Rv1854c - c.-183A>C
Drug resistance types
143 Sensitive
10 RR-TB
27 HR-TB
20 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 4 |
| lineage1.1.1 | 2 |
| lineage4.5 | 2 |
| lineage1.2.2.2 | 10 |
| lineage4.8.2 | 1 |
| lineage2.2.1 | 37 |
| lineage4.8 | 11 |
| lineage2.2.1.1 | 7 |
| lineage4.3.4.2 | 6 |
| lineage4.1.2.1 | 17 |
| lineage4.3.4.1 | 4 |
| lineage3 | 32 |
| La1.6 | 1 |
| La1.7.1 | 4 |
| La1.8.1 | 11 |
| lineage4.1.2 | 4 |
| lineage4 | 5 |
| lineage1.1.2 | 3 |
| La3 | 1 |
| La1.3 | 1 |
| 4 | |
| lineage4.3.2 | 1 |
| lineage4.1.1.3 | 14 |
| lineage1.1.1.1 | 2 |
| lineage4.3.4.2.1 | 9 |
| lineage4.3.2.1 | 5 |
| lineage4.1.1 | 4 |
| lineage2.2 | 1 |
| lineage1.2.1.2.1 | 6 |
| lineage4.7 | 1 |
| lineage4.6.4 | 1 |
| lineage1.1.3.1 | 10 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.3 | 2 |
| lineage4.4.1.1 | 7 |
| lineage3.1.2 | 3 |
| lineage4.6.2.2 | 1 |
| lineage4.1.4 | 1 |
| lineage4.9 | 10 |
| lineage3.1.2.2 | 1 |
| lineage3.1.1 | 4 |
| lineage4.2.2.2 | 1 |
| lineage4.6.1 | 1 |
| lineage3.1.3 | 2 |
| lineage4.1.1.3.1 | 4 |
| La1.8.2 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.6 | 2 |
| lineage3.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1.2 | 1 |
| La1.2 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.4.1.2;lineage2.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La2 | 2 |
| lineage4.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 281 |
Geographic prevalence
Country level data for this variant is available for 55 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117681 | Other | lineage4.3.3 | None | ERR9786014 | Sensitive | lineage1.1.1 | None | ERR9117750 | HR-TB | lineage4.5 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR983234 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786106 | Sensitive | lineage4.8 | None | ERR983233 | MDR-TB | lineage2.2.1.1 | None | ERR9786133 | Sensitive | lineage4.3.4.2 | None | ERR9786140 | Sensitive | lineage4.1.2.1 | None | ERR9786196 | Sensitive | lineage4.3.4.1 | None | ERR9891970 | Other | lineage3 | None | ERR9901026 | Sensitive | lineage4.3.4.1 | None | SRR11871416 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993945 | Other | La1.6 | None | SRR11418330 | Other | La1.7.1 | None | SRR11462930 | Other | La1.8.1 | None | SRR11871417 | MDR-TB | lineage2.2.1 | None | SRR11972272 | RR-TB | lineage2.2.1.1 | None | SRR1187629 | Sensitive | lineage4.1.2 | ca | SRR11972194 | HR-TB | lineage2.2.1.1 | None | SRR11972454 | MDR-TB | lineage4 | None | SRR11972415 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972435 | Sensitive | lineage1.1.1 | None | SRR11972383 | Sensitive | lineage1.1.2 | None | SRR14296411 | Other | La1.8.1 | None | SRR13986566 | Other | La1.7.1 | None | SRR14001962 | Other | La1.7.1 | None | SRR16099289 | HR-TB | lineage1.2.2.2 | None | SRR16370327 | Other | lineage1.2.2.2 | None | SRR1791792 | Other | La1.8.1 | None | SRR1735569 | HR-TB | La3 | None | SRR1640327 | Sensitive | lineage4.1.2 | ca | SRR1791711 | Other | La1.3 | None | SRR1791870 | Other | La1.7.1 | None | SRR1791910 | Other | None | SRR1792003 | Other | La1.8.1 | None | SRR18911120 | HR-TB | None | SRR19325559 | Sensitive | lineage4.3.2 | None | SRR18914183 | Sensitive | lineage4.1.1.3 | None | SRR18914228 | Sensitive | lineage1.1.1.1 | None | SRR20139551 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR20139561 | RR-TB | lineage4.1.2.1 | None | SRR20139562 | RR-TB | lineage4.8 | None | SRR20139553 | MDR-TB | lineage4.8 | None | SRR2101422 | Sensitive | lineage3 | None | SRR2101419 | Sensitive | lineage4.3.4.2.1 | None | SRR2101525 | RR-TB | lineage4.1.1.3 | None | SRR2101472 | Sensitive | lineage4.3.2.1 | None | SRR2101548 | Sensitive | lineage2.2.1 | None | SRR21675634 | Sensitive | lineage4.1.1 | None | SRR2101565 | Sensitive | lineage4.1.1.3 | None | SRR21662023 | Sensitive | lineage2.2.1 | None | SRR21657651 | Sensitive | lineage4.3.4.2 | None | SRR21662812 | Sensitive | lineage2.2.1 | None | SRR21676526 | Other | lineage4.1.1.3 | None | SRR21676936 | Sensitive | lineage2.2 | None | SRR21676925 | Sensitive | lineage4.8 | None | SRR21685364 | HR-TB | lineage1.2.1.2.1 | None | SRR21676947 | Other | lineage2.2.1 | None | SRR21727736 | Sensitive | lineage2.2.1.1 | None | SRR21710919 | Sensitive | lineage3 | None | SRR21714031 | Sensitive | lineage4.1.2.1 | None | SRR21722110 | Sensitive | lineage4.7 | None | ERR551848 | Other | lineage4.6.4 | None | SRR23174164 | Other | La1.8.1 | None | SRR23174297 | Other | La1.8.1 | None | SRR21735254 | Sensitive | lineage4.1.2.1 | None | SRR23174299 | Other | La1.8.1 | None | SRR6650119 | Sensitive | lineage1.1.3.1 | None | ERR553032 | Sensitive | lineage4.3.4.2 | None | SRR8662667 | Pre-XDR-TB | lineage2.2.1 | None | SRR6650135 | Sensitive | lineage1.1.3.1 | None | SRR6650303 | Other | lineage2.2.1 | None | SRR6650350 | Other | lineage3 | None | SRR6207277 | MDR-TB | lineage2.2.1 | None | SRR6650168 | Sensitive | lineage4.3.4.2 | None | SRR6650220 | Other | lineage3 | None | SRR6650385 | Other | lineage1.2.2.2 | None | SRR6650379 | Sensitive | lineage4.5 | None | SRR6650394 | Sensitive | lineage3 | None | SRR6650390 | Sensitive | lineage4;lineage1.2.2.1 | None | SRR6650319 | Sensitive | lineage1.1.3.1 | None | SRR6650428 | Sensitive | lineage1.2.2.2 | None | SRR6650111 | Sensitive | lineage1.2.2.2 | None | SRR6650285 | Sensitive | lineage4.8 | None | SRR6650345 | Other | lineage1.1.3.1 | None | SRR6650323 | Other | lineage1.2.2.2 | None | SRR6797635 | Other | lineage2.2.1 | None | SRR6650127 | Sensitive | None | SRR6650117 | Sensitive | lineage4.4.1.2 | None | SRR6650283 | Sensitive | lineage3 | None | SRR6650149 | HR-TB | lineage4.8 | None | SRR6650391 | Sensitive | lineage1.1.3.1 | None | SRR6650368 | Sensitive | lineage1.2.2.2 | None | SRR6650161 | Other | lineage1.1.3 | None | SRR6650404 | Sensitive | lineage2.2.1 | None | SRR6650103 | Other | lineage1.1.3.1 | None | SRR6650185 | HR-TB | lineage1.1.3.1 | None | SRR6650106 | Other | lineage3 | None | SRR6650230 | MDR-TB | lineage2.2.1 | None | SRR6650210 | Sensitive | lineage1.1.3.1 | None | SRR6650193 | Sensitive | lineage3 | None | SRR6650321 | Sensitive | lineage1.2.2.2 | None | SRR6650302 | Sensitive | lineage3 | None | SRR6650399 | Sensitive | lineage4.1.2.1 | None | SRR6650299 | Other | lineage1.1.3.1 | None | ERR552765 | MDR-TB | lineage4.4.1.1 | sz | SRR3675460 | Sensitive | lineage4.1.1.3 | None | ERR4815384 | Sensitive | lineage4.3.4.2.1 | gb | ERR4814522 | Sensitive | lineage1.2.1.2.1 | gb | ERR4815319 | Other | lineage4.1.1.3 | gb | ERR4815656 | Sensitive | lineage4.1.2.1 | None | ERR4815353 | Sensitive | lineage3.1.2 | gb | ERR4814442 | Other | lineage4.4.1.1 | None | ERR1750913 | Sensitive | lineage4.1.1.3 | za | SRR3675208 | HR-TB | lineage4.6.2.2 | None | ERR3148149 | RR-TB | lineage4.1.4 | None | ERR1750902 | Sensitive | lineage2.2.1 | za | ERR1750927 | Other | lineage4.3.2.1 | za | ERR3148147 | RR-TB | lineage4.1.2 | None | ERR4815926 | Sensitive | lineage3 | None | ERR4815485 | Sensitive | lineage4.9 | None | ERR4814832 | Sensitive | lineage3 | gb | ERR4815852 | Sensitive | lineage4.3.4.2.1 | None | ERR4814805 | Sensitive | lineage4.9 | None | ERR4814811 | Sensitive | lineage3.1.2.2 | None | ERR4815998 | Sensitive | lineage4.9 | None | ERR2229713 | Sensitive | lineage4.8 | dk | ERR4816185 | Sensitive | lineage3 | None | ERR4816259 | Sensitive | lineage3.1.1 | None | SRR1735692 | Sensitive | lineage4.1.2.1 | gb | SRR3675589 | Sensitive | lineage4 | None | ERR4816553 | Sensitive | lineage3 | None | ERR4816086 | Other | lineage4.2.2.2 | None | ERR4816370 | Sensitive | lineage3 | gb | ERR4816515 | Sensitive | lineage1.2.1.2.1 | None | ERR4816635 | Other | lineage4.1.1 | gb | ERR2229678 | HR-TB | lineage4.8 | None | ERR552917 | MDR-TB | lineage4.1.1.3 | sz | ERR4817737 | Sensitive | lineage4.4.1.1 | None | ERR4817292 | Sensitive | lineage4.3.4.2.1 | None | ERR2229496 | Sensitive | lineage4 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2513048 | Sensitive | lineage3 | gb | ERR4819010 | Sensitive | lineage4.9 | None | ERR2513159 | Sensitive | lineage3 | None | ERR2513133 | Sensitive | lineage3 | gb | ERR2513446 | Sensitive | lineage3 | None | ERR2513440 | Other | lineage4.1.1.3 | None | ERR2513170 | Sensitive | lineage4.3.4.2 | gb | ERR4818194 | Sensitive | lineage4.3.4.1 | None | ERR4818866 | Sensitive | lineage4.6.1 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4818346 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2503369 | Sensitive | lineage4.1.2.1 | None | ERR4818619 | Sensitive | lineage3 | None | ERR2512754 | Sensitive | lineage4.1.1.3 | gb | ERR2513302 | Other | La1.8.1 | None | ERR2512892 | Sensitive | lineage4.1.2.1 | None | ERR2512675 | Other | La1.8.2 | gb | ERR2503474 | Sensitive | lineage4.2.1.1 | None | ERR4818544 | Other | lineage1.2.1.2.1 | None | ERR4818952 | Other | lineage3 | None | ERR4817553 | Sensitive | lineage4.1.2.1 | gb | ERR4819102 | HR-TB | lineage4.8 | gb | ERR4819090 | HR-TB | lineage2.2.1 | None | ERR2513512 | Sensitive | lineage4.6 | None | ERR2514109 | HR-TB | lineage2.2.1 | None | ERR4820245 | Sensitive | lineage3.1.1 | None | ERR4819257 | Sensitive | lineage3 | gb | ERR2513628 | Other | lineage4.1.2.1 | None | ERR4819240 | Other | La1.8.2 | None | SRR5341222 | Sensitive | lineage3.1 | None | ERR4819527 | Sensitive | lineage4.9 | None | ERR2514345 | Other | lineage4.8 | gb | SRR5341235 | Pre-XDR-TB | lineage3 | in | SRR5341232 | HR-TB | lineage3.1.2 | in | SRR5341238 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4819867 | Other | lineage1.1.3.2 | None | SRR5341263 | Sensitive | lineage3.1.2 | in | ERR4819799 | Sensitive | lineage3.1.1 | gb | SRR5341262 | Sensitive | lineage3 | None | ERR4820501 | Sensitive | lineage4.9 | None | ERR2514913 | Other | None | ERR2514867 | MDR-TB | lineage3 | gb | ERR2514869 | Other | lineage3 | None | ERR498359 | Sensitive | lineage4.1.2.1 | de | ERR2514920 | Sensitive | lineage1.1.2 | None | ERR4820979 | Other | lineage3 | None | ERR2515069 | Other | lineage4.4.1.1 | gb | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821110 | Other | lineage2.2.1.2 | None | ERR4821038 | Sensitive | lineage4.9 | None | SRR5486083 | Other | La1.2 | None | ERR4821831 | Sensitive | lineage4.1.1.3 | gb | SRR20139569 | RR-TB | lineage4.1.2.1 | None | SRR6045505 | Sensitive | lineage4.8 | gb | SRR5657364 | Other | La1.8.1 | None | ERR4821905 | Sensitive | lineage4.4.1.1 | gb | ERR4821362 | Sensitive | lineage2.2.1 | None | ERR4821202 | Other | La1.8.1 | gb | ERR4821940 | Other | lineage4.9 | None | ERR4822051 | Sensitive | lineage4.3.3 | None | ERR4821425 | Sensitive | lineage4.1.1.3.1 | gb | ERR4822068 | Sensitive | lineage4.1.2.1 | None | ERR4821595 | Other | lineage4.1.1.3 | None | ERR4821586 | Sensitive | lineage4.3.1.1 | gb | ERR4822232 | Other | lineage4.3.4.2 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | ERR4821626 | Sensitive | lineage4.1.1.2 | gb | SRR6045613 | Other | lineage3.1.3 | None | SRR6044989 | Sensitive | lineage3;lineage2.2.1 | gb | SRR6045093 | Sensitive | lineage4.1.2 | gb | SRR6045309 | Sensitive | lineage4.1.1.3.1 | gb | SRR6046067 | Sensitive | lineage4.6 | None | SRR6046442 | Other | lineage3 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045365 | Other | lineage3 | gb | SRR6045396 | Other | lineage4.3.1.1 | None | SRR6046743 | Other | lineage3 | None | SRR6257101 | MDR-TB | lineage2.2.1 | ru | SRR6046838 | RR-TB | lineage2.2.1.1 | gb | SRR6046851 | Other | lineage4 | None | SRR6458388 | Pre-XDR-TB | lineage2.2.1 | None | SRR6650255 | Sensitive | lineage2.2.1 | None | SRR6511627 | Sensitive | lineage4.3.3 | None | SRR6256992 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257100 | Other | lineage2.2.1 | ru | ERR4831972 | HR-TB | lineage2.2.1.1 | None | ERR3077966 | MDR-TB | lineage3.1.1 | None | SRR6982080 | HR-TB | lineage4.3.4.2.1 | None | ERR4831999 | MDR-TB | lineage2.2.1 | None | ERR4831988 | HR-TB | lineage4.4.1.2;lineage2.2.1 | vn | ERR4832040 | HR-TB | lineage2.1 | None | ERR4832014 | MDR-TB | lineage2.2.1 | vn | ERR4831810 | MDR-TB | lineage2.2.1 | vn | ERR4832046 | MDR-TB | lineage2.2.1 | None | ERR4831746 | MDR-TB | lineage2.2.1 | None | SRR6896145 | Sensitive | lineage4.3.4.2.1 | None | ERR4831814 | MDR-TB | lineage2.2.1 | vn | SRR6982100 | Sensitive | lineage4.4.1.1.1 | None | SRR6896170 | Sensitive | lineage4.3.4.2.1 | None | SRR6982234 | RR-TB | lineage4.1.1.3 | None | SRR6832313 | Sensitive | lineage2.2.1 | None | SRR6982449 | Sensitive | lineage4.1.1.3 | None | SRR6982252 | Sensitive | lineage4.3.2.1 | None | SRR6797463 | Sensitive | lineage1.1.3 | None | SRR6982281 | Sensitive | lineage4.4.1.1 | None | SRR6982301 | Sensitive | lineage4.1.1 | None | SRR6832810 | MDR-TB | lineage2.2.1 | None | SRR6981920 | Sensitive | lineage4.3.4.2.1 | None | SRR6964661 | Sensitive | lineage3 | None | SRR6981909 | Sensitive | lineage4.4.1.1 | None | SRR6981916 | Sensitive | lineage4.1.1 | None | SRR6964658 | HR-TB | lineage3 | None | ERR5165814 | Sensitive | lineage4.3.3 | None | SRR6982362 | Other | lineage4.3.2.1 | None | ERR3077902 | Sensitive | lineage1.2.1.2.1 | None | SRR6982393 | Sensitive | lineage4.3.2.1 | None | ERR4831890 | HR-TB | lineage2.2.1 | None | ERR4831898 | MDR-TB | lineage2.2.1 | None | ERR4831923 | MDR-TB | lineage2.2.1 | vn | SRR9940986 | HR-TB | lineage4.9 | None | SRR9940962 | Sensitive | lineage4.9 | None | SRR8073661 | Other | La1.8.1 | None | ERR10430685 | Sensitive | La2 | None | DRR034530 | Sensitive | lineage1.1.1.1 | None | DRR185077 | HR-TB | lineage2.2.1 | vn | DRR034525 | HR-TB | lineage1.2.1.2.1 | None | DRR184941 | Sensitive | lineage2.2.1 | vn | ERR4132443 | Sensitive | lineage4.1 | None | ERR10430717 | HR-TB | La2 | None | ERR1367665 | Sensitive | lineage4.3.4.1 | None | ERR3803985 | Sensitive | lineage2.2.1 | None | ERR4132447 | HR-TB | lineage4 | None | ERR4192359 | Sensitive | lineage6.3.1 | None | ERR4407468 | HR-TB | lineage4.3.4.2.1 | None | ERR4407512 | Sensitive | lineage1.1.2 | None | ERR4407548 | HR-TB | lineage4.1.2.1 | None | ERR4407535 | Sensitive | lineage4.3 | None |
|---|
