lineage | Count |
---|---|
lineage3 | 7 |
lineage2.2.1 | 21 |
lineage4 | 3 |
lineage4.7 | 5 |
lineage4.9 | 1 |
lineage4.3 | 1 |
lineage4.3.4.2.1 | 1 |
La1.8.1 | 3 |
lineage1.2.1.2.1 | 6 |
lineage4.8 | 10 |
lineage4.3.2 | 2 |
lineage4.3.3 | 4 |
lineage4.1.2.1 | 11 |
lineage4.3.4.1 | 3 |
lineage2.2.2 | 1 |
lineage4.2.1 | 1 |
La2 | 5 |
La1.8.2 | 2 |
lineage4.5 | 1 |
lineage4.6.2.2 | 2 |
lineage4.4.2 | 3 |
La1.7.1 | 1 |
lineage1.2.2.2 | 2 |
lineage4.1.2 | 1 |
lineage1.2.1.2 | 1 |
La1.2 | 1 |
lineage2.2.1.1 | 1 |
lineage3.1.2 | 1 |
lineage4.4.1.2 | 1 |
lineage1.1.1.1 | 2 |
lineage1.1.1 | 2 |
lineage2.1 | 1 |
lineage4.1.1 | 1 |
lineage4.1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 109 |
ID | Drug resistance | Lineage | Country iso2 | SRR5341262 | Sensitive | lineage3 | None | SRR6257104 | MDR-TB | lineage2.2.1 | None | SRR6044936 | Other | lineage4 | None | ERR4828801 | HR-TB | lineage4.7 | None | SRR6187071 | HR-TB | lineage4.7 | None | SRR9940990 | Sensitive | lineage4.9 | None | ERR4972550 | MDR-TB | lineage4.3 | None | SRR6896386 | HR-TB | lineage4.3.4.2.1 | None | SRR8600262 | Other | La1.8.1 | None | DRR034522 | Sensitive | lineage1.2.1.2.1 | None | SRR8600266 | Other | La1.8.1 | None | ERR9117680 | Sensitive | lineage3 | None | SRR26112046 | Sensitive | lineage4.8 | None | SRR26112076 | Sensitive | lineage4.8 | None | SRR26112139 | Sensitive | lineage4.3.2 | None | ERR8773490 | Sensitive | lineage4.3.3 | None | SRR18914176 | Sensitive | lineage4.1.2.1 | None | SRR18914177 | Sensitive | lineage4.3.4.1 | None | DRR034532 | HR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR023730 | Sensitive | lineage4.1.2.1 | None | ERR024336 | Sensitive | lineage4.3.2 | None | SRR26112392 | Sensitive | lineage2.2.1 | None | ERR8773492 | Sensitive | lineage4.3.3 | None | ERR9117765 | HR-TB | lineage4.2.1 | None | ERR9891991 | Other | lineage4.3.3 | None | SRR11972411 | MDR-TB | lineage2.2.1 | None | ERR9899698 | Other | lineage3 | None | SRR13888790 | Sensitive | La2 | None | SRR13888796 | Sensitive | La2 | None | SRR15296919 | Other | La1.8.2 | None | SRR15296916 | Other | La1.8.2 | None | SRR21798506 | HR-TB | lineage4.1.2.1 | None | SRR16097539 | HR-TB | lineage4.5 | None | SRR16100246 | Sensitive | lineage4.6.2.2 | None | SRR16115074 | Sensitive | lineage4.4.2 | None | SRR1791804 | Other | La1.7.1 | None | SRR26112660 | Sensitive | lineage2.2.1 | None | SRR16115019 | Sensitive | lineage4 | None | SRR26112634 | Sensitive | lineage4.1.2.1 | None | SRR18910196 | Sensitive | lineage4 | None | SRR19320502 | Sensitive | lineage4.6.2.2 | None | SRR18911564 | Sensitive | lineage4.4.2 | None | SRR25395599 | Sensitive | lineage4.3.3 | None | SRR19320509 | Sensitive | lineage4.1.2.1 | None | SRR24799251 | Sensitive | lineage1.2.2.2 | None | SRR24827285 | Sensitive | La2 | None | SRR24827306 | Other | lineage3 | None | SRR21675938 | Sensitive | lineage4.8 | None | SRR2101583 | Sensitive | lineage4.1.2.1 | None | SRR21658562 | Sensitive | lineage4.1.2 | None | SRR21661633 | Sensitive | lineage1.2.1.2.1 | None | SRR21675694 | Sensitive | lineage1.2.1.2 | None | SRR21798467 | HR-TB | lineage4.7 | None | SRR18914030 | Sensitive | lineage2.2.1 | None | SRR21798437 | Sensitive | lineage4.7 | None | SRR21678360 | Sensitive | lineage4.4.2 | None | SRR6650361 | Sensitive | lineage3 | None | SRR26399740 | Sensitive | lineage2.2.1 | None | SRR24223041 | Sensitive | lineage1.2.1.2.1 | None | SRR26046697 | MDR-TB | lineage2.2.1 | None | SRR25167911 | Other | La1.2 | None | SRR25395653 | MDR-TB | lineage2.2.1 | None | SRR26399468 | HR-TB | lineage2.2.1 | None | SRR25395636 | Sensitive | lineage4.8 | None | SRR25167924 | Sensitive | La2 | None | SRR26397810 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR26399730 | Sensitive | lineage2.2.1 | None | SRR26112366 | Sensitive | lineage2.2.1.1 | None | SRR26112059 | Sensitive | lineage4.1.2.1 | None | SRR26112272 | HR-TB | lineage4.7 | None | SRR26112074 | Sensitive | lineage2.2.1 | None | SRR26112252 | Sensitive | lineage3.1.2 | None | SRR26112642 | Sensitive | lineage2.2.1 | None | SRR26112637 | Sensitive | lineage1.2.1.2.1 | None | SRR26112653 | Sensitive | lineage2.2.1 | None | SRR26112692 | HR-TB | lineage1.2.1.2.1 | None | SRR26112668 | Sensitive | lineage1.2.1.2.1 | None | SRR26112662 | Sensitive | lineage4.1.2.1 | None | SRR26112830 | Sensitive | lineage4.4.1.2 | None | SRR24799258 | Other | lineage1.2.2.2 | None | SRR24799230 | Sensitive | lineage2.2.1 | None | SRR25395593 | MDR-TB | lineage2.2.1 | None | SRR24799238 | RR-TB | lineage2.2.1 | None | SRR24827289 | Other | lineage4.3.4.1 | None | SRR24827299 | Other | lineage4.8 | None | SRR24799246 | Sensitive | lineage4.8 | None | SRR25167925 | Sensitive | La2 | None | SRR25167945 | Other | La1.8.1 | None | SRR26399481 | Sensitive | lineage1.1.1.1 | None | SRR26399356 | Sensitive | lineage2.2.1 | None | SRR26399302 | Sensitive | lineage1.1.1 | None | SRR26399558 | HR-TB | lineage2.2.1 | None | SRR26399547 | Sensitive | lineage1.1.1.1 | None | SRR28170829 | Sensitive | lineage2.2.1 | None | SRR26399738 | HR-TB | lineage2.1 | None | SRR28170848 | Sensitive | lineage4.8 | None | SRR24222921 | Sensitive | lineage2.2.1 | None | ERR4814667 | Sensitive | lineage3 | None | ERR2196998 | Sensitive | lineage1.1.1 | None | ERR4814694 | Sensitive | lineage4.1.2.1 | None | ERR4817377 | Sensitive | lineage3 | None | ERR2229504 | Sensitive | lineage4.8 | None | ERR2229486 | Other | lineage4.8 | None | ERR4817683 | Sensitive | lineage4.1.1 | None | SRR5065701 | HR-TB | lineage4.1.2.1 | vn | ERR2513628 | Other | lineage4.1.2.1 | None | ERR2513929 | Other | lineage4.1.1.2 | None | ERR2513924 | RR-TB | lineage4.8 | None |
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