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SRA data
Rv1854c
- c.969_970dupGG
Drug resistance types
2 Sensitive
0 RR-TB
0 HR-TB
8 MDR-TB
35 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
25
lineage4.3.3
5
lineage4.1.2.1
3
lineage4.3.4.2
3
lineage1.1.2
2
lineage4.4.1.1;lineage4.7
2
lineage4.1.2.1.1
2
lineage3
1
lineage1.1.2;lineage2.2.1;lineage3
1
lineage2.2.1.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
48
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035240
Pre-XDR-TB
lineage4.3.4.2
pt
ERR11080853
MDR-TB
lineage4.3.3
None
ERR11488661
MDR-TB
lineage4.8
None
ERR13267042
Pre-XDR-TB
lineage4.1.2.1
None
ERR1815552
Pre-XDR-TB
lineage4.3.4.2
None
ERR2307396
Pre-XDR-TB
lineage2.2.1
None
ERR2307521
Pre-XDR-TB
lineage2.2.1
None
ERR2307713
Pre-XDR-TB
lineage2.2.1
None
ERR2503374
Pre-XDR-TB
lineage2.2.1
None
ERR2510838
Pre-XDR-TB
lineage2.2.1
it
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