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SRA data
Rv1854c
- c.333delC
Drug resistance types
1 Sensitive
0 RR-TB
0 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
5
lineage4.3.3
3
lineage4.6.2.2
1
lineage1.2.2.2
1
Showing 1 to 4 of 4 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
10
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR2307652
Pre-XDR-TB
lineage2.2.1
None
ERR2516408
MDR-TB
lineage4.3.3
pe
ERR2600557
Pre-XDR-TB
lineage2.2.1
None
ERR4829984
MDR-TB
lineage4.6.2.2
None
SRR15723139
Sensitive
lineage2.2.1
None
SRR28393254
MDR-TB
lineage4.3.3
None
SRR28394206
MDR-TB
lineage4.3.3
None
SRR3105750
MDR-TB
lineage1.2.2.2
None
SRR5266537
Pre-XDR-TB
lineage2.2.1
ru
SRR8847012
Pre-XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 10 entries
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