lineage | Count |
---|---|
lineage2.2.2 | 2 |
lineage2.2.1 | 67 |
lineage4.6.1.2 | 11 |
lineage2.2.1.1 | 1 |
lineage4.3.3 | 3 |
lineage3 | 1 |
lineage4.7 | 1 |
lineage4.3.4.1 | 2 |
lineage4.6.1.1 | 1 |
lineage2.2.1.2 | 1 |
lineage4.8 | 2 |
lineage4.4.2 | 1 |
lineage4.6.1.2;lineage4.4.1.1 | 4 |
lineage4.1.2.1 | 1 |
lineage2.2 | 1 |
lineage4.3.4.2 | 1 |
lineage4.6.2.2 | 2 |
lineage1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 103 |
ID | Drug resistance | Lineage | Country iso2 | SAMEA2534464 | HR-TB | lineage2.2.2 | kr | SAMN02398702 | Pre-XDR-TB | lineage2.2.1 | kr | ERR550694 | MDR-TB | lineage4.6.1.2 | cg | SAMN02398714 | Pre-XDR-TB | lineage2.2.1 | kr | SRR5526784 | MDR-TB | lineage2.2.1.1 | None | SRR5709994 | MDR-TB | lineage2.2.1 | th | SRR6339665 | MDR-TB | lineage2.2.1 | None | SAMN02414922 | MDR-TB | lineage2.2.1 | se | SAMN02360598 | Pre-XDR-TB | lineage2.2.1 | kr | SRR1723557 | Pre-XDR-TB | lineage2.2.1 | cn | ERR550693 | MDR-TB | lineage4.6.1.2 | cg | ERR4830972 | MDR-TB | lineage2.2.1 | np | ERR4972556 | MDR-TB | lineage4.3.3 | None | SRR6964636 | MDR-TB | lineage3 | None | SRR6824577 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824464 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723555 | MDR-TB | lineage2.2.1 | cn | SRR6824467 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824649 | MDR-TB | lineage2.2.1 | cn | ERR2984785 | MDR-TB | lineage4.7 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR10748453 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023404 | MDR-TB | lineage2.2.1 | None | ERR10748414 | MDR-TB | lineage2.2.1 | None | DRR130149 | RR-TB | lineage2.2.1 | None | ERR038750 | MDR-TB | lineage4.6.1.2 | ug | ERR10748570 | MDR-TB | lineage2.2.1 | None | ERR4596933 | RR-TB | lineage4.6.1.1 | None | ERR3273196 | MDR-TB | lineage2.2.1.2 | None | ERR4553676 | RR-TB | lineage2.2.1 | None | ERR4553743 | MDR-TB | lineage4.8 | None | ERR8699821 | MDR-TB | lineage2.2.1 | None | ERR4808874 | RR-TB | lineage2.2.1 | za | ERR4809174 | RR-TB | lineage2.2.1 | za | ERR4812149 | HR-TB | lineage4.3.3 | pe | ERR5987331 | MDR-TB | lineage2.2.1 | None | ERR7361982 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797498 | Pre-XDR-TB | lineage2.2.1 | in | ERR4811556 | RR-TB | lineage4.4.2 | cn | ERR7737719 | MDR-TB | lineage2.2.1 | None | SRR1013638 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119750 | MDR-TB | lineage2.2.1 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR1013639 | Pre-XDR-TB | lineage2.2.1 | None | SRR10185941 | MDR-TB | lineage4.3.4.1 | None | SRR1049033 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305619 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049032 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049563 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1140664 | MDR-TB | lineage4.6.1.2 | None | SRR1049651 | MDR-TB | lineage4.6.1.2 | None | SRR1049652 | MDR-TB | lineage4.6.1.2 | None | SRR1062873 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1049564 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1062912 | MDR-TB | lineage4.6.1.2 | None | SRR1047988 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808621 | MDR-TB | lineage2.2.1 | None | SRR10808984 | Sensitive | lineage2.2.1 | None | SRR10869226 | MDR-TB | lineage2.2.2 | None | SRR1144766 | Pre-XDR-TB | lineage2.2.1 | None | SRR1140691 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1144802 | MDR-TB | lineage2.2.1 | None | SRR1144805 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163321 | MDR-TB | lineage2.2.1 | None | SRR1146413 | MDR-TB | lineage2.2.1 | None | SRR1144820 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162860 | MDR-TB | lineage2.2.1 | None | SRR1166867 | MDR-TB | lineage2.2.1 | None | SRR1163418 | MDR-TB | lineage2.2.1 | None | SRR1174313 | MDR-TB | lineage4.6.1.2 | None | SRR1173544 | MDR-TB | lineage4.6.1.2 | None | SRR11972218 | MDR-TB | lineage2.2.1 | None | SRR13870370 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423591 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801885 | Sensitive | lineage4.1.2.1 | None | SRR16157046 | MDR-TB | lineage2.2.1 | None | SRR15723080 | Sensitive | lineage2.2.1 | None | SRR16103889 | HR-TB | lineage2.2.1 | None | SRR16156813 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19276617 | Sensitive | lineage4.3.4.2 | None | ERR9806945 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969971 | HR-TB | lineage2.2.1 | None | SRR21747019 | Pre-XDR-TB | lineage2.2.1 | None | ERR11069120 | MDR-TB | lineage2.2.1 | None | ERR11138649 | Pre-XDR-TB | lineage2.2.1 | None | SRR21576673 | Pre-XDR-TB | lineage2.2.1 | None | SRR21713566 | Sensitive | lineage4.3.3 | None | SRR21747030 | MDR-TB | lineage2.2.1 | None | SAMN02398701 | Pre-XDR-TB | lineage2.2.1 | kr | SRR21887776 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414920 | MDR-TB | lineage2.2.1 | se | ERR1679657 | Sensitive | lineage4.6.2.2 | ng | ERR1679645 | Other | lineage4.6.2.2 | None | ERR2184397 | MDR-TB | lineage2.2.1 | pe | SRR1723558 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723559 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723556 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02381022 | MDR-TB | lineage4.6.1.2 | ug | SRR5073563 | Sensitive | lineage2.2.1 | vn | SRR5073771 | HR-TB | lineage2.2.1 | vn | SRR5074134 | HR-TB | lineage1.1.1 | vn | ERR2516357 | MDR-TB | lineage4.8 | be |
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