lineage | Count |
---|---|
lineage2.2.1 | 27 |
lineage4.8 | 2 |
lineage2.2.2 | 6 |
lineage4.3.4.1 | 3 |
lineage3 | 2 |
lineage4.6.2.2 | 3 |
lineage4.9 | 2 |
lineage5.1 | 1 |
lineage4.4.2 | 3 |
lineage4.1.2.1 | 3 |
lineage1.1.2 | 1 |
lineage4.4.1.1 | 2 |
lineage2.2.1;lineage4.5 | 1 |
lineage4.3.3 | 2 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | SRR25514970 | MDR-TB | lineage2.2.1 | None | SRR29096593 | Sensitive | lineage4.8 | None | SRR1723604 | MDR-TB | lineage2.2.1 | None | SRR6824586 | MDR-TB | lineage2.2.1 | cn | SRR29093829 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011073 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048871 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360565 | Pre-XDR-TB | lineage2.2.2 | kr | ERR4872224 | MDR-TB | lineage4.3.4.1 | None | SRR15465774 | RR-TB | lineage3 | None | ERR4872179 | MDR-TB | lineage4.6.2.2 | None | SRR20969769 | RR-TB | lineage2.2.1 | None | SRR1013571 | Pre-XDR-TB | lineage2.2.2 | None | ERR4827981 | Other | lineage2.2.1 | None | ERR13288936 | XDR-TB | lineage2.2.1 | None | SRR29096522 | Pre-XDR-TB | lineage2.2.1 | None | ERR8976108 | MDR-TB | lineage4.9 | None | SRR1723859 | HR-TB | lineage2.2.1 | cn | ERR3170415 | MDR-TB | lineage5.1 | gh | SRR25515417 | HR-TB | lineage2.2.1 | None | ERR13260497 | MDR-TB | lineage4.9 | None | SRR1723605 | MDR-TB | lineage2.2.1 | None | SRR21277261 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811199 | RR-TB | lineage4.4.2 | cn | ERR2516559 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3324334 | MDR-TB | lineage1.1.2 | None | SRR15316196 | RR-TB | lineage4.4.2 | None | SRR29093898 | RR-TB | lineage2.2.1 | None | ERR13289278 | MDR-TB | lineage4.4.1.1 | None | SRR28044881 | HR-TB | lineage3 | None | SRR28393260 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4829053 | RR-TB | lineage4.6.2.2 | None | ERR9119618 | MDR-TB | lineage4.3.4.1 | None | ERR7911584 | Pre-XDR-TB | lineage2.2.1 | za | SAMN03246349 | MDR-TB | lineage2.2.1 | cn | SRR1048872 | Pre-XDR-TB | lineage2.2.2 | None | SRR6484930 | HR-TB | lineage2.2.1 | None | DRR130099 | Other | lineage2.2.1 | None | ERR9807009 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094447 | Sensitive | lineage4.3.4.1 | None | ERR1034640 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488944 | RR-TB | lineage4.8 | None | SRR25207114 | RR-TB | lineage4.4.2 | None | SRR6824646 | MDR-TB | lineage2.2.1;lineage4.5 | cn | SRR671728 | RR-TB | lineage2.2.1 | cn | ERR8975816 | MDR-TB | lineage4.4.1.1 | None | SRR1013572 | Pre-XDR-TB | lineage2.2.2 | None | SRR13583520 | RR-TB | lineage4.3.3 | None | SRR25207011 | MDR-TB | lineage2.2.1 | None | SRR26331647 | RR-TB | lineage2.2.1 | None | ERR8025724 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011079 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316600 | RR-TB | lineage2.2.1 | None | SRR28393376 | MDR-TB | lineage4.1.2.1 | None | ERR9119577 | MDR-TB | lineage4.6.2.2 | None | SRR5709759 | Pre-XDR-TB | lineage2.2.2 | th | SRR29051029 | RR-TB | lineage4.3.3 | None | SRR1723662 | MDR-TB | lineage2.2.1 | cn |
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