Rv1908c - p.Ser315Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
34 HR-TB
77 MDR-TB
14 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 58 |
| lineage4.4.1.1 | 2 |
| lineage4 | 1 |
| lineage4.3.3 | 6 |
| lineage4.6 | 2 |
| lineage4.3.2.1 | 4 |
| lineage1.2.2.2 | 9 |
| lineage2.2.1;lineage4.3.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.2 | 4 |
| lineage4.1 | 3 |
| lineage5.1.1 | 2 |
| lineage4.8 | 5 |
| lineage4.1.2.1 | 12 |
| lineage4.3 | 3 |
| lineage4.5 | 1 |
| lineage3 | 2 |
| lineage2.2.1.2 | 1 |
| lineage1.1.1.1;lineage2.2.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 127 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6339645 | MDR-TB | lineage2.2.1 | au | SRR3085339 | MDR-TB | lineage2.2.1 | None | SRR29093762 | HR-TB | lineage4.4.1.1 | None | SRR28393316 | MDR-TB | lineage4 | None | SRR11662504 | MDR-TB | lineage2.2.1 | None | ERR11044842 | HR-TB | lineage2.2.1 | None | ERR11773729 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818616 | MDR-TB | lineage2.2.1 | dj | ERR10748498 | XDR-TB | lineage4.3.3 | None | SRR3082088 | MDR-TB | lineage2.2.1 | None | SRR671869 | MDR-TB | lineage2.2.1 | cn | ERR9119479 | MDR-TB | lineage4.6 | None | ERR9120046 | MDR-TB | lineage4.3.2.1 | None | SRR26937076 | MDR-TB | lineage2.2.1 | None | ERR13291571 | HR-TB | lineage1.2.2.2 | None | ERR2200075 | MDR-TB | lineage2.2.1 | None | DRR188484 | HR-TB | lineage2.2.1 | None | ERR10748557 | MDR-TB | lineage2.2.1;lineage4.3.2.1 | None | SRR14519941 | MDR-TB | lineage1.2.1.2.1 | None | SRR4423177 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR5314269 | MDR-TB | lineage1.1.2 | None | ERR2446332 | MDR-TB | lineage4.1 | nl | SRR15316258 | MDR-TB | lineage2.2.1 | None | ERR4872250 | MDR-TB | lineage5.1.1 | None | SRR24035839 | MDR-TB | lineage2.2.1 | None | ERR4872247 | MDR-TB | lineage4.8 | None | SRR29017160 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR5535695 | HR-TB | lineage4.3.3 | None | ERR7737940 | MDR-TB | lineage2.2.1 | None | SRR12420751 | HR-TB | lineage2.2.1 | None | SRR21733007 | HR-TB | lineage1.1.2 | None | SRR29273627 | MDR-TB | lineage4.1.2.1 | None | SRR15316454 | MDR-TB | lineage2.2.1 | None | SRR6930918 | MDR-TB | lineage2.2.1 | None | SRR26936946 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119639 | MDR-TB | lineage4.8 | None | ERR5987415 | MDR-TB | lineage4.3.2.1 | None | ERR7737841 | MDR-TB | lineage2.2.1 | None | ERR4809021 | MDR-TB | lineage2.2.1 | za | ERR779892 | HR-TB | lineage4.3 | pe | ERR7911109 | MDR-TB | lineage2.2.1 | vn | ERR7911300 | MDR-TB | lineage2.2.1 | vn | SRR24035841 | MDR-TB | lineage2.2.1 | None | ERR2510180 | HR-TB | lineage4.3 | pe | ERR551650 | MDR-TB | lineage2.2.1 | sz | ERR551545 | MDR-TB | lineage2.2.1 | sz | ERR1035062 | HR-TB | lineage4.4.1.1 | za | SRR29017606 | MDR-TB | lineage1.2.2.2 | None | ERR550977 | MDR-TB | lineage2.2.1 | None | SRR28045638 | HR-TB | lineage1.1.2 | None | SRR10305643 | HR-TB | lineage2.2.1 | None | DRR184955 | HR-TB | lineage2.2.1 | vn | ERR6362788 | MDR-TB | lineage2.2.1 | None | SRR13583380 | HR-TB | lineage4.1.2.1 | None | ERR13286057 | MDR-TB | lineage2.2.1 | None | SRR12420581 | MDR-TB | lineage2.2.1 | None | ERR5987360 | MDR-TB | lineage4.3.2.1 | None | SRR15316025 | Pre-XDR-TB | lineage4.5 | None | ERR553313 | MDR-TB | lineage2.2.1 | None | SRR20632813 | MDR-TB | lineage2.2.1 | None | SRR12420659 | HR-TB | lineage2.2.1 | None | ERR9119642 | MDR-TB | lineage5.1.1 | None | ERR553312 | MDR-TB | lineage2.2.1 | None | SRR26936984 | MDR-TB | lineage2.2.1 | None | ERR9119695 | MDR-TB | lineage2.2.1 | None | ERR3275330 | MDR-TB | lineage4.1 | nl | ERR3276104 | MDR-TB | lineage3 | nl | SRR6797365 | HR-TB | lineage2.2.1.2 | None | SRR29017651 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR13439852 | HR-TB | lineage1.1.1.1;lineage2.2.1 | None | ERR4872073 | MDR-TB | lineage4.6 | None | SRR14164750 | HR-TB | lineage4.3.3 | None | SRR29051534 | HR-TB | lineage4.1.2.1 | None | SRR14164407 | HR-TB | lineage4.3.3 | None | ERR13245730 | HR-TB | lineage2.2.1 | None | SRR11662360 | MDR-TB | lineage4.4.2 | None | ERR4797999 | Pre-XDR-TB | lineage4.3 | in | ERR5865067 | MDR-TB | lineage4.8 | None | ERR6866298 | HR-TB | lineage4.1.2.1 | None | ERR4800474 | Pre-XDR-TB | lineage1.1.2 | in | SRR29016885 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR28394038 | MDR-TB | lineage4.1.2.1 | None | ERR4813782 | MDR-TB | lineage4.3.4.1 | br | SRR2024975 | MDR-TB | lineage2.2.1 | cn | SRR2024987 | MDR-TB | lineage2.2.1 | cn | ERR4831734 | HR-TB | lineage1.1.1.1;lineage2.2.1 | vn | SRR10305996 | MDR-TB | lineage2.2.1 | None | ERR133961 | HR-TB | lineage4.1.2.1 | ru | ERR144559 | HR-TB | lineage4.1.2.1 | ru | SAMEA2535298 | MDR-TB | lineage2.2.1 | sz | ERR553058 | MDR-TB | lineage2.2.1 | sz | ERR550976 | MDR-TB | lineage2.2.1 | sz | SRR6824694 | MDR-TB | lineage2.2.1 | cn | SRR18665458 | MDR-TB | lineage4.1.1.3 | None | SRR15723140 | MDR-TB | lineage2.2.1 | None | ERR1034749 | MDR-TB | lineage4.1.1.3 | pe | SRR5065370 | HR-TB | lineage2.2.1 | vn | SRR21690617 | MDR-TB | lineage3 | None | ERR2517547 | MDR-TB | lineage4.1 | nl | ERR3014603 | MDR-TB | lineage4.3.3 | tn | ERR11488424 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR14164771 | HR-TB | lineage4.3.3 | None | SRR16096982 | HR-TB | lineage1.2.2.2 | None | SRR1723538 | MDR-TB | lineage2.2.1 | cn | ERR13285297 | MDR-TB | lineage2.2.1 | None | ERR13285296 | MDR-TB | lineage2.2.1 | None | ERR9120045 | MDR-TB | lineage4.3.2.1 | None | SRR24035840 | MDR-TB | lineage2.2.1 | None | SRR29017647 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11488490 | MDR-TB | lineage2.2.1 | None | SRR29273669 | MDR-TB | lineage4.1.2.1 | None | SRR29017060 | XDR-TB | lineage1.2.2.2 | None | SRR25206915 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709952 | HR-TB | lineage4.8 | None | ERR4813788 | MDR-TB | lineage4.3.4.1 | br | ERR751930 | HR-TB | lineage1.1.1 | th | SRR8651650 | Pre-XDR-TB | lineage4.1.2.1 | cn | ERR4828900 | MDR-TB | lineage4.1.2.1 | None | ERR7911500 | MDR-TB | lineage2.2.1 | vn | SRR11567791 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR21276924 | MDR-TB | lineage2.2.1 | None | SRR18002928 | MDR-TB | lineage2.2.1 | None | ERR11049247 | HR-TB | lineage2.2.1 | None | ERR5865068 | MDR-TB | lineage4.8 | None | ERR11049094 | HR-TB | lineage2.2.1 | None | ERR4814480 | HR-TB | lineage4.1.2.1 | gb | ERR144618 | HR-TB | lineage2.2;lineage4.1.2.1 | ru |
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