lineage | Count |
---|---|
lineage4.1.2 | 28 |
lineage2.2.1 | 13 |
lineage2.1 | 1 |
lineage2.2.1.1 | 2 |
lineage2.2.2 | 1 |
lineage1.1.2 | 4 |
lineage4.3.3 | 3 |
lineage3 | 2 |
lineage4.5 | 1 |
lineage1.2.2.2 | 1 |
lineage5.1.1 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | SRR8923707 | MDR-TB | lineage4.1.2 | None | SRR8923695 | MDR-TB | lineage4.1.2 | None | ERR1352340 | MDR-TB | lineage2.2.1 | cn | SRR6152905 | HR-TB | lineage2.1 | ca | ERR1352341 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6964481 | MDR-TB | lineage2.2.1.1 | None | ERR751851 | HR-TB | lineage2.2.2 | th | ERR4819816 | HR-TB | lineage1.1.2 | None | ERR11082410 | MDR-TB | lineage4.1.2 | None | ERR4798902 | Pre-XDR-TB | lineage2.2.1 | in | ERR2516457 | MDR-TB | lineage4.3.3 | pe | SRR8923703 | MDR-TB | lineage4.1.2 | None | SRR8923706 | MDR-TB | lineage4.1.2 | None | ERR4829896 | MDR-TB | lineage4.1.2 | it | ERR2707055 | MDR-TB | lineage4.1.2 | cd | ERR7910868 | MDR-TB | lineage4.3.3 | pe | ERR4815140 | HR-TB | lineage3 | gb | SRR8923702 | MDR-TB | lineage4.1.2 | None | SRR23691323 | HR-TB | lineage4.5 | None | SRR29231839 | MDR-TB | lineage4.1.2 | None | ERR4799589 | MDR-TB | lineage1.2.2.2 | in | SRR10040484 | MDR-TB | lineage2.2.1 | None | ERR2516397 | MDR-TB | lineage4.1.2 | be | SRR8923697 | MDR-TB | lineage4.1.2 | None | SRR8923692 | MDR-TB | lineage4.1.2 | None | SRR15316524 | MDR-TB | lineage2.2.1 | None | ERR11044871 | HR-TB | lineage1.1.2 | None | ERR1352342 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8923705 | MDR-TB | lineage4.1.2 | None | SRR8923709 | MDR-TB | lineage4.1.2 | None | SRR25515393 | MDR-TB | lineage2.2.1 | None | ERR2503461 | HR-TB | lineage1.1.2 | fi | ERR2706994 | MDR-TB | lineage4.1.2 | cd | SRR8923690 | MDR-TB | lineage4.1.2 | None | SRR8923694 | MDR-TB | lineage4.1.2 | None | SRR29231664 | MDR-TB | lineage4.1.2 | None | SRR29231670 | MDR-TB | lineage4.1.2 | None | ERR2516680 | MDR-TB | lineage4.1.2 | nl | SRR8923701 | MDR-TB | lineage4.1.2 | None | ERR1352343 | Pre-XDR-TB | lineage2.2.1 | cn | SRR21277844 | MDR-TB | lineage2.2.1 | None | SRR8923691 | MDR-TB | lineage4.1.2 | None | SRR8923710 | MDR-TB | lineage4.1.2 | None | ERR1352344 | Pre-XDR-TB | lineage2.2.1 | cn | SRR22424791 | Pre-XDR-TB | lineage1.1.2 | None | ERR13284325 | MDR-TB | lineage4.1.2 | None | SRR16588743 | MDR-TB | lineage2.2.1 | None | ERR3170474 | MDR-TB | lineage5.1.1 | gh | SRR8923704 | MDR-TB | lineage4.1.2 | None | SRR15316399 | MDR-TB | lineage2.2.1 | None | ERR4829730 | MDR-TB | lineage4.1.2 | it | SRR16370493 | MDR-TB | lineage4.3.3 | None | ERR2707151 | MDR-TB | lineage4.1.2 | cd | SRR8923698 | MDR-TB | lineage4.1.2 | None | SRR28394224 | MDR-TB | lineage4.1.2.1 | None | SRR21277631 | HR-TB | lineage2.2.1 | None | SRR6964531 | MDR-TB | lineage2.2.1.1 | None | SRR12882498 | HR-TB | lineage3 | None |
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