lineage | Count |
---|---|
lineage3 | 3 |
lineage2.2.1 | 24 |
lineage1.1.3.1 | 1 |
lineage1.2.2.2 | 1 |
lineage1.1.2 | 1 |
lineage4.6.1.1 | 2 |
lineage2.2.1;lineage4 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 34 |
ID | Drug resistance | Lineage | Country iso2 | SRR14088365 | XDR-TB | lineage3 | None | SRR21576707 | Pre-XDR-TB | lineage2.2.1 | None | SRR5894885 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024983 | Pre-XDR-TB | lineage2.2.1 | cn | ERR6362190 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987271 | MDR-TB | lineage2.2.1 | None | SRR6824632 | RR-TB | lineage2.2.1 | cn | SRR16088412 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775608 | RR-TB | lineage2.2.1 | None | ERR7902774 | MDR-TB | lineage1.1.3.1 | None | ERR9119847 | MDR-TB | lineage2.2.1 | None | SAMN03246537 | RR-TB | lineage2.2.1 | cn | SRR1723519 | RR-TB | lineage2.2.1 | cn | SRR13423585 | Sensitive | lineage2.2.1 | None | SRR17406747 | HR-TB | lineage1.2.2.2 | None | SRR12420414 | Sensitive | lineage2.2.1 | None | SRR21576695 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799005 | XDR-TB | lineage3 | in | ERR2510313 | MDR-TB | lineage1.1.2 | pk | SRR21276951 | MDR-TB | lineage2.2.1 | None | SRR2024910 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723815 | RR-TB | lineage2.2.1 | None | ERR6358869 | MDR-TB | lineage4.6.1.1 | None | SRR1723814 | RR-TB | lineage2.2.1 | None | SRR12420406 | Sensitive | lineage2.2.1;lineage4 | None | ERR4011062 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358868 | MDR-TB | lineage4.6.1.1 | None | ERR1873469 | Pre-XDR-TB | lineage2.2.1 | za | SRR22536492 | MDR-TB | lineage4.8 | None | ERR1873399 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748431 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044451 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775607 | Other | lineage2.2.1 | None | ERR2510456 | MDR-TB | lineage3 | pk |
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