Rv1918c - c.1296C>T
Drug resistance types
175 Sensitive
1 RR-TB
23 HR-TB
25 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 5 |
| lineage2.2.1 | 28 |
| 6 | |
| lineage4.3.4.2.1 | 53 |
| lineage3.1.1 | 17 |
| lineage1.1.2 | 5 |
| lineage2.2.1.1 | 1 |
| lineage1.1.3.2 | 9 |
| lineage4.2.1 | 4 |
| lineage4.8 | 15 |
| lineage4.8;lineage2.2.1 | 1 |
| lineage3.1.2.2 | 7 |
| lineage3 | 18 |
| lineage4.1.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.2.1 | 9 |
| lineage4.2.1.1 | 2 |
| lineage4.3.3 | 6 |
| La3 | 2 |
| lineage4.6.2.2 | 6 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.3 | 2 |
| lineage3.1.2 | 2 |
| lineage4.5 | 3 |
| lineage4.7 | 2 |
| lineage3.1 | 2 |
| lineage1.1.3.1 | 4 |
| lineage4.3.4.2 | 2 |
| lineage1.1.3 | 2 |
| lineage1.2.2.2 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2 | 4 |
| lineage4.9.1 | 3 |
| lineage4;lineage1.1.3.2 | 1 |
| lineage4.3.4.2.1;lineage4.3.4.1 | 1 |
| lineage1.2.2.1 | 3 |
| lineage4.1.1.3 | 4 |
| La1.1 | 1 |
| lineage4.3.4.1 | 5 |
| lineage4.4.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage4.3.4.2.1;lineage3.1.2 | 1 |
| lineage3;lineage1.1.2 | 2 |
| lineage4.3.3;lineage2.2.1 | 1 |
| lineage4.4.1.1;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 252 |
Geographic prevalence
Country level data for this variant is available for 143 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR279610 | Other | lineage4.9 | None | ERR279640 | Other | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR323069 | Sensitive | lineage4.3.4.2.1 | mw | ERR323050 | Sensitive | lineage3.1.1 | None | ERR323053 | HR-TB | None | ERR323046 | Sensitive | lineage1.1.2 | mw | ERR025882 | Sensitive | lineage2.2.1.1 | None | ERR323087 | Sensitive | lineage4.3.4.2.1 | mw | ERR323093 | Sensitive | lineage1.1.3.2 | mw | ERR025886 | Sensitive | lineage2.2.1 | None | ERR067750 | Pre-XDR-TB | lineage2.2.1 | ru | ERR067725 | Sensitive | lineage4.2.1 | ru | ERR323097 | HR-TB | lineage3.1.1 | None | ERR067735 | MDR-TB | lineage4.8 | ru | ERR067754 | MDR-TB | lineage2.2.1 | ru | ERR067756 | Sensitive | lineage4.8 | ru | ERR067753 | Sensitive | lineage4.2.1 | ru | ERR067762 | MDR-TB | lineage2.2.1 | ru | ERR067764 | MDR-TB | lineage4.8;lineage2.2.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR072014 | Sensitive | lineage3 | None | ERR072034 | Sensitive | lineage4.1.1 | gb | ERR072067 | Sensitive | lineage3 | None | ERR072031 | Sensitive | lineage3 | gb | ERR072045 | Sensitive | lineage4.8.2 | gb | ERR072059 | Sensitive | lineage3.1.2.2 | None | ERR072080 | Sensitive | lineage3.1.1 | gb | ERR072076 | Sensitive | lineage3.1.2.2 | None | ERR072071 | Other | lineage3 | None | ERR072082 | MDR-TB | lineage4.8 | None | ERR072078 | Sensitive | lineage3.1.2.2 | None | ERR072108 | Sensitive | lineage3.1.1 | None | ERR072098 | Sensitive | lineage4.1.2.1 | None | ERR072107 | Sensitive | lineage4.3.4.2.1 | None | ERR133812 | MDR-TB | lineage4.2.1 | ru | ERR1274699 | Sensitive | lineage4.9 | None | ERR133981 | MDR-TB | lineage4.2.1.1 | ru | ERR133846 | Sensitive | lineage4.3.3 | ru | ERR133971 | Sensitive | lineage4.1.2.1 | ru | ERR144606 | Sensitive | lineage2.2.1 | ru | ERR137274 | MDR-TB | lineage4.2.1 | ru | ERR144600 | Pre-XDR-TB | lineage2.2.1 | ru | ERR3509865 | HR-TB | lineage4.3.4.2.1 | None | ERR330723 | Sensitive | La3 | None | ERR369634 | HR-TB | lineage4.6.2.2 | None | ERR369587 | HR-TB | lineage4.6.2.2 | None | ERR369633 | HR-TB | lineage4.6.2.2 | None | ERR369733 | MDR-TB | lineage4.6.2.2 | None | ERR369662 | HR-TB | lineage4.6.2.2 | None | ERR369642 | HR-TB | lineage4.6.2.2 | None | ERR403222 | MDR-TB | lineage2.2.1 | None | ERR403214 | MDR-TB | lineage2.2.1 | None | ERR403232 | HR-TB | lineage2.2.1 | None | ERR403244 | Pre-XDR-TB | lineage2.2.1 | None | ERR403234 | HR-TB | lineage2.2.1 | None | ERR403307 | MDR-TB | lineage2.2.1 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | SRR1173106 | MDR-TB | lineage4.3.3 | None | SRR1173566 | Other | lineage1.1.2 | None | SRR2100119 | Sensitive | lineage3 | None | SRR2100105 | Sensitive | lineage3 | None | SRR2100113 | Sensitive | lineage3.1.2.2 | None | SRR2100143 | Sensitive | lineage4.3.4.2.1 | None | SRR2100127 | Sensitive | lineage3.1.2.2 | None | SRR2100128 | Sensitive | lineage3.1.2.2 | None | SRR2100131 | MDR-TB | lineage4.8 | None | SRR2100123 | Other | lineage3 | None | SRR2100140 | Sensitive | lineage4.1.2.1 | None | SRR2100144 | Sensitive | lineage3.1.1 | None | SRR2100703 | Sensitive | lineage3 | None | SRR2100646 | Sensitive | lineage3.1.3 | None | SRR2100716 | Sensitive | lineage3.1.2 | None | SRR2100491 | Sensitive | lineage3.1.1 | None | SRR2100651 | Sensitive | lineage1.1.2 | None | SRR2100675 | Other | lineage4.5 | None | SRR2100668 | Other | lineage4.9 | None | SRR2100708 | Other | lineage4.7 | None | SRR2100848 | MDR-TB | lineage3.1 | None | SRR6650135 | Sensitive | lineage1.1.3.1 | None | SRR2101161 | Sensitive | La3 | None | SRR6650168 | Sensitive | lineage4.3.4.2 | None | SRR6650350 | Other | lineage3 | None | SRR6650220 | Other | lineage3 | None | SRR6650379 | Sensitive | lineage4.5 | None | SRR6650303 | Other | lineage2.2.1 | None | SRR6650235 | Other | lineage3 | None | SRR6650361 | Sensitive | lineage3 | None | SRR6650127 | Sensitive | None | SRR6650108 | Sensitive | lineage1.1.3 | None | SRR6650161 | Other | lineage1.1.3 | None | SRR6650391 | Sensitive | lineage1.1.3.1 | None | SRR6650401 | Sensitive | lineage1.2.2.2 | None | SRR6650185 | HR-TB | lineage1.1.3.1 | None | SRR6650106 | Other | lineage3 | None | SRR6650299 | Other | lineage1.1.3.1 | None | ERR176771 | Sensitive | None | SRR6650371 | Sensitive | lineage3 | None | ERR176758 | Sensitive | lineage4.3.4.2.1 | mw | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR176776 | Sensitive | lineage4.8 | mw | ERR176810 | Sensitive | lineage4.3.2.1 | mw | ERR176786 | Sensitive | lineage4.1.2 | mw | ERR176792 | Sensitive | lineage4.8 | mw | ERR181937 | Sensitive | lineage4.3.4.2.1 | mw | ERR176808 | Sensitive | lineage4.9.1 | mw | ERR158578 | MDR-TB | lineage2.2.1 | ru | ERR176820 | Sensitive | lineage4.3.4.2.1 | mw | ERR176822 | Sensitive | lineage4.3.4.2.1 | mw | ERR176813 | Sensitive | lineage4;lineage1.1.3.2 | mw | ERR181964 | Sensitive | lineage4.8 | mw | ERR181940 | Sensitive | lineage3.1.1 | None | ERR181677 | Sensitive | lineage4.3.4.2.1 | mw | ERR181688 | Sensitive | lineage4.3.4.2.1;lineage4.3.4.1 | mw | ERR161130 | Sensitive | lineage4.3.4.2.1 | mw | ERR181682 | Sensitive | lineage1.1.3.2 | mw | ERR161138 | HR-TB | lineage1.2.2.1 | mw | ERR163955 | Sensitive | lineage4.3.4.2.1 | mw | ERR161169 | Sensitive | lineage3.1.1 | mw | ERR161178 | Sensitive | lineage4.3.4.2.1 | mw | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | ERR161180 | Sensitive | lineage1.2.2.2 | mw | ERR163994 | Sensitive | lineage1.1.3.2 | mw | ERR163976 | Other | lineage3 | mw | ERR163949 | Sensitive | lineage4.1.1.3 | mw | ERR163961 | Other | lineage3 | mw | SRR3675228 | Sensitive | lineage4.1.2.1 | gb | ERR181980 | Sensitive | La1.1 | mw | ERR181752 | Sensitive | lineage1.1.3.2 | mw | ERR181996 | Sensitive | lineage4.3.4.1 | mw | ERR181791 | Sensitive | lineage4.3.4.2.1 | mw | ERR190371 | Sensitive | lineage4.3.4.2.1 | mw | ERR164018 | Sensitive | lineage4.3.4.2.1 | mw | ERR181753 | Sensitive | lineage4.3.4.2.1 | mw | ERR181771 | Sensitive | lineage3.1.1 | None | ERR181822 | Sensitive | lineage4.1.2.1 | mw | ERR182010 | Sensitive | lineage1.2.2.1 | mw | ERR181823 | Sensitive | lineage4.1.2.1 | mw | ERR176567 | Sensitive | lineage4.3.4.2.1 | mw | ERR176456 | Sensitive | lineage1.1.3.2 | mw | ERR176481 | Sensitive | lineage3.1.1 | mw | ERR176510 | Sensitive | lineage4.3.4.1 | mw | ERR182020 | Sensitive | lineage4.3.4.2.1 | mw | ERR176511 | Sensitive | lineage4.3.4.2.1 | mw | ERR176513 | HR-TB | lineage4.3.4.2.1 | mw | ERR181833 | Sensitive | lineage4.3.4.2.1 | mw | ERR181836 | Sensitive | lineage4.4.1.1 | mw | ERR176544 | Sensitive | lineage4.6.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176489 | Sensitive | lineage4.3.4.2.1 | None | ERR176519 | Sensitive | lineage4.3.4.2.1 | mw | ERR181845 | Sensitive | lineage4.3.3 | mw | ERR176569 | Sensitive | lineage4.3.4.1 | mw | ERR176572 | Sensitive | lineage4.3.4.1 | mw | ERR176563 | Sensitive | lineage4.3.4.2.1 | mw | ERR182037 | HR-TB | lineage4.3.4.2.1 | mw | ERR176583 | Sensitive | lineage4.1.1.3 | mw | ERR181865 | Sensitive | lineage4.3.4.2.1 | mw | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR176573 | Sensitive | lineage4.4.1.2 | mw | ERR181864 | Sensitive | lineage3.1.1 | None | ERR176594 | Sensitive | lineage4.9.1 | mw | ERR176591 | Sensitive | lineage4.1.2 | mw | ERR176669 | Sensitive | lineage4.3.4.2.1 | mw | ERR176614 | Sensitive | lineage4.3.4.2.1 | mw | ERR181879 | Sensitive | lineage4.3.4.1 | mw | ERR176655 | Sensitive | lineage4.1.1.3 | mw | ERR176598 | Sensitive | lineage4.9.1 | mw | ERR181877 | Sensitive | lineage4.3.4.2.1 | mw | ERR176664 | Sensitive | lineage4.3.4.2.1 | mw | ERR176676 | Sensitive | lineage3.1.1 | None | ERR176678 | Sensitive | lineage4.3.4.2.1 | mw | ERR176670 | Sensitive | lineage3.1.1 | mw | ERR176688 | Sensitive | lineage4.3.4.2.1 | mw | ERR176679 | Sensitive | lineage4.3.4.2.1 | mw | ERR176682 | Sensitive | lineage4.3.3 | mw | ERR176681 | Sensitive | lineage4.3.3 | mw | ERR176683 | Sensitive | lineage4.3.4.2.1 | mw | ERR176715 | Sensitive | lineage4.3.4.2.1 | mw | ERR176703 | Sensitive | lineage4.1.2 | mw | ERR176708 | HR-TB | lineage4.3.4.2 | mw | ERR176691 | Sensitive | lineage4.3.4.2.1 | mw | ERR176689 | Sensitive | lineage1.1.3.2 | mw | ERR176695 | Sensitive | lineage4.3.4.2.1 | mw | ERR176697 | Sensitive | lineage4.3.4.2.1 | mw | ERR176713 | Sensitive | lineage1.1.3.2 | mw | ERR176747 | Sensitive | lineage1.1.3.2 | mw | ERR181890 | Sensitive | lineage4.9 | mw | ERR176750 | Sensitive | lineage4.3.4.2.1 | mw | ERR176731 | Sensitive | lineage3.1.1 | mw | ERR182055 | Sensitive | lineage4.1.1.3 | mw | ERR212059 | HR-TB | lineage4.1.2 | mw | ERR212015 | Sensitive | lineage4.8 | None | ERR212020 | Sensitive | lineage4.8 | mw | ERR212047 | Sensitive | lineage4.8 | mw | ERR212053 | Sensitive | lineage4.3.2.1 | mw | ERR212061 | Sensitive | lineage4.3.4.2.1 | mw | ERR192059 | Other | La1.8.1 | None | ERR212006 | HR-TB | lineage4.3.4.2.1 | mw | ERR212009 | Sensitive | lineage4.3.4.2.1 | mw | ERR212030 | Sensitive | lineage4.8 | mw | ERR212026 | Sensitive | lineage3.1.1 | mw | ERR212031 | Sensitive | lineage3.1.1 | mw | ERR216945 | Sensitive | lineage4.8 | mw | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR212171 | Sensitive | lineage4.3.4.2.1 | mw | ERR216918 | Sensitive | lineage4.3.4.2.1 | None | ERR212081 | Sensitive | lineage2.2.1 | mw | SRR3675572 | Other | None | ERR212124 | Sensitive | lineage4.1.2.1 | mw | ERR221581 | Sensitive | lineage4.3.4.2.1 | mw | ERR216961 | Sensitive | lineage2.2.1 | None | ERR216976 | Sensitive | lineage1.1.2 | None | SRR4033394 | Sensitive | lineage2.2.1 | None | ERR221588 | Sensitive | lineage4.3.4.2.1 | mw | ERR221602 | Sensitive | lineage4.3.4.2.1 | mw | ERR221612 | Sensitive | lineage4.3.4.2.1 | mw | ERR221606 | Sensitive | lineage1.2.2.1 | mw | ERR221618 | MDR-TB | lineage4.3.4.2.1 | mw | ERR221640 | Sensitive | lineage4.3.4.2.1;lineage3.1.2 | None | ERR229938 | Other | lineage4.1.2.1 | ru | ERR228054 | MDR-TB | lineage2.2.1 | ru | ERR228128 | Sensitive | lineage3.1.1 | None | ERR229935 | HR-TB | lineage2.2.1 | ru | ERR229942 | Sensitive | lineage4.8 | ru | ERR229949 | MDR-TB | lineage2.2.1 | ru | ERR229940 | MDR-TB | lineage2.2.1 | ru | ERR229967 | HR-TB | lineage4.8 | ru | ERR229946 | MDR-TB | lineage2.2.1 | ru | ERR229954 | Sensitive | lineage4.1.2.1 | ru | ERR229961 | Pre-XDR-TB | lineage2.2.1 | ru | ERR229979 | Sensitive | lineage4.2.1.1 | ru | ERR229962 | Pre-XDR-TB | lineage2.2.1 | ru | ERR230018 | Sensitive | lineage3.1.3 | None | ERR229983 | HR-TB | lineage4.3.3 | ru | ERR229991 | Sensitive | lineage4.8 | ru | ERR4817968 | Sensitive | lineage2.2.1 | None | ERR229992 | MDR-TB | lineage2.2.1 | ru | ERR230023 | Sensitive | lineage1.1.2 | None | ERR230005 | MDR-TB | lineage2.2.1 | ru | ERR230033 | Sensitive | lineage3;lineage1.1.2 | None | ERR230042 | Other | lineage4.9 | None | ERR230050 | Other | lineage4.5 | None | ERR230083 | Other | lineage4.7 | None | ERR278594 | HR-TB | None | ERR230092 | Sensitive | lineage3.1.2 | None | ERR2512696 | Sensitive | lineage3;lineage1.1.2 | gb | ERR230078 | Sensitive | lineage3 | None | ERR234613 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | SRR4037666 | RR-TB | lineage4.4.1.1;lineage2.2.1 | za | ERR270746 | MDR-TB | lineage3.1 | None | SRR6044910 | Sensitive | lineage3 | None |
|---|
