lineage | Count |
---|---|
lineage3 | 15 |
lineage4.3.3 | 6 |
lineage1.1.1.1 | 2 |
lineage4.6.1.2 | 1 |
lineage2.2.1 | 31 |
lineage4.8 | 4 |
La1.2.BCG | 2 |
lineage2.2.1.1;lineage3 | 1 |
lineage4.4.2 | 3 |
lineage4.3.4.1 | 1 |
lineage4.5 | 5 |
lineage1.2.2.2 | 5 |
lineage4.1.1.3 | 3 |
lineage2.2.1.1 | 5 |
lineage3.1 | 1 |
lineage1.2.1.2 | 1 |
lineage4.2.2 | 1 |
lineage4.1 | 1 |
lineage4.2.1.1 | 2 |
lineage1.2.1.2.1 | 11 |
lineage4.1.2 | 1 |
lineage1.1.2 | 4 |
lineage4.1.1 | 2 |
lineage4.3.1 | 2 |
lineage2.2.2 | 3 |
lineage4.1.1.1 | 1 |
lineage2.1 | 1 |
lineage3.1.2.1 | 4 |
lineage4.2.2.2 | 2 |
lineage1.1.1 | 3 |
lineage4.9 | 1 |
lineage4.1.2.1 | 2 |
lineage4.4.1.2 | 1 |
lineage4.4.1.1 | 1 |
lineage4.6.1.1 | 1 |
lineage3.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
La2 | 1 |
spoligotype | Count |
---|---|
None | 133 |
ID | Drug resistance | Lineage | Country iso2 | SRR27449981 | Sensitive | lineage3 | None | SRR28868831 | Sensitive | lineage4.3.3 | None | SRR28868559 | Other | lineage1.1.1.1 | None | SRR28860065 | Sensitive | lineage3 | None | SRR21733139 | Sensitive | lineage4.6.1.2 | None | SRR28868552 | Sensitive | lineage2.2.1 | None | SRR28868742 | Sensitive | lineage3 | None | SRR28868833 | Sensitive | lineage2.2.1 | None | SRR27450545 | Sensitive | lineage3 | None | SRR27450584 | Sensitive | lineage4.8 | None | SRR24256191 | MDR-TB | lineage2.2.1 | None | SRR28858729 | HR-TB | La1.2.BCG | None | SRR28868740 | Sensitive | lineage3 | None | SRR28868684 | Sensitive | lineage2.2.1 | None | DRR473888 | Other | lineage2.2.1 | None | SRR21733267 | HR-TB | lineage2.2.1 | None | SRR28860067 | Sensitive | lineage4.8 | None | SRR25827635 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR27450420 | Sensitive | lineage4.4.2 | None | SRR26397814 | XDR-TB | lineage4.3.4.1 | None | SRR27450428 | Sensitive | lineage4.5 | None | SRR26558639 | Sensitive | lineage1.2.2.2 | None | SRR28859982 | Sensitive | lineage4.8 | None | SRR28868360 | Sensitive | lineage4.1.1.3 | None | SRR28860001 | Sensitive | lineage1.2.2.2 | None | SRR28868462 | Sensitive | lineage3 | None | SRR27450530 | Sensitive | lineage2.2.1.1 | None | SRR21733162 | Other | lineage3.1 | None | SRR28868855 | Sensitive | lineage2.2.1 | None | SRR28858365 | Sensitive | lineage1.2.1.2 | None | SRR27450335 | Sensitive | lineage2.2.1 | None | SRR27450372 | HR-TB | lineage4.2.2 | None | SRR21732752 | Other | lineage3 | None | SRR27450369 | Other | lineage2.2.1 | None | SRR28868832 | Sensitive | lineage4.1 | None | SRR16088204 | Sensitive | lineage4.2.1.1 | None | SRR27449983 | Sensitive | lineage3 | None | SRR27449990 | Sensitive | lineage3 | None | SRR28860190 | Sensitive | lineage1.2.1.2.1 | None | SRR21732819 | Pre-XDR-TB | lineage2.2.1 | None | SRR28434991 | MDR-TB | lineage2.2.1 | None | SRR21733344 | Sensitive | lineage2.2.1 | None | SRR27450594 | Sensitive | lineage4.1.2 | None | SRR27450133 | Sensitive | lineage1.1.2 | None | SRR28868630 | Sensitive | lineage2.2.1 | None | SRR27450605 | HR-TB | La1.2.BCG | None | SRR28868622 | Sensitive | lineage4.1.1.3 | None | SRR29017060 | XDR-TB | lineage1.2.2.2 | None | SRR28859851 | Sensitive | lineage1.2.2.2 | None | SRR28860191 | Sensitive | lineage4.1.1 | None | SRR27450597 | Sensitive | lineage4.3.1 | None | SRR28868848 | Sensitive | lineage2.2.1 | None | SRR21733352 | Sensitive | lineage4.1.1.3 | None | SRR28119839 | MDR-TB | lineage2.2.2 | None | SRR28868610 | Other | lineage1.2.1.2.1 | None | SRR28868646 | Sensitive | lineage4.5 | None | SRR26112565 | Sensitive | lineage4.1.1.1 | None | SRR28868845 | Sensitive | lineage2.1 | None | SRR27450290 | HR-TB | lineage1.2.1.2.1 | None | SRR28859997 | Sensitive | lineage4.8 | None | SRR28868596 | Sensitive | lineage1.2.1.2.1 | None | SRR16088105 | Sensitive | lineage4.3.3 | None | SRR21733350 | Sensitive | lineage3.1.2.1 | None | SRR27450557 | Sensitive | lineage3 | None | SRR26111941 | Sensitive | lineage4.2.2.2 | None | SRR28868623 | Sensitive | lineage2.2.1 | None | SRR29016851 | Pre-XDR-TB | lineage2.2.1 | None | SRR27450576 | Sensitive | lineage1.1.1 | None | SRR27450531 | Sensitive | lineage1.2.1.2.1 | None | SRR28868734 | Sensitive | lineage3 | None | SRR21732561 | Sensitive | lineage1.2.1.2.1 | None | SRR28860101 | Sensitive | lineage4.3.3 | None | SRR27450341 | Pre-XDR-TB | lineage2.2.1 | None | SRR27450367 | Sensitive | lineage1.2.1.2.1 | None | SRR16088114 | Sensitive | lineage4.3.3 | None | SRR28858416 | Sensitive | lineage3 | None | SRR26397816 | Other | lineage4.9 | None | SRR28860091 | Sensitive | lineage4.1.2.1 | None | SRR28868767 | Sensitive | lineage3.1.2.1 | None | SRR28859993 | Sensitive | lineage4.3.1 | None | SRR28868648 | Sensitive | lineage3 | None | SRR28860207 | MDR-TB | lineage2.2.1 | None | SRR28868560 | Sensitive | lineage3.1.2.1 | None | SRR28860112 | Sensitive | lineage2.2.1 | None | SRR28868852 | Sensitive | lineage2.2.1.1 | None | SRR28859922 | Sensitive | lineage4.3.3 | None | SRR28868651 | Sensitive | lineage4.3.3 | None | DRR473947 | Sensitive | lineage4.5 | None | SRR21733347 | Sensitive | lineage1.1.1.1 | None | SRR24256362 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868464 | HR-TB | lineage2.2.1 | None | SRR28868494 | Other | lineage2.2.1 | None | SRR27450549 | Sensitive | lineage4.2.2.2 | None | SRR27449995 | Sensitive | lineage1.2.1.2.1 | None | SRR26558638 | MDR-TB | lineage2.2.1 | None | SRR28868647 | Sensitive | lineage2.2.1.1 | None | SRR26112370 | Sensitive | lineage4.1.2.1 | None | SRR21733211 | Sensitive | lineage2.2.1.1 | None | SRR27450187 | Other | lineage2.2.1 | None | SRR21732750 | Sensitive | lineage1.1.2 | None | SRR27450287 | Other | lineage1.2.1.2.1 | None | SRR28868614 | HR-TB | lineage4.4.1.2 | None | SRR28859987 | MDR-TB | lineage2.2.1 | None | SRR28860188 | Sensitive | lineage4.1.1 | None | SRR28868527 | Sensitive | lineage4.4.2 | None | SRR28868516 | Sensitive | lineage1.2.2.2 | None | SRR21733215 | Sensitive | lineage3.1.2.1 | None | SRR28868603 | Sensitive | lineage4.4.1.1 | None | SRR28868743 | Sensitive | lineage2.2.1.1 | None | SRR28868768 | Sensitive | lineage4.6.1.1 | None | SRR28868844 | Sensitive | lineage3.1.2 | None | SRR27450149 | HR-TB | lineage2.2.1 | None | SRR27449982 | Sensitive | lineage4.2.1.1 | None | SRR28868344 | Sensitive | lineage1.1.1 | None | SRR28868459 | Sensitive | lineage4.4.2 | None | SRR28859647 | Sensitive | lineage3 | None | SRR28860056 | HR-TB | lineage4.5 | None | SRR28868617 | Sensitive | lineage4.5 | None | SRR28868672 | Other | lineage3 | None | SRR21733157 | Sensitive | lineage1.1.2 | None | SRR27450546 | Sensitive | lineage1.1.2 | None | DRR473917 | Sensitive | lineage2.2.2 | None | SRR21733356 | Sensitive | lineage4.3.4.2.1 | None | SRR27450288 | Sensitive | lineage1.1.1 | None | DRR473895 | Sensitive | lineage2.2.1 | None | SRR21733345 | Sensitive | lineage1.2.1.2.1 | None | SRR21733128 | Other | lineage2.2.1 | None | SRR28859992 | Sensitive | lineage2.2.2 | None | SRR27450286 | Sensitive | lineage2.2.1 | None | SRR16088122 | Sensitive | La2 | None | SRR21733272 | Sensitive | lineage2.2.1 | None | SRR21732953 | Sensitive | lineage2.2.1 | None | SRR27449993 | Sensitive | lineage1.2.1.2.1 | None |
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