lineage | Count |
---|---|
lineage2.2.1 | 5 |
lineage4.8 | 14 |
lineage1.1 | 2 |
lineage4.2.1.1 | 2 |
lineage1.2.2.2 | 1 |
lineage4 | 3 |
La1.8.1 | 23 |
lineage3 | 2 |
lineage4.9 | 1 |
La1.2.BCG | 1 |
lineage4.3.3 | 2 |
lineage1.1.2 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 59 |
ID | Drug resistance | Lineage | Country iso2 | SRR1002680 | MDR-TB | lineage2.2.1 | None | ERR2228987 | Sensitive | lineage4.8 | dk | SRR12199424 | Other | lineage1.1 | None | ERR4815528 | Other | lineage4.8 | None | SRR1002683 | Sensitive | lineage4.2.1.1 | None | SRR12199395 | Sensitive | lineage1.2.2.2 | None | SRR12199422 | Other | lineage2.2.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | ERR2228984 | Sensitive | lineage4.8 | None | ERR2229581 | Other | lineage4.8 | None | ERR2229752 | Sensitive | lineage4 | None | ERR2229633 | Sensitive | lineage4.8 | None | ERR2229586 | Other | lineage4.8 | None | ERR2229325 | Other | lineage4.8 | dk | ERR2229482 | Sensitive | lineage4 | None | ERR2229343 | Sensitive | lineage4.8 | dk | ERR2229354 | Sensitive | lineage4.8 | dk | ERR2229392 | Sensitive | lineage4.8 | None | ERR2229429 | HR-TB | lineage4.8 | None | ERR2229798 | Sensitive | lineage4.8 | None | ERR2747605 | Other | La1.8.1 | None | ERR2229490 | Sensitive | lineage4 | None | ERR2228840 | Sensitive | lineage4.8 | None | ERR4818538 | Other | lineage3 | gb | ERR4817754 | Sensitive | lineage4.9 | None | ERR4818908 | Other | La1.2.BCG | None | ERR4818457 | Sensitive | lineage3 | None | ERR4828477 | Other | lineage2.2.1 | None | ERR4827422 | MDR-TB | lineage2.2.1 | None | ERR4828142 | Sensitive | lineage4.3.3 | None | SRR6044769 | Other | lineage1.1.2 | None | ERR4828955 | HR-TB | lineage4.8 | None | ERR4828827 | MDR-TB | lineage4.5 | None | ERR1213933 | Sensitive | lineage4.1.2.1 | pe | ERR5162134 | Other | La1.8.1 | None | SRR6257039 | Sensitive | lineage4.2.1.1 | None | ERR3468433 | Other | La1.8.1 | None | ERR3439291 | Other | La1.8.1 | None | ERR3439565 | Other | La1.8.1 | None | ERR3439576 | Other | La1.8.1 | None | ERR3439473 | Other | La1.8.1 | None | ERR4188191 | Other | La1.8.1 | None | ERR3468495 | Other | La1.8.1 | None | ERR4132441 | Sensitive | lineage2.2.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4188206 | Other | La1.8.1 | None | ERR4188251 | Other | La1.8.1 | None | ERR4188273 | Other | La1.8.1 | None | ERR4188259 | Other | La1.8.1 | None | ERR4188264 | Other | La1.8.1 | None | ERR4188270 | Other | La1.8.1 | None | ERR4188267 | Other | La1.8.1 | None | ERR4188262 | Other | La1.8.1 | None | ERR4188283 | Other | La1.8.1 | None | ERR4188296 | Other | La1.8.1 | None | ERR4188289 | Other | La1.8.1 | None | ERR4188304 | Other | La1.8.1 | None | ERR5866287 | MDR-TB | lineage4.3.3 | None | ERR4188365 | Other | La1.8.1 | None |
---|