lineage | Count |
---|---|
La1.8.1 | 5 |
lineage2.2.1 | 16 |
lineage3 | 14 |
lineage4.3.3 | 2 |
lineage4.1.2.1 | 11 |
lineage4.3.4.2.1 | 1 |
lineage4.8 | 6 |
lineage3.1.1 | 2 |
lineage4.2.2.2 | 3 |
lineage4.1 | 1 |
lineage4.2.2.1 | 1 |
lineage2.2.1.1 | 2 |
lineage4.3 | 2 |
lineage4;lineage1.2.2.1 | 1 |
lineage4.5 | 2 |
lineage1.1.3.1 | 4 |
lineage4.4.1.1 | 3 |
lineage4.6.2.2 | 2 |
lineage1.1.2 | 2 |
lineage4.7 | 1 |
lineage4.1.1.3 | 1 |
lineage3.1.3 | 1 |
lineage4.4 | 1 |
lineage3.1.2 | 1 |
lineage3.1.2.1 | 1 |
lineage4.8.1 | 1 |
lineage4.2.1 | 3 |
lineage4.9 | 1 |
lineage3.1.2.2 | 1 |
lineage4.6.5 | 1 |
La1.8.2 | 4 |
1 | |
lineage4 | 1 |
lineage4.1.2 | 2 |
lineage4.3.4.1 | 1 |
lineage4.1.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 105 |
ID | Drug resistance | Lineage | Country iso2 | SRR1791820 | Other | La1.8.1 | None | SRR1791851 | Other | La1.8.1 | None | SRR1792310 | Other | La1.8.1 | None | SRR18714910 | MDR-TB | lineage2.2.1 | None | SRR19303775 | Other | lineage3 | None | SRR18714923 | Sensitive | lineage2.2.1 | None | SRR18714876 | MDR-TB | lineage2.2.1 | None | SRR18715231 | Sensitive | lineage4.3.3 | None | ERR11050876 | Sensitive | lineage4.1.2.1 | None | ERR11050844 | Sensitive | lineage4.1.2.1 | None | SRR2101409 | Sensitive | lineage4.3.4.2.1 | None | ERR11050849 | HR-TB | lineage4.8 | None | ERR11050865 | Sensitive | lineage3.1.1 | None | ERR11068247 | Sensitive | lineage4.2.2.2 | None | ERR11050899 | Sensitive | lineage3.1.1 | None | ERR11068620 | MDR-TB | lineage4.1 | None | ERR11068445 | MDR-TB | lineage2.2.1 | None | ERR11068719 | Sensitive | lineage4.1.2.1 | None | ERR11068625 | MDR-TB | lineage2.2.1 | None | ERR11068821 | Sensitive | lineage2.2.1 | None | ERR11068771 | Sensitive | lineage4.1.2.1 | None | ERR11068795 | Sensitive | lineage4.2.2.1 | None | ERR11068726 | Sensitive | lineage2.2.1.1 | None | ERR11068551 | Sensitive | lineage4.3 | None | SRR6650303 | Other | lineage2.2.1 | None | SRR6650394 | Sensitive | lineage3 | None | SRR6650390 | Sensitive | lineage4;lineage1.2.2.1 | None | SRR6650379 | Sensitive | lineage4.5 | None | SRR6650361 | Sensitive | lineage3 | None | SRR6650103 | Other | lineage1.1.3.1 | None | SRR6650283 | Sensitive | lineage3 | None | SRR6650391 | Sensitive | lineage1.1.3.1 | None | SRR6650404 | Sensitive | lineage2.2.1 | None | ERR11050974 | Sensitive | lineage4.4.1.1 | None | SRR6650299 | Other | lineage1.1.3.1 | None | SRR6650227 | Sensitive | lineage1.1.3.1 | None | ERR4816233 | RR-TB | lineage4.1.2.1 | gb | ERR1679656 | MDR-TB | lineage4.6.2.2 | ng | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4815885 | Sensitive | lineage3 | gb | ERR2229773 | Sensitive | lineage4.8 | None | ERR4816347 | Sensitive | lineage3 | gb | ERR4817285 | Sensitive | lineage3 | gb | ERR2513240 | MDR-TB | lineage2.2.1 | gb | ERR4816899 | Sensitive | lineage3 | None | ERR2512535 | Sensitive | lineage4.7 | gb | ERR3148159 | MDR-TB | lineage4.1.1.3 | mx | ERR2513569 | Sensitive | lineage3 | gb | ERR4818598 | Sensitive | lineage2.2.1.1 | gb | ERR11067160 | Other | lineage3.1.3 | None | ERR2514048 | Sensitive | lineage4.4 | gb | SRR5074294 | Sensitive | lineage4.4.1.1 | None | ERR2514170 | Sensitive | lineage3.1.2 | gb | SRR5657424 | Other | La1.8.1 | None | ERR2514404 | Other | lineage3.1.2.1 | gb | SRR6045523 | MDR-TB | lineage3 | gb | ERR2514668 | Other | lineage4.8.1 | gb | ERR4819991 | Sensitive | lineage3 | gb | ERR4820598 | Sensitive | lineage2.2.1 | gb | SRR20139566 | RR-TB | lineage4.1.2.1 | None | SRR23310987 | MDR-TB | lineage4.2.1 | None | SRR6045181 | Sensitive | lineage2.2.1 | gb | SRR6045640 | Sensitive | lineage4.9 | gb | ERR4822222 | Other | lineage3.1.2.2 | None | ERR11049778 | Sensitive | lineage4.8 | None | SRR6046329 | Sensitive | lineage1.1.2 | gb | SRR6046775 | Sensitive | lineage3 | gb | ERR1413470 | Sensitive | lineage4.6.2.2 | gb | SRR8073658 | Other | La1.8.1 | None | ERR11049048 | Other | lineage4.6.5 | None | ERR10796622 | Other | lineage4.8 | None | ERR6139642 | Other | La1.8.2 | None | ERR4797095 | MDR-TB | in | ERR9117765 | HR-TB | lineage4.2.1 | None | ERR6140668 | Other | La1.8.2 | None | ERR6140816 | Other | La1.8.2 | None | ERR11049974 | Sensitive | lineage4.2.2.2 | None | ERR11049983 | Sensitive | lineage3 | None | ERR11050022 | Sensitive | lineage4.3 | None | ERR6140815 | Other | La1.8.2 | None | ERR9117822 | Sensitive | lineage4.1.2.1 | None | SRR10272559 | Sensitive | lineage4.4.1.1 | None | ERR11050070 | Sensitive | lineage4.8 | None | ERR11050098 | Sensitive | lineage4 | None | ERR11050174 | Sensitive | lineage4.1.2 | None | ERR9901026 | Sensitive | lineage4.3.4.1 | None | ERR11050191 | HR-TB | lineage4.1.2.1 | None | ERR11050230 | Sensitive | lineage4.1.1 | None | SRR1191489 | Other | lineage4.1.2 | ca | SRR12634619 | Sensitive | lineage4.6.1.1 | None | SRR12634534 | Sensitive | lineage4.2.2.2 | None | SRR14781987 | Sensitive | lineage4.1.2.1 | None | ERR11050495 | Sensitive | lineage3 | None | SRR13870401 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR14782437 | Sensitive | lineage2.2.1 | None | SRR14782403 | Sensitive | lineage2.2.1 | None | SRR14782499 | Sensitive | lineage4.8 | None | SRR14782692 | Other | lineage4.2.1.1 | None | SRR16088224 | Sensitive | lineage2.2.1 | None | SRR14782686 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050662 | Sensitive | lineage4.5 | None | SRR16088101 | Sensitive | lineage4.1.2.1 | None | SRR14782714 | HR-TB | lineage2.2.1 | None | SRR14801470 | Sensitive | lineage4.2.1 | None | ERR11050680 | Sensitive | lineage4.3.3 | None |
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