Rv1908c - c.18dupA
Drug resistance types
0 Sensitive
0 RR-TB
9 HR-TB
5 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 1 |
| lineage2.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.1.2 | 5 |
| lineage3 | 5 |
| lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.8 | 7 |
| lineage4.8;lineage4.7 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 25 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16151370 | HR-TB | lineage2.2.1.1 | None | SRR20969817 | MDR-TB | lineage2.2.1 | None | SRR1724014 | HR-TB | lineage4.1.1.3 | cn | SAMN02599019 | HR-TB | lineage1.1.2 | in | SAMN02628522 | Pre-XDR-TB | lineage3 | ir | ERR2179621 | HR-TB | lineage4.1.1.3 | cn | SRR6964554 | MDR-TB | lineage4.9 | None | ERR3256151 | HR-TB | lineage4.5 | ph | ERR459445 | Pre-XDR-TB | lineage4.8 | None | ERR11044261 | MDR-TB | lineage4.8;lineage4.7 | None | SRR1172329 | HR-TB | lineage1.1.2 | None | ERR459448 | Pre-XDR-TB | lineage4.8 | None | ERR459447 | Pre-XDR-TB | lineage4.8 | None | SRR1169496 | HR-TB | lineage1.1.2 | None | SRR1172065 | Pre-XDR-TB | lineage3 | None | SRR1172075 | Pre-XDR-TB | lineage3 | None | ERR459443 | MDR-TB | lineage4.8 | None | ERR459442 | MDR-TB | lineage4.8 | None | ERR459444 | Pre-XDR-TB | lineage4.8 | None | ERR459446 | Pre-XDR-TB | lineage4.8 | None | SRR1173062 | Pre-XDR-TB | None | SRR1180179 | Pre-XDR-TB | lineage3 | None | SRR1180135 | HR-TB | lineage1.1.2 | None | SRR1183011 | HR-TB | lineage1.1.2 | None | SRR1182985 | Pre-XDR-TB | lineage3 | None |
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