Rv1854c - c.304delG
Drug resistance types
0 Sensitive
1 RR-TB
1 HR-TB
77 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 92 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5526917 | MDR-TB | lineage2.2.1.1 | None | SRR5526844 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5551225 | MDR-TB | lineage2.2.1.1 | pg | SRR5552561 | MDR-TB | lineage2.2.1.1 | pg | SRR6117329 | MDR-TB | lineage2.2.1.1 | au | SRR6117337 | MDR-TB | lineage2.2.1.1 | au | SRR15600390 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15661605 | MDR-TB | lineage2.2.1.1 | None | SRR5526782 | MDR-TB | lineage2.2.1.1 | None | SRR5526903 | MDR-TB | lineage2.2.1.1 | None | SRR5527202 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5526904 | MDR-TB | lineage2.2.1.1 | None | SRR6079924 | MDR-TB | lineage2.2.1.1 | au | SRR15600343 | MDR-TB | lineage2.2.1.1 | None | SRR15600364 | MDR-TB | lineage2.2.1.1 | None | SRR5525980 | MDR-TB | lineage2.2.1.1 | None | SRR5525996 | MDR-TB | lineage2.2.1.1 | pg | SRR5526787 | MDR-TB | lineage2.2.1.1 | pg | SRR5527176 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5533129 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5552377 | MDR-TB | lineage2.2.1.1 | pg | SRR15600380 | MDR-TB | lineage2.2.1.1 | None | SRR5527196 | MDR-TB | lineage2.2.1.1 | None | SRR5552415 | MDR-TB | lineage2.2.1.1 | pg | SRR5551666 | MDR-TB | lineage2.2.1.1 | pg | SRR5527198 | MDR-TB | lineage2.2.1.1 | None | SRR5525984 | MDR-TB | lineage2.2.1.1 | None | SRR5525981 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5526157 | MDR-TB | lineage2.2.1.1 | None | SRR5526785 | MDR-TB | lineage2.2.1.1 | pg | SRR6079921 | MDR-TB | lineage2.2.1.1 | au | SRR5533151 | MDR-TB | lineage2.2.1.1 | None | SRR5526143 | MDR-TB | lineage2.2.1.1 | None | SRR5527200 | MDR-TB | lineage2.2.1.1 | None | SRR6117334 | MDR-TB | lineage2.2.1.1 | au | SRR5526775 | MDR-TB | lineage2.2.1.1 | pg | SRR6079967 | MDR-TB | lineage2.2.1.1 | au | SRR6079937 | MDR-TB | lineage2.2.1.1 | au | SRR15661598 | XDR-TB | lineage2.2.1.1 | None | SRR5533131 | RR-TB | lineage2.2.1.1 | None | SRR6079938 | MDR-TB | lineage2.2.1.1 | au | SRR5526788 | MDR-TB | lineage2.2.1.1 | None | SRR5550936 | MDR-TB | lineage2.2.1.1 | pg | SRR6079953 | MDR-TB | lineage2.2.1.1 | au | SRR5533179 | MDR-TB | lineage2.2.1.1 | pg | SRR5526360 | MDR-TB | lineage2.2.1.1 | None | SRR5551477 | MDR-TB | lineage2.2.1.1 | pg | SRR5527201 | MDR-TB | lineage2.2.1.1 | pg | SRR15661595 | MDR-TB | lineage2.2.1.1 | None | SRR5527175 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5527199 | MDR-TB | lineage2.2.1.1 | pg | SRR15600387 | MDR-TB | lineage2.2.1.1 | None | SRR5526019 | MDR-TB | lineage2.2.1.1 | pg | SRR5548263 | MDR-TB | lineage2.2.1.1 | pg | SRR6117325 | MDR-TB | lineage2.2.1.1 | au | SRR6117320 | MDR-TB | lineage2.2.1.1 | au | SRR5526846 | MDR-TB | lineage2.2.1.1 | None | SRR5526639 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5551664 | MDR-TB | lineage2.2.1.1 | pg | SRR5526865 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR6040100 | MDR-TB | lineage2.2.1.1 | au | SRR5527179 | MDR-TB | lineage2.2.1.1 | pg | SRR5526842 | MDR-TB | lineage2.2.1.1 | pg | SRR5552459 | MDR-TB | lineage2.2.1.1 | pg | SRR6079930 | MDR-TB | lineage2.2.1.1 | au | SRR5526332 | MDR-TB | lineage2.2.1.1 | None | SRR5526642 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5526839 | MDR-TB | lineage2.2.1.1 | None | SRR15600384 | MDR-TB | lineage2.2.1.1 | None | SRR6079922 | MDR-TB | lineage2.2.1.1 | au | SRR6079931 | MDR-TB | lineage2.2.1.1 | au | SRR6079950 | MDR-TB | lineage2.2.1.1 | au | SRR5525985 | MDR-TB | lineage2.2.1.1 | None | SRR5533249 | MDR-TB | lineage2.2.1.1 | pg | SRR5525982 | MDR-TB | lineage2.2.1.1 | None | SRR5525997 | MDR-TB | lineage2.2.1.1 | None | SRR5526916 | MDR-TB | lineage2.2.1.1 | pg | SRR5533143 | MDR-TB | lineage2.2.1.1 | None | SRR6079966 | MDR-TB | lineage2.2.1.1 | au | SRR15661586 | MDR-TB | lineage2.2.1.1 | None | SRR6117348 | MDR-TB | lineage2.2.1.1 | au | SRR15600394 | MDR-TB | lineage2.2.1.1 | None | SRR5526351 | MDR-TB | lineage2.2.1.1 | pg | SRR15600396 | MDR-TB | lineage2.2.1.1 | None | SRR5533176 | MDR-TB | lineage2.2.1.1 | None | SRR5526915 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR6079915 | MDR-TB | lineage2.2.1.1 | au | SRR5549699 | MDR-TB | lineage2.2.1.1 | pg | SRR6079945 | HR-TB | lineage2.2.1.1 | au | SRR15661597 | MDR-TB | lineage2.2.1.1 | None | SRR5533152 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR6079940 | MDR-TB | lineage2.2.1.1 | au |
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