Rv1908c - c.371delG
Drug resistance types
0 Sensitive
0 RR-TB
30 HR-TB
19 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 15 |
| lineage2.2.2 | 1 |
| lineage5.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.6.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| La1.8.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.2 | 3 |
| lineage4.3.3 | 3 |
| lineage4.9 | 4 |
| lineage3 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.8 | 3 |
| lineage6.2.2 | 1 |
| lineage4.6.1;lineage3.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR4037805 | HR-TB | lineage2.2.1 | None | SRR6397697 | MDR-TB | lineage2.2.2 | ca | ERR551620 | MDR-TB | lineage5.1 | None | ERR2514044 | HR-TB | lineage4.1.2 | None | ERR2516712 | MDR-TB | lineage4.6.1.2 | None | SRR6650125 | HR-TB | lineage1.1.3.1 | None | SRR2100101 | MDR-TB | lineage4.1.1.3.1 | None | SRR5431795 | HR-TB | La1.8.1 | None | ERR270665 | HR-TB | lineage1.2.1.2.1 | None | ERR2179660 | MDR-TB | lineage4.4.2 | cn | SAMEA2534988 | MDR-TB | lineage2.2.1 | uz | ERR4810947 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6930884 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832050 | HR-TB | lineage4.3.3 | None | SRR6832119 | MDR-TB | lineage2.2.1 | None | SRR6789628 | HR-TB | lineage4.9 | None | SRR6832853 | HR-TB | lineage2.2.1 | None | SRR6982071 | HR-TB | lineage4.3.3 | None | ERR2510441 | Pre-XDR-TB | lineage3 | pk | SRR7645784 | HR-TB | lineage4.1.1.3 | None | ERR046985 | MDR-TB | lineage4.1.1.3.1 | None | DRR034526 | HR-TB | lineage2.2.1 | None | DRR130164 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796570 | HR-TB | lineage4.8 | None | ERR10680081 | MDR-TB | lineage6.2.2 | None | ERR9872285 | HR-TB | lineage4.9 | None | ERR3439278 | HR-TB | La1.8.1 | None | ERR5864258 | MDR-TB | lineage2.2.1 | None | ERR5864358 | MDR-TB | lineage2.2.1 | None | ERR4828162 | HR-TB | lineage2.2.1 | vn | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | ERR9872305 | HR-TB | lineage4.9 | None | ERR9872306 | HR-TB | lineage4.9 | None | SRR11972217 | HR-TB | lineage4.8 | None | SRR25207372 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR13583315 | HR-TB | lineage4.1.1 | None | SRR15316526 | MDR-TB | lineage4;lineage2.2.1 | None | ERR11068791 | HR-TB | lineage4.1.2.1 | None | SRR2101767 | HR-TB | lineage4.1.2.1 | None | SRR22424907 | HR-TB | lineage3 | None | ERR11068466 | HR-TB | lineage3 | None | SAMN03246299 | MDR-TB | lineage2.2.1 | cn | SRR1723982 | MDR-TB | lineage4.4.2 | cn | ERR2229597 | HR-TB | lineage4 | None | SRR6824434 | MDR-TB | lineage4.4.2 | cn | ERR1034776 | HR-TB | lineage4.3.3 | pe | SRR3732655 | MDR-TB | lineage4.6.2.2 | None | ERR4816576 | HR-TB | lineage1.1.2 | None | SRR4034202 | HR-TB | lineage4.3.2.1 | None | SRR4033900 | HR-TB | lineage2.2.1 | None | SRR4035719 | MDR-TB | lineage4.1.2 | None | ERR4818067 | HR-TB | lineage4.8 | None | ERR2512474 | HR-TB | lineage1.1.2 | None |
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