineage2.2.1.1
|
cn
|
SRR6824468
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR14164773
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR21277261
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2864298
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035175
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR3132151
|
XDR-TB
|
lineage4.1.2.1
|
None
|
ERR1035174
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR4829750
|
HR-TB
|
lineage4.6
|
it
|
ERR779679
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR13870409
|
Pre-XDR-TB
|
lineage4.1.4
|
None
|
SRR7781501
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR2864256
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1815557
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR4822361
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR11662509
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR144564
|
HR-TB
|
lineage2.2.1
|
ru
|
ERR4831647
|
MDR-TB
|
lineage1.1.1.1
|
None
|
ERR1035195
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR20969995
|
MDR-TB
|
lineage4.4.2
|
None
|
ERR1035241
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR751956
|
HR-TB
|
lineage1.1
|
th
|
ERR10748096
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR10828835
|
MDR-TB
|
lineage8
|
None
|
SRR16088462
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516780
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR11081481
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR1034908
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR28119709
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035002
|
Pre-XDR-TB
|
lineage4.4.1.1
|
za
|
ERR13259874
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7975652
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665619
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29096523
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR14164587
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR13290600
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR2517569
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR13289386
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR4800700
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11641184
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR1049028
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4819058
|
HR-TB
|
lineage3
|
None
|
ERR4819689
|
MDR-TB
|
lineage1.2.2.2
|
gb
|
SRR25515225
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16058314
|
HR-TB
|
lineage1.1.2
|
None
|
ERR221596
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR4831262
|
XDR-TB
|
lineage2.2.1
|
de
|
SRR21727761
|
HR-TB
|
lineage2.2.1.2
|
None
|
ERR5865633
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2864234
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR20969900
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR2516125
|
MDR-TB
|
lineage4.1.2.1
|
es
|
ERR2516868
|
Pre-XDR-TB
|
lineage4.2.2.2
|
gb
|
SRR21798491
|
HR-TB
|
lineage4.3.4.2;lineage4.8
|
None
|
SRR25827378
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR1035253
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR23938597
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR9738547
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR10969220
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR164021
|
MDR-TB
|
lineage1.2.2.2;lineage4.3.4.2.1
|
mw
|
ERR4797565
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR4830803
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
SRR8237381
|
HR-TB
|
lineage2.2.1
|
ch
|
SRR29273742
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR12311996
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR11591439
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR10040518
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR8186768
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798122
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR275187
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR1873449
|
Pre-XDR-TB
|
lineage4.4.1.1
|
za
|
SRR23861971
|
HR-TB
|
lineage4.8
|
None
|
ERR4799165
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR7361948
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR4676889
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1034817
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR7764428
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR12420733
|
HR-TB
|
lineage2.2.1
|
None
|
ERR163947
|
MDR-TB
|
lineage1.1.2;lineage1.2.2.2
|
mw
|
ERR1035299
|
MDR-TB
|
lineage4.1.2.1
|
br
|
SRR6511642
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR275225
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034860
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR2679306
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR1034830
|
HR-TB
|
lineage4.3.4.2
|
pt
|
SRR9971194
|
MDR-TB
|
lineage4.8
|
None
|
SRR20551052
|
HR-TB
|
La1.7.1
|
None
|
SRR28351204
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
SRR28394038
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28239938
|
HR-TB
|
lineage4.8
|
None
|
SRR29274069
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28394175
|
MDR-TB
|
lineage4.8
|
None
|
SRR1163176
|
MDR-TB
|
lineage1.2.2.1
|
None
|
SRR7517829
|
HR-TB
|
lineage4.1.2.1
|
pe
|
SRR28393655
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28393656
|
MDR-TB
|
lineage4.1.4
|
None
|
SRR29274047
|
HR-TB
|
lineage4.4.1.1
|
None
|
SRR10525368
|
MDR-TB
|
lineage4.8
|
None
|
SRR30182546
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR29772375
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR29289187
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
SRR29772671
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR019857
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2515969
|
MDR-TB
|
lineage4.9
|
za
|
ERR2864281
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR24709923
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13261389
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1034866
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034869
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR4011971
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR552427
|
HR-TB
|
lineage5.1.5
|
None
|
SRR20551051
|
HR-TB
|
La1.7.1
|
None
|
SRR6256965
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23938612
|
HR-TB
|
lineage2.2.1
|
None
|
SRR10828633
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR29440944
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR1063861
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR1815552
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2514631
|
HR-TB
|
lineage4.8
|
gb
|
ERR13284716
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4352123
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR16156758
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR6824462
|
Pre-XDR-TB
|
lineage4.5
|
cn
|
SRR25827479
|
XDR-TB
|
lineage1.2.2.2;lineage2.2.1
|
None
|
ERR13259978
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
ERR1664637
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2864293
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR12931794
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR6964676
|
MDR-TB
|
lineage3;lineage4.9
|
None
|
ERR1036294
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR4828178
|
HR-TB
|
lineage1.1.3
|
vn
|
SRR1173859
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR2864277
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR998797
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR16156749
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR4796710
|
HR-TB
|
lineage3.1.2
|
in
|
ERR11138612
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21276996
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4827521
|
HR-TB
|
lineage4.8
|
None
|
SRR1165591
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR688040
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR1873433
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR1049058
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
DRR034523
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR4553416
|
HR-TB
|
lineage1.1.3.1
|
None
|
ERR1023375
|
HR-TB
|
lineage1.2.1.1
|
None
|
ERR386990
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR4828821
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR7737624
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29050765
|
HR-TB
|
lineage1.1.3
|
None
|
SRR23938586
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2653075
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
DRR130122
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1034829
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR11662370
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28045775
|
HR-TB
|
lineage1.1.3.1
|
None
|
ERR2516990
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
SRR6511643
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR9119845
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR25514915
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11050086
|
HR-TB
|
lineage4
|
None
|
ERR13284650
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR6361949
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR1035196
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1036276
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR275223
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR985421
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR212054
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
SRR16058209
|
HR-TB
|
lineage1.1.3.1
|
None
|
ERR13249496
|
Pre-XDR-TB
|
lineage4.5
|
None
|
DRR034365
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR5073905
|
MDR-TB
|
lineage1.1.1.1
|
vn
|
ERR161085
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR2653187
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR12931706
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR14164357
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR1664640
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR13266395
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR1227532
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR9806875
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2516562
|
MDR-TB
|
lineage1.2.1.2
|
nl
|
ERR1034827
|
HR-TB
|
lineage4.3.4.2
|
pt
|
SRR21689495
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR228051
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR1035361
|
MDR-TB
|
lineage4.1.2.1
|
br
|
ERR1664652
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR5866348
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797869
|
Pre-XDR-TB
|
lineage1.2.2.2
|
in
|
ERR2307628
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516492
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
SRR13180411
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2864273
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR13591396
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR9121356
|
HR-TB
|
lineage4.8
|
None
|
ERR275189
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164778
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR4799524
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR8758877
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR1034632
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR10219873
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR7911634
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.4.1.1
|
za
|
ERR775802
|
HR-TB
|
lineage1.1.1
|
None
|
ERR4830845
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR2516867
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR2101373
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR26936946
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1036274
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR1169046
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
SRR16156744
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR10500317
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
ERR245829
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR1213910
|
MDR-TB
|
lineage1.2.1.2.1
|
ph
|
ERR1034828
|
HR-TB
|
lineage4.3.4.2
|
pt
|
SRR23252677
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR5486895
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2515748
|
MDR-TB
|
lineage4.8
|
za
|
SRR1723647
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9120068
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR28393962
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR24828607
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2864241
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR3838815
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2653217
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR11083054
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2864287
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR6052022
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR12931758
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR4195499
|
HR-TB
|
lineage4.8
|
None
|
ERR6362545
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR1035333
|
Pre-XDR-TB
|
lineage4.1.2.1
|
br
|
ERR2653115
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1664662
|
XDR-TB
|
lineage4.3.4.2
|
None
|
SRR12420385
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3639758
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12931714
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR12931753
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR275200
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR5866347
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14164962
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR4828866
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR1036296
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR10465867
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR21277582
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710270
|
HR-TB
|
lineage2.2.1
|
None
|
ERR12790851
|
MDR-TB
|
lineage1.1.1.1
|
None
|
SRR28393961
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR13252747
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR275199
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR13289416
|
HR-TB
|
lineage2.2.1
|
None
|
ERR775795
|
MDR-TB
|
lineage1.1.3.3
|
th
|
SRR29772626
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR13260938
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
ERR13284105
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29126595
|
HR-TB
|
lineage4.9
|
None
|
SRR16156735
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR5153826
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6257059
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR6785477
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13291063
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1664656
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4796760
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR7737654
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1163374
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
ERR017783
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1034889
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035300
|
HR-TB
|
lineage4.1.2.1
|
br
|
ERR275206
|
MDR-TB
|
lineage4.3.4.2
|
pt
|