SRR21691134
|
HR-TB
|
lineage3
|
None
|
SRR29772577
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR29772613
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR29772630
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR21689956
|
HR-TB
|
lineage4.5
|
None
|
ERR11138654
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29772396
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR13274721
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29772732
|
MDR-TB
|
lineage3
|
None
|
SRR29016784
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR29772523
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR29772695
|
MDR-TB
|
lineage3.1.2.1
|
None
|
SRR29772788
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29914413
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207165
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10680221
|
MDR-TB
|
lineage1.1.1
|
None
|
ERR4828488
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR8774334
|
HR-TB
|
lineage4.3.3
|
None
|
SRR12882240
|
MDR-TB
|
lineage1.1.3.2
|
None
|
SRR5152916
|
MDR-TB
|
lineage4.2.1;lineage4.3.3
|
None
|
SRR7070577
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13285173
|
MDR-TB
|
lineage4.1.2
|
None
|
ERR1679585
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR176513
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
ERR2020073
|
HR-TB
|
lineage2.2.1;lineage4
|
None
|
ERR7737654
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR10040486
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11608037
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR3675237
|
HR-TB
|
lineage4.1.2.1
|
gb
|
SRR671748
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR29050980
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4809154
|
MDR-TB
|
lineage2.2.1.1
|
za
|
ERR4818290
|
HR-TB
|
lineage3
|
gb
|
ERR751787
|
HR-TB
|
lineage2.2.1
|
th
|
SRR13423557
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9992679
|
MDR-TB
|
lineage4.3.2.1
|
None
|
DRR474076
|
HR-TB
|
lineage4.2.2
|
None
|
DRR130174
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR031486
|
HR-TB
|
lineage2.2.1.2
|
None
|
ERR040135
|
MDR-TB
|
lineage4.6.1.2
|
ug
|
ERR1034602
|
Pre-XDR-TB
|
lineage3.1.2
|
pk
|
ERR9030302
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR25207257
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29051140
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29051250
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29051295
|
HR-TB
|
lineage4.3.3
|
None
|
ERR13290516
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11488379
|
MDR-TB
|
lineage1.1.3.1
|
None
|
SRR29772388
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR1034980
|
HR-TB
|
lineage4.1.1.3
|
za
|
SRR28044737
|
HR-TB
|
lineage3
|
None
|
ERR3275890
|
HR-TB
|
lineage3
|
nl
|
ERR5918135
|
HR-TB
|
lineage2.2.1
|
za
|
SRR1723540
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29126486
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29231746
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4831525
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR4872144
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR12420825
|
HR-TB
|
lineage2.2.1
|
None
|
SRR12420801
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11488953
|
MDR-TB
|
lineage4.1.2
|
None
|
ERR13273202
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1710108
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR1213891
|
MDR-TB
|
lineage4.3.3
|
co
|
SRR25514981
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
ERR4809121
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR4423639
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR3675563
|
HR-TB
|
lineage4.1.2.1
|
gb
|
SRR15315843
|
HR-TB
|
lineage2.2.1
|
None
|
SRR16156252
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR671733
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4024846
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6280311
|
MDR-TB
|
lineage2.2.2
|
cn
|
ERR4797200
|
MDR-TB
|
lineage3.1.2.1
|
in
|
SAMN02414910
|
MDR-TB
|
lineage4.7
|
se
|
SRR6831906
|
HR-TB
|
lineage2.2.1
|
None
|
SRR15661604
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR15723172
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR15316581
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827811
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR29017547
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR10040213
|
MDR-TB
|
lineage2.1
|
None
|
SRR13583365
|
HR-TB
|
lineage4.3.3
|
None
|
ERR11043205
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13290515
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02599184
|
HR-TB
|
lineage1.1.2
|
in
|
ERR3148044
|
MDR-TB
|
lineage4.8
|
None
|
SRR10040316
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6824300
|
MDR-TB
|
lineage4.5
|
cn
|
ERR10748455
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR11662296
|
MDR-TB
|
lineage2.1
|
None
|
ERR11489052
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR24827283
|
Pre-XDR-TB
|
lineage4.2.2
|
None
|
SRR3055716
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10680046
|
MDR-TB
|
lineage6.2.2
|
None
|
SRR1162749
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29016980
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR7737929
|
MDR-TB
|
lineage2.1
|
None
|
SRR21277079
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3148168
|
HR-TB
|
lineage4.1.1.3
|
mx
|
SRR14519834
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR4831634
|
HR-TB
|
lineage1.1.1;lineage2.2.1
|
vn
|
ERR4423638
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR8380943
|
MDR-TB
|
lineage1.1.2
|
in
|
SAMN02414970
|
Pre-XDR-TB
|
lineage4.2.2.2
|
se
|
ERR4828189
|
HR-TB
|
lineage1.1.1.1
|
vn
|
SRR1172978
|
HR-TB
|
lineage3.1.2.1
|
None
|
SRR21887760
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR25827878
|
HR-TB
|
lineage1.1.2
|
None
|
ERR8774267
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR25827485
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR13273373
|
HR-TB
|
lineage4.8
|
None
|
SRR25206992
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813802
|
MDR-TB
|
lineage2.2.1.1
|
br
|
SRR6824633
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR13290598
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR28045374
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR20969857
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831609
|
MDR-TB
|
lineage2.2.1.1
|
vn
|
SRR25206869
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR2179648
|
MDR-TB
|
lineage4.5
|
cn
|
ERR8773798
|
HR-TB
|
lineage4.3.3
|
None
|
ERR11050342
|
HR-TB
|
lineage4.4.2
|
None
|
ERR2707146
|
MDR-TB
|
lineage4.3.3
|
cd
|
ERR2179625
|
HR-TB
|
lineage4.4.2
|
cn
|
SRR1169246
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR671810
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR12420419
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22873605
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4811348
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4829025
|
MDR-TB
|
lineage4.8
|
None
|
ERR4811716
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR25389476
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28514700
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR2024978
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR1167383
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4828599
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR29093638
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR13243511
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR1023403
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12420458
|
HR-TB
|
lineage2.2.1
|
None
|
SRR12420464
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4810858
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR18002893
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1163094
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25534415
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR671862
|
Pre-XDR-TB
|
lineage4.4.2
|
cn
|
ERR11489005
|
MDR-TB
|
lineage3
|
None
|
ERR1034660
|
MDR-TB
|
lineage4.8
|
bg
|
ERR3470549
|
HR-TB
|
lineage3
|
None
|
SRR25515568
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR29539239
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR13289385
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29772461
|
HR-TB
|
lineage4.8
|
None
|
ERR3014601
|
Pre-XDR-TB
|
lineage4.3.1
|
tn
|
ERR4799817
|
HR-TB
|
lineage4.8
|
in
|
ERR4811350
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR688013
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR29017089
|
XDR-TB
|
lineage3
|
None
|
ERR4011971
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR10680069
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10748270
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1169319
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20969831
|
HR-TB
|
lineage2.2.1
|
None
|
SRR13583358
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2516557
|
XDR-TB
|
lineage4.1.4
|
pe
|
ERR2516629
|
MDR-TB
|
lineage4.4.1.1
|
nl
|
SRR6397331
|
HR-TB
|
lineage3
|
ca
|
SRR18002932
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR15014780
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
ERR11044755
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR9807026
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4817277
|
HR-TB
|
lineage4.2.2.2
|
gb
|
DRR261133
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR29093482
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR6964490
|
MDR-TB
|
lineage3
|
None
|
ERR3132241
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR10040428
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4800139
|
HR-TB
|
lineage3
|
None
|
ERR4828520
|
HR-TB
|
lineage2.2.1
|
None
|
ERR1034657
|
MDR-TB
|
lineage4.7
|
bg
|
SRR671840
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR10680129
|
MDR-TB
|
lineage4.1
|
None
|
ERR4812961
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR6824452
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR14782088
|
HR-TB
|
lineage4.8
|
None
|
ERR4820903
|
HR-TB
|
lineage3
|
gb
|
ERR4828995
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
SRR29017031
|
MDR-TB
|
lineage3
|
None
|
ERR13285177
|
MDR-TB
|
lineage4.7
|
None
|
ERR2179633
|
HR-TB
|
lineage4.5
|
cn
|
SRR28393312
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4810940
|
MDR-TB
|
lineage2.2.2
|
cn
|
ERR1034790
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR11067650
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR22461662
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR6865374
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR8773800
|
HR-TB
|
lineage4.3.3
|
None
|
ERR11488859
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2513408
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR21276933
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800122
|
HR-TB
|
lineage3
|
None
|
ERR4810946
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR29231317
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2515859
|
MDR-TB
|
lineage4.3.2.1
|
za
|
ERR1036275
|
MDR-TB
|
lineage4.3.4.1
|
pt
|
SRR6824707
|
MDR-TB
|
lineage2.2.1;lineage4.5
|
cn
|
SRR1146376
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1165585
|
MDR-TB
|
lineage1.2.1.1
|
None
|
ERR11488425
|
MDR-TB
|
lineage3
|
None
|
SRR671725
|
MDR-TB
|
lineage4.4.2
|
cn
|
ERR4817711
|
HR-TB
|
lineage3
|
gb
|
ERR1465900
|
HR-TB
|
lineage4.7
|
ch
|
ERR4831433
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR768047
|
HR-TB
|
lineage2.2.1
|
th
|
ERR4828028
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552774
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR3287519
|
MDR-TB
|
lineage4
|
None
|
SRR29051541
|
HR-TB
|
lineage4.1.2
|
None
|
SRR18693857
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR13286039
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR25515017
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29016914
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2653159
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
ERR11082460
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR10040144
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2843538
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20969884
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9992786
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR12882636
|
MDR-TB
|
lineage3
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6797871
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6824581
|
MDR-TB
|
lineage2.2.1;lineage2.2.2
|
cn
|
ERR3287815
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR1723541
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4822301
|
MDR-TB
|
lineage4.8
|
None
|
SRR2024970
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR6398109
|
HR-TB
|
lineage2.2.1.1
|
ca
|
SRR11348190
|
HR-TB
|
lineage4.3.3
|
None
|
SRR1049621
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR25827302
|
MDR-TB
|
lineage4.8
|
None
|
ERR046778
|
HR-TB
|
lineage4.8.1
|
gb
|
ERR2041755
|
MDR-TB
|
lineage4.8
|
rs
|
ERR3806598
|
HR-TB
|
lineage6.1.3
|
None
|
ERR3132274
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR12420372
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR8380937
|
HR-TB
|
lineage1.1;lineage4.3.4.2
|
in
|
ERR2510575
|
MDR-TB
|
lineage3
|
pk
|
SRR18714942
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR16156259
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9787349
|
HR-TB
|
lineage6.1.3
|
None
|
SAMN02381008
|
HR-TB
|
lineage4.1.1.3
|
ug
|
SRR22137401
|
MDR-TB
|
lineage3
|
None
|
SRR13583412
|
HR-TB
|
lineage4.8
|
None
|
ERR3287371
|
MDR-TB
|
lineage4.3.2
|
pe
|
SRR069970
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR25206868
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR11348207
|
HR-TB
|
lineage1.1.2
|
None
|
SRR6824635
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR6824688
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR7911325
|
MDR-TB
|
lineage4.2.2
|
vn
|
SRR10305699
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR550646
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12420763
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR550647
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1049066
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR1034679
|
MDR-TB
|
lineage4.3.3
|
co
|
SRR15399234
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR6152755
|
HR-TB
|
lineage2.2.1.1
|
ca
|
ERR2510406
|
MDR-TB
|
lineage4.5
|
None
|
SRR18337400
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR28046350
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR12416830
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR8975861
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR671861
|
MDR-TB
|
lineage4.4.2
|
cn
|
ERR11489055
|
MDR-TB
|
lineage3
|
None
|
ERR4813833
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SAMN03246623
|
MDR-TB
|
lineage4.5
|
cn
|
SRR5709823
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
ERR11049815
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR833168
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4828712
|
HR-TB
|
lineage3
|
vn
|
ERR12307397
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.8
|
None
|
ERR688018
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR12142369
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22249630
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28044456
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR12420668
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26937125
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4809267
|
MDR-TB
|
lineage2.2.1.1
|
za
|
SRR25207339
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20969820
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2020072
|
HR-TB
|
lineage4.4.2
|
None
|
SRR1710111
|
MDR-TB
|
lineage2.2.2
|
cn
|
ERR4813049
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4818652
|
HR-TB
|
lineage3
|
None
|
ERR1034586
|
Pre-XDR-TB
|
lineage3.1.2
|
pk
|
ERR13260898
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR067735
|
MDR-TB
|
lineage4.8
|
ru
|
SRR29017492
|
HR-TB
|
lineage2.2.1
|
None
|
SRR2024893
|
MDR-TB
|
lineage2.2.2
|
cn
|
SAMN02403560
|
MDR-TB
|
lineage2.2.1
|
za
|
SRR28044964
|
MDR-TB
|
lineage3
|
None
|
SRR26936960
|
HR-TB
|
lineage2.2.1;lineage4.9
|
None
|
ERR13290452
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1163345
|
MDR-TB
|
lineage1.2.1.1
|
None
|
SRR2024995
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR611419
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6398017
|
HR-TB
|
lineage2.2.1
|
ca
|
ERR11488742
|
MDR-TB
|
lineage1.2.2.1
|
None
|
SRR28393490
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4828487
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR4831706
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR8976054
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662502
|
MDR-TB
|
lineage2.1
|
None
|
SRR15399224
|
HR-TB
|
lineage4.3.2;lineage4.4.1.2
|
None
|
SRR15723223
|
HR-TB
|
lineage2.2.1
|
None
|
SRR921503
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.4.2
|
None
|
SRR17657962
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29017098
|
XDR-TB
|
lineage3
|
None
|
ERR4423683
|
HR-TB
|
lineage4.3.3
|
None
|
SRR15316315
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4553646
|
MDR-TB
|
|
None
|
SRR9971239
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR16370670
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4872108
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR9806890
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR13267485
|
HR-TB
|
lineage3
|
None
|
ERR1035088
|
MDR-TB
|
lineage2.2.1.1
|
vn
|
ERR1394279
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR2184593
|
HR-TB
|
lineage4.1.2
|
None
|
SRR25206859
|
MDR-TB
|
lineage4.5
|
None
|
ERR2984794
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
ERR2984796
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR26399327
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29093755
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR11567804
|
XDR-TB
|
lineage2.2.2
|
None
|
SRR6280305
|
MDR-TB
|
lineage2.2.2
|
cn
|
SRR6824341
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR16156255
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25514993
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2984789
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR29050721
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2510205
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR17657941
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4827580
|
HR-TB
|
lineage4.1.2
|
None
|
SRR25827698
|
HR-TB
|
lineage3
|
None
|
ERR13290559
|
MDR-TB
|
lineage1.2.1.1
|
None
|
ERR10748252
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR2510508
|
HR-TB
|
lineage3
|
pk
|
ERR2510617
|
MDR-TB
|
lineage4.8
|
None
|
ERR4596934
|
MDR-TB
|
lineage1.1.2;lineage3.1.1
|
None
|
ERR4816384
|
HR-TB
|
lineage3
|
gb
|
SRR10040273
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR551575
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013672
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1167382
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6824575
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
ERR11081068
|
HR-TB
|
lineage3
|
None
|
ERR4830805
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR13291124
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1034581
|
Pre-XDR-TB
|
lineage3.1.2
|
pk
|
SRR1723679
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1723689
|
Pre-XDR-TB
|
lineage2.2.1.1
|
cn
|
SRR29051061
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4553452
|
MDR-TB
|
lineage1.1.3.1
|
None
|
ERR4830822
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
SRR6824679
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR553163
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6397779
|
HR-TB
|
lineage3
|
ca
|
SRR1723907
|
MDR-TB
|
lineage4.5
|
None
|
SRR3205962
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4827434
|
HR-TB
|
lineage2.2.1
|
None
|
SRR2100058
|
HR-TB
|
lineage4.1.1.3.1
|
None
|
SRR29772627
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4813212
|
Pre-XDR-TB
|
lineage4.3.2
|
pe
|
SRR7898224
|
Pre-XDR-TB
|
lineage4.1.2.1
|
in
|
DRR130161
|
MDR-TB
|
lineage4.5
|
None
|
SRR16370547
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR13267551
|
HR-TB
|
lineage4.8
|
None
|
ERR2516792
|
MDR-TB
|
lineage4.3.4.1
|
gb
|
ERR11044922
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1173572
|
MDR-TB
|
lineage3
|
None
|
ERR4828572
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR9029873
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR4828593
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR4829979
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR1723738
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798140
|
HR-TB
|
lineage3
|
in
|
SRR067517
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2179635
|
HR-TB
|
lineage4.5
|
cn
|
SRR20969462
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15600344
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR11488850
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR16915745
|
HR-TB
|
lineage2.2.1
|
None
|
ERR6358706
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4831434
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR8774335
|
HR-TB
|
lineage4.3.3
|
None
|
SRR29539451
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
DRR034442
|
HR-TB
|
lineage2.2.1
|
None
|
ERR688034
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR10305991
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR10306012
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16087928
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR10808914
|
HR-TB
|
lineage4.1.2
|
None
|
ERR4830799
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR552914
|
HR-TB
|
lineage2.2.1
|
de
|
SAMN02628506
|
MDR-TB
|
lineage3
|
ir
|
SRR1165366
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR8758880
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4423682
|
HR-TB
|
lineage4.3.3
|
None
|
SRR1166935
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR4596922
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR10828180
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22536491
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR22424766
|
MDR-TB
|
lineage3
|
None
|
SRR24709946
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29017185
|
MDR-TB
|
lineage3
|
None
|
SRR1167151
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR611420
|
HR-TB
|
lineage2.2.1
|
None
|
SRR14519884
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1034662
|
Pre-XDR-TB
|
lineage4.1.2.1
|
bg
|
SRR1723975
|
HR-TB
|
lineage4.4.2
|
cn
|
SRR1162897
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR13583460
|
HR-TB
|
lineage4.8
|
None
|
SRR28045970
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13258518
|
MDR-TB
|
lineage2.1
|
None
|
ERR13289300
|
MDR-TB
|
lineage4.8
|
None
|
ERR2516430
|
Pre-XDR-TB
|
lineage4
|
pe
|
SRR5709891
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR1723553
|
HR-TB
|
lineage2.2.1
|
cn
|
SRR29772775
|
Pre-XDR-TB
|
lineage3.1.2.1
|
None
|
SRR1163288
|
MDR-TB
|
lineage1.2.1.1
|
None
|
SRR13583440
|
HR-TB
|
lineage4.1.2.1
|
None
|
SAMEA5569694
|
MDR-TB
|
lineage4.1.1.1;lineage4.3.4.2
|
None
|
SRR21031706
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1165646
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035166
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR15014698
|
HR-TB
|
lineage3.1.2
|
None
|
ERR6358867
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR25340828
|
HR-TB
|
La1.3;lineage1.2.2.2
|
None
|
ERR228025
|
MDR-TB
|
lineage4.4.1.1
|
ru
|
SRR15600397
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR16370549
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR1723520
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR464729
|
MDR-TB
|
lineage4.4.1.1
|
ch
|
ERR11488402
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13583333
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR5709928
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR6484882
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831454
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4799545
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR4809056
|
MDR-TB
|
lineage2.2.1
|
za
|
ERR4811536
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
DRR185076
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR25206865
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR11043081
|
HR-TB
|
lineage4.8
|
None
|
ERR9993149
|
HR-TB
|
lineage4.4.1.1
|
None
|
SRR10185954
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10305998
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7911180
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR9119258
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1172856
|
HR-TB
|
lineage3.1.2.1
|
None
|
SRR10726043
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
ERR3287548
|
HR-TB
|
lineage4.3.2
|
None
|
SRR1146382
|
MDR-TB
|
lineage4.7
|
None
|
SRR611421
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2984788
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
ERR4830643
|
HR-TB
|
lineage2.2.1
|
tm
|
SRR6824432
|
HR-TB
|
lineage2.2.1.1
|
cn
|
SRR13180315
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR1023416
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26399300
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29231728
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21277683
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26399569
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR4553847
|
MDR-TB
|
|
None
|
ERR11775080
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4829967
|
MDR-TB
|
lineage3
|
None
|
ERR4828915
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR29772832
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR1213948
|
HR-TB
|
lineage1.2.2.2
|
bd
|
ERR9119514
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR5865572
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR176605
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
ERR5917971
|
MDR-TB
|
lineage2.2.1
|
za
|
ERR1213926
|
HR-TB
|
lineage4.1.2.1
|
ma
|
ERR2653066
|
HR-TB
|
lineage4.1.2
|
None
|
ERR4828845
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR25628591
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR18054809
|
Pre-XDR-TB
|
lineage4.4
|
None
|
ERR4796534
|
HR-TB
|
lineage3.1
|
in
|
SRR25389439
|
HR-TB
|
lineage2.2.1
|
None
|
SRR10040372
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1723857
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR1723543
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1193680
|
HR-TB
|
lineage4.3.4.1
|
ch
|
ERR10680077
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR9634268
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR25628575
|
Pre-XDR-TB
|
lineage4.5
|
None
|
ERR3509872
|
MDR-TB
|
lineage1.1.3.2
|
None
|
SRR5074135
|
HR-TB
|
lineage1.1.1.1
|
vn
|
ERR4195823
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR752155
|
HR-TB
|
lineage2.2.1
|
th
|
SRR29050755
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3273120
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13291146
|
HR-TB
|
lineage4.5
|
None
|
SRR10040439
|
Pre-XDR-TB
|
lineage4.5
|
None
|
ERR10680004
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10748542
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4829990
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR5067477
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR7911114
|
Pre-XDR-TB
|
lineage2.2.1
|
vn
|
SRR11662677
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR2024993
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR11082771
|
MDR-TB
|
lineage4.7
|
None
|
ERR2510356
|
HR-TB
|
lineage3
|
pk
|
ERR6358861
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR12420436
|
MDR-TB
|
lineage3
|
None
|
ERR3287517
|
MDR-TB
|
lineage4
|
None
|
SRR25515562
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12142388
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800141
|
MDR-TB
|
lineage3.1.2.1
|
None
|
ERR9029875
|
MDR-TB
|
lineage4.1.1.1;lineage4.3.4.2
|
None
|
ERR6358864
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR4828543
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR26399802
|
HR-TB
|
lineage2.2.1
|
None
|
SRR16156260
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR768022
|
HR-TB
|
lineage4.4
|
th
|
ERR4830884
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR25206874
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516645
|
Pre-XDR-TB
|
lineage4
|
pe
|
SRR25207337
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25628592
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR1146374
|
MDR-TB
|
lineage4.7
|
None
|
ERR550645
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13260565
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1049620
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR25340859
|
MDR-TB
|
La1.3;lineage1.2.2.2
|
None
|
ERR2516665
|
Pre-XDR-TB
|
lineage2.2.1
|
pe
|
ERR2984790
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR960956
|
HR-TB
|
lineage2.2.1
|
cn
|
SRR29539480
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29772661
|
MDR-TB
|
lineage1.1.2
|
None
|
SAMN02360615
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR10748367
|
HR-TB
|
lineage3
|
None
|
SAMEA2535134
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR11081245
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13423559
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3132226
|
HR-TB
|
lineage1.1.3.1
|
None
|
ERR10680080
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR11608039
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR1163490
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21576603
|
MDR-TB
|
lineage1.2.1.2
|
None
|
SRR21277505
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR13583319
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29539413
|
HR-TB
|
lineage2.2.1
|
None
|
SRR30180462
|
MDR-TB
|
lineage2.1
|
None
|
SRR28045388
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR1034992
|
MDR-TB
|
lineage4.3.2.1
|
za
|
SRR29017105
|
MDR-TB
|
lineage1.1.3.1
|
None
|
ERR2446183
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR6358710
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR20969470
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29051270
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR7911324
|
MDR-TB
|
lineage2.2.1.1
|
vn
|
ERR2020044
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR29050939
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4553935
|
HR-TB
|
|
None
|
SRR30180231
|
MDR-TB
|
lineage1.2.1.2
|
None
|
ERR1034723
|
HR-TB
|
lineage4.3.2
|
pe
|
ERR4818410
|
HR-TB
|
lineage4.2.2.2
|
gb
|
SRR1163320
|
MDR-TB
|
lineage4.7
|
None
|
SRR15014749
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR551214
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2984800
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
DRR454965
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6824429
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR960969
|
HR-TB
|
lineage2.2.1
|
cn
|
SAMN02599147
|
HR-TB
|
lineage3.1.2.1
|
in
|
SRR21887754
|
MDR-TB
|
lineage4.5
|
None
|
SRR6824459
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR15315702
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR752016
|
HR-TB
|
lineage2.2.1
|
th
|
SRR8651555
|
Pre-XDR-TB
|
lineage4.4.2
|
cn
|
SRR28858466
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR13258461
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16156684
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7911477
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR11044627
|
MDR-TB
|
lineage6.2.2
|
None
|
ERR1199130
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR24710085
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798898
|
MDR-TB
|
lineage3.1.2.1
|
None
|
ERR13284769
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2653222
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21658764
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR4832025
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR671768
|
MDR-TB
|
lineage4.5
|
cn
|
SRR29093251
|
MDR-TB
|
lineage4.8
|
None
|
ERR3509851
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4818213
|
MDR-TB
|
lineage1.2.1.2.1
|
gb
|
SRR9224918
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865775
|
Pre-XDR-TB
|
lineage4.1.1;lineage4.1.2.1
|
None
|
SAMN03246415
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR10748202
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR13260149
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR1169224
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284891
|
MDR-TB
|
lineage4.1.2
|
None
|
ERR3273222
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516514
|
Pre-XDR-TB
|
lineage4.1.2
|
pe
|
ERR553098
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12006629
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR9121421
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4832004
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR4813930
|
HR-TB
|
lineage4.7
|
br
|
SRR2024981
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR27450510
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4178219
|
Pre-XDR-TB
|
lineage4.1.1;lineage4.1.2.1
|
None
|
SRR28119792
|
HR-TB
|
lineage2.2.1
|
None
|
SRR18693866
|
HR-TB
|
lineage1.1.3.1
|
None
|
SRR28394020
|
XDR-TB
|
lineage4.1.4
|
None
|
ERR3014591
|
MDR-TB
|
lineage4.3.1
|
tn
|
SRR1723926
|
HR-TB
|
lineage4.5
|
cn
|
ERR4829140
|
MDR-TB
|
lineage4.6.2.2
|
ng
|
ERR4796955
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR234263
|
HR-TB
|
lineage2.2.1.2
|
us
|
SRR2024897
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR18149509
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR13288875
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR13278949
|
MDR-TB
|
lineage4.8
|
None
|
SAMN02414909
|
MDR-TB
|
lineage4.7
|
se
|
ERR9030298
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13260427
|
HR-TB
|
lineage4.1.1
|
None
|
SRR6484930
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1163361
|
MDR-TB
|
lineage4.7
|
None
|
ERR553367
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11081908
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR6824334
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
SRR10809026
|
MDR-TB
|
lineage2.1
|
None
|
SRR27332322
|
HR-TB
|
lineage4.2.1
|
None
|
SRR11348189
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02053776
|
MDR-TB
|
lineage2.2.1
|
za
|
SRR12420428
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR067496
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR779893
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR13583307
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR3132134
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1140571
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR16370570
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813842
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR25207039
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1166816
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8975583
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR11043601
|
MDR-TB
|
lineage4.2.2.1
|
None
|
SRR28044838
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR1165521
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206867
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR29017430
|
MDR-TB
|
lineage1.1.3.1
|
None
|
ERR13267433
|
HR-TB
|
lineage4.1.1
|
None
|
SRR12830420
|
HR-TB
|
lineage4.3.3
|
None
|
SRR12212960
|
HR-TB
|
lineage4.9
|
None
|
SRR6824684
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR1049067
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR553161
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR29231323
|
HR-TB
|
lineage4.3.3
|
None
|
SRR29230697
|
HR-TB
|
lineage4.8
|
None
|
SRR067521
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13254277
|
MDR-TB
|
lineage4.5
|
None
|
ERR550645_ERR550647_ERR550646
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR8758884
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR6824431
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
SRR13583503
|
HR-TB
|
lineage4.1.4
|
None
|
SRR13583518
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR5065423
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR551159
|
MDR-TB
|
lineage2.2.1
|
uz
|
SRR1723542
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11488847
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR16156254
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18693868
|
HR-TB
|
lineage1.1.3.1
|
None
|
ERR9030529
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR29050977
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR120409
|
HR-TB
|
La2
|
None
|
SRR11662162
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR10040530
|
MDR-TB
|
lineage4.5
|
None
|
ERR10680079
|
MDR-TB
|
lineage6.2.2
|
None
|
ERR10680227
|
MDR-TB
|
lineage4.8
|
None
|
ERR11083011
|
MDR-TB
|
lineage4.8
|
None
|
ERR10680128
|
MDR-TB
|
lineage6.2.2
|
None
|
ERR10748130
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR15316269
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4827774
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2516534
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR4828563
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR3287826
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4553899
|
HR-TB
|
|
None
|
SRR15014662
|
MDR-TB
|
lineage1.1.2
|
None
|
SAMN02414919
|
MDR-TB
|
lineage2.2.1
|
se
|
ERR3132148
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR11662223
|
MDR-TB
|
lineage2.1
|
None
|
SRR16087940
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR15316208
|
HR-TB
|
lineage4.4.2
|
None
|
ERR2516821
|
MDR-TB
|
lineage3
|
gb
|
ERR2510249
|
Pre-XDR-TB
|
lineage3.1.3
|
pk
|
ERR11488831
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR29440923
|
HR-TB
|
lineage2.2.1
|
None
|
SRR11662333
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN03246291
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR28394026
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR4811605
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR29096523
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SAMN02414955
|
MDR-TB
|
lineage1.2.1.1
|
se
|
ERR3287593
|
HR-TB
|
lineage4.1.4
|
None
|
ERR10680059
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3275336
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
SRR15014692
|
HR-TB
|
lineage1.1.2
|
None
|
SRR25207015
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR987710
|
MDR-TB
|
lineage4.8
|
None
|
SRR29772493
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR10808762
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02414937
|
MDR-TB
|
lineage2.2.1
|
se
|
ERR10748487
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR15315870
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR4830391
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR12420780
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4829154
|
MDR-TB
|
lineage4.6.2.2
|
ng
|
ERR2516706
|
MDR-TB
|
lineage4
|
pe
|
ERR4830845
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR5979473
|
MDR-TB
|
lineage3
|
None
|
ERR751457
|
MDR-TB
|
lineage4.3.2
|
pe
|
SRR5338514
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
ERR9119548
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR671719
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR1035065
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR553097
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16156750
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1144798
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR551475
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22251961
|
HR-TB
|
lineage2.2.1
|
None
|
SRR22424740
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR3105761
|
HR-TB
|
lineage4.8
|
None
|
SRR25389523
|
HR-TB
|
lineage2.2.1
|
None
|
ERR8773779
|
HR-TB
|
lineage2.2.1
|
None
|
SRR12420386
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8976065
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR3290820
|
MDR-TB
|
lineage2.2.1.2
|
None
|
ERR8774269
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR29385365
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02403561
|
MDR-TB
|
lineage2.2.1
|
za
|
ERR4828485
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR4831527
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR30180352
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR25628554
|
MDR-TB
|
lineage4.5
|
None
|
SRR27069443
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351407
|
HR-TB
|
lineage4.8
|
None
|
SRR28393847
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR28046265
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR12916918
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.8
|
None
|
SRR5074065
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR26400066
|
HR-TB
|
lineage4.4.2
|
None
|
SRR28045826
|
MDR-TB
|
lineage3
|
None
|
SRR1162810
|
MDR-TB
|
lineage4.7
|
None
|
SRR26399167
|
HR-TB
|
lineage2.1
|
None
|
ERR13288999
|
MDR-TB
|
lineage4.9.1
|
None
|
ERR4830581
|
MDR-TB
|
lineage2.2.1
|
tm
|
ERR9030473
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR069987
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4828493
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR20969584
|
HR-TB
|
lineage2.2.1
|
None
|
SRR10040205
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2707080
|
MDR-TB
|
lineage4.1.1.1
|
cd
|
ERR9030308
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR16115071
|
Pre-XDR-TB
|
lineage4.2.2
|
None
|
SRR15316367
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11082832
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6398106
|
HR-TB
|
lineage2.2.1.1
|
ca
|
ERR4813639
|
HR-TB
|
lineage4.3
|
None
|
SRR25340883
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28393370
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1144829
|
MDR-TB
|
lineage4.7
|
None
|
ERR10680225
|
MDR-TB
|
lineage4.8
|
None
|
SRR611423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4827578
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29093378
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR29051259
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28240204
|
HR-TB
|
lineage4.8
|
None
|
SRR786668
|
Pre-XDR-TB
|
lineage3
|
None
|
SAMN03246416
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
SRR25207288
|
MDR-TB
|
lineage4.5
|
None
|
ERR13290769
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865573
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5709869
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR30182490
|
HR-TB
|
lineage2.2.1
|
None
|
SRR21887645
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMEA2533364
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR779900
|
MDR-TB
|
lineage4.3.2
|
pe
|
ERR4828577
|
HR-TB
|
lineage2.2.1;lineage4.4.2
|
vn
|
ERR11488796
|
Pre-XDR-TB
|
lineage1.1.3.1
|
None
|
SRR067562
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR553162
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR15316149
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR1013673
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1723908
|
MDR-TB
|
lineage4.5
|
None
|
ERR8773781
|
HR-TB
|
lineage2.2.1
|
None
|
SRR15316491
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11488858
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8773975
|
HR-TB
|
lineage4.8
|
None
|
SRR1173751
|
MDR-TB
|
lineage3
|
None
|
SRR1169288
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12420545
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1723623
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR1723681
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR11488840
|
MDR-TB
|
lineage1.2.2.1
|
None
|
SRR12420434
|
MDR-TB
|
lineage4.5
|
None
|
SRR25515366
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4828308
|
HR-TB
|
lineage2.2.1.1
|
vn
|
SRR25515640
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2706972
|
MDR-TB
|
lineage4.3.3
|
cd
|
ERR11488713
|
MDR-TB
|
lineage1.2.2.1
|
None
|
SRR1723913
|
HR-TB
|
lineage4.5
|
cn
|
SRR25207152
|
MDR-TB
|
lineage4.5
|
None
|
DRR130075
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1165515
|
MDR-TB
|
lineage1.2.1.1
|
None
|
ERR4830830
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
SRR28394004
|
MDR-TB
|
lineage4
|
None
|
SRR12006585
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
ERR7737624
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR5918108
|
HR-TB
|
lineage4.3.2.1
|
za
|
SRR9971151
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR8651558
|
XDR-TB
|
lineage2.2.2
|
cn
|
ERR2843537
|
HR-TB
|
lineage2.2.1
|
None
|
SRR12420731
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1723680
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR751633
|
MDR-TB
|
lineage4.3.2
|
pe
|
ERR2515691
|
MDR-TB
|
lineage3.1.1
|
za
|
ERR2984787
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR29017184
|
XDR-TB
|
lineage3
|
None
|
SRR6914123
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4828519
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR4553570
|
MDR-TB
|
lineage1.1.3.1
|
None
|
SAMEA5570060
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR4828446
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR987775
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR3470547
|
MDR-TB
|
lineage3
|
None
|
SRR18665444
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR10040236
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20632775
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10748243
|
MDR-TB
|
lineage1.2.2.1;lineage2.2.1.1
|
None
|
ERR2707030
|
MDR-TB
|
lineage4.3.3
|
cd
|
SRR26331590
|
MDR-TB
|
lineage4.8
|
None
|
SRR25628553
|
MDR-TB
|
lineage4.5
|
None
|
ERR4818768
|
MDR-TB
|
lineage4.3.3
|
gb
|
SAMN03246292
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR5486891
|
HR-TB
|
lineage4.8
|
None
|
ERR8773821
|
HR-TB
|
lineage4.3.3
|
None
|
SRR3082101
|
MDR-TB
|
lineage4.3.1
|
None
|
ERR4811132
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR29341576
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1723804
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR11069045
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR12420536
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6785270
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2984799
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR29051571
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR25207379
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR13261677
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR13290450
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290600
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR2517569
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR3273153
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR29772833
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR10767002
|
HR-TB
|
lineage4.8
|
None
|
ERR4800622
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
ERR1213825
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SRR1165546
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25628576
|
MDR-TB
|
lineage4.5
|
None
|
SRR1723898
|
HR-TB
|
lineage4.5
|
cn
|
ERR3014597
|
MDR-TB
|
lineage4.3.1
|
tn
|
SRR25207373
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12420745
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1172849
|
HR-TB
|
lineage1.1.2
|
None
|
SRR1144727
|
MDR-TB
|
lineage4.7
|
None
|
ERR553163_ERR553162_ERR553161
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR22873609
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR1165635
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11083003
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR12420574
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11044126
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4830803
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
SRR17658005
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR553098_ERR553097_ERR553096
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22164592
|
HR-TB
|
lineage3
|
None
|
SRR6930927
|
MDR-TB
|
lineage1.2.1.2
|
None
|
ERR4812953
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR15315710
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11044665
|
HR-TB
|
lineage3
|
None
|
ERR3287866
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR1034710
|
MDR-TB
|
lineage4.3.2
|
pe
|
ERR2179628
|
HR-TB
|
lineage4.5
|
cn
|
SRR11662278
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11068939
|
HR-TB
|
lineage4.5
|
None
|
SRR19233759
|
HR-TB
|
lineage3.1.2
|
None
|
SRR26056464
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR1166923
|
MDR-TB
|
lineage4.7
|
None
|
SRR27069462
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4553961
|
HR-TB
|
|
None
|
SRR28467046
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28045859
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28045872
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28044883
|
MDR-TB
|
lineage3.1.2.1
|
None
|
SRR27069387
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119738
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9993232
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR2510548
|
Pre-XDR-TB
|
lineage1.1.2;lineage4
|
pk
|
ERR3335784
|
Pre-XDR-TB
|
lineage2.2.1
|
pk
|
ERR3014598
|
MDR-TB
|
lineage4.3.1
|
tn
|
ERR13290514
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR464730
|
MDR-TB
|
lineage4.4.1.1
|
ch
|
SRR29356701
|
HR-TB
|
lineage3.1.2.1
|
None
|
SRR29385275
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMEA2535184
|
MDR-TB
|
lineage4.1.2.1
|
uz
|
ERR3132178
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR2024984
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR28044901
|
HR-TB
|
lineage3
|
None
|
SRR25206866
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR833001
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27069449
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR29053057
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR28044756
|
MDR-TB
|
lineage3
|
None
|
SRR7781497
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR13290918
|
Pre-XDR-TB
|
lineage4.5
|
None
|
ERR6879022
|
HR-TB
|
lineage4.3.2
|
None
|
ERR13290561
|
MDR-TB
|
lineage1.2.1.1
|
None
|
SRR28045880
|
HR-TB
|
lineage1.1.2
|
None
|
ERR4799535
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR8651619
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13289447
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13290451
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290773
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR29385462
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29440846
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1062901
|
HR-TB
|
lineage4.1.1.3
|
None
|