Rv1908c - p.Ser315Ile
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
42 HR-TB
47 MDR-TB
15 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage6.3.1 | 10 |
| lineage2.2.1 | 14 |
| lineage4.3.4.2.1 | 7 |
| lineage4.8 | 8 |
| lineage4.5 | 8 |
| lineage1.1.3.1 | 2 |
| lineage3 | 7 |
| lineage4.3.3 | 6 |
| lineage4.1.1.3 | 4 |
| lineage1.1.3.2 | 1 |
| lineage4.9 | 1 |
| lineage1.1.2 | 11 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.4.1.1 | 1 |
| lineage4.1 | 2 |
| lineage4.1.3 | 3 |
| lineage1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.2 | 2 |
| lineage3.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage6.2.2 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02231169 | HR-TB | lineage6.3.1 | None | SRR25207066 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069397 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775046 | HR-TB | lineage4.3.4.2.1 | None | ERR11774842 | HR-TB | lineage4.3.4.2.1 | None | SRR29274021 | MDR-TB | lineage4.8 | None | ERR2179664 | MDR-TB | lineage4.5 | None | SRR29772490 | MDR-TB | lineage1.1.3.1 | None | ERR2510326 | MDR-TB | lineage3 | pk | SRR22251089 | HR-TB | lineage4.3.3 | None | ERR11774839 | HR-TB | lineage4.3.4.2.1 | None | ERR3148159 | MDR-TB | lineage4.1.1.3 | mx | SRR29772808 | MDR-TB | lineage1.1.3.2 | None | ERR4830034 | HR-TB | lineage2.2.1 | None | ERR13284235 | MDR-TB | lineage4.8 | None | SRR21764243 | HR-TB | lineage4.9 | None | SAMN02599036 | HR-TB | lineage1.1.2 | in | ERR1555050 | MDR-TB | lineage4.3.4.1 | None | ERR1555046 | MDR-TB | lineage4.1.2 | None | SRR28044669 | MDR-TB | lineage4.1.2.1 | None | ERR11774838 | HR-TB | lineage4.3.4.2.1 | None | ERR4809307 | MDR-TB | lineage4.4.1.1 | za | ERR11081047 | Pre-XDR-TB | lineage4.1 | None | SRR6824489 | MDR-TB | lineage2.2.1 | cn | ERR4800655 | MDR-TB | lineage3 | None | SRR10305984 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992663 | XDR-TB | lineage4.1.1.3 | None | SRR1180267 | HR-TB | lineage1.1.2 | None | ERR4829738 | HR-TB | lineage4.1.2.1 | it | SRR1049960 | Pre-XDR-TB | lineage6.3.1 | None | SRR7592354 | HR-TB | lineage4.8 | None | SRR7592326 | HR-TB | lineage4.8 | None | SRR21277011 | HR-TB | lineage4.5 | None | ERR13260337 | HR-TB | lineage4.3.3 | None | ERR552844 | HR-TB | lineage4.1.3 | None | ERR3078015 | MDR-TB | lineage4.3.4.2.1 | None | SRR11348196 | HR-TB | lineage1.1.2 | None | SRR6484934 | MDR-TB | lineage2.2.1 | None | ERR13260931 | MDR-TB | lineage3 | None | ERR10680173 | MDR-TB | lineage1.1.1 | None | ERR4827467 | MDR-TB | lineage4.5 | None | SRR29772495 | MDR-TB | lineage1.2.1.2.1 | None | ERR7737951 | MDR-TB | lineage1.1.3.1 | None | SRR11348205 | HR-TB | lineage1.1.2 | None | SRR8380933 | HR-TB | lineage4.2.2 | in | SRR11662144 | MDR-TB | lineage2.2.1 | None | ERR6866793 | MDR-TB | lineage4.3.3 | None | ERR4809104 | HR-TB | lineage4.1.2.1 | za | SRR28393351 | MDR-TB | lineage4.1.2.1 | None | ERR11774848 | HR-TB | lineage4.3.4.2.1 | None | SRR28393263 | MDR-TB | lineage4.1.2.1 | None | ERR5979428 | MDR-TB | lineage3.1 | None | ERR2707201 | MDR-TB | lineage4.6.2.2 | cd | SRR29772409 | MDR-TB | lineage1.2.2.2 | None | ERR5866449 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510187 | MDR-TB | lineage4.3.3 | pe | ERR2514155 | HR-TB | lineage4.1.1.3 | gb | SRR6824457 | MDR-TB | lineage4.5 | cn | SRR6824517 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11774840 | HR-TB | lineage4.3.4.2.1 | None | SRR11348206 | HR-TB | lineage1.1.2 | None | ERR3132292 | HR-TB | lineage1.1.2 | None | SRR998654 | HR-TB | lineage6.3.1 | None | SRR22424738 | HR-TB | lineage3 | None | SRR25827818 | HR-TB | lineage1.1.2 | None | SRR29016996 | MDR-TB | lineage4.3.4.1 | None | SRR29096551 | HR-TB | lineage3 | None | SRR29097012 | HR-TB | lineage3 | None | SRR998649 | Pre-XDR-TB | lineage6.3.1 | None | SRR998651 | Pre-XDR-TB | lineage6.3.1 | None | SRR998652 | HR-TB | lineage6.3.1 | None | ERR13289486 | MDR-TB | lineage4.5 | None | ERR13288844 | HR-TB | lineage4.1.2.1 | None | SRR15315868 | MDR-TB | lineage4.4.2 | None | ERR10679990 | MDR-TB | lineage6.1.3 | None | SRR10305989 | MDR-TB | lineage4.5 | None | ERR13285008 | Pre-XDR-TB | lineage4.1 | None | ERR4831512 | Pre-XDR-TB | lineage3 | pk | SRR1169538 | HR-TB | lineage1.1.2 | None | SRR29772706 | HR-TB | lineage2.2.1 | None | ERR10680031 | MDR-TB | lineage4.1.3 | None | ERR5866450 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774569 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809242 | MDR-TB | lineage4.8 | za | ERR11773712 | HR-TB | lineage4.8 | None | ERR775354 | MDR-TB | lineage4.3.3 | pe | SRR29772511 | MDR-TB | lineage1.1.2 | None | ERR8975943 | MDR-TB | lineage2.2.1 | None | SRR1723922 | MDR-TB | lineage4.5 | None | ERR553139 | MDR-TB | lineage2.2.1 | uz | ERR552843 | HR-TB | lineage4.1.3 | cg | ERR2179807 | MDR-TB | lineage4.2.2 | cn | SRR998653 | HR-TB | lineage6.3.1 | None | SRR998650 | Pre-XDR-TB | lineage6.3.1 | None | ERR8975691 | HR-TB | lineage4.8 | None | ERR3287877 | MDR-TB | lineage4.1.1.3 | pe | SRR1172125 | HR-TB | lineage1.1.2 | None | ERR10680122 | MDR-TB | lineage6.2.2 | None | ERR13288896 | HR-TB | lineage4.8.1 | None | ERR13289487 | MDR-TB | lineage4.5 | None | ERR11081700 | MDR-TB | lineage4.8 | None | SRR29681231 | MDR-TB | lineage4.3.3 | None | SRR998655 | HR-TB | lineage6.3.1 | None | SRR1183087 | HR-TB | lineage1.1.2 | None | SRR998648 | Pre-XDR-TB | lineage6.3.1 | None |
|---|
