Rv1918c - c.1557A>G
Drug resistance types
216 Sensitive
3 RR-TB
22 HR-TB
40 MDR-TB
18 Pre-XDR-TB
6 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1.1 | 2 |
| lineage3 | 42 |
| lineage4.8 | 88 |
| La1.7.X-unk4 | 2 |
| La1.4 | 2 |
| lineage4.4.1.1 | 27 |
| lineage1.2.1.2 | 4 |
| lineage2.2.2 | 12 |
| lineage4.3.2 | 2 |
| lineage2.2.1 | 52 |
| lineage4.2.2.2 | 8 |
| lineage4.3.3 | 19 |
| lineage4.3.4.2 | 2 |
| lineage4.4.2 | 6 |
| lineage4.1.2.1 | 14 |
| lineage4.5 | 9 |
| lineage4.1.2 | 4 |
| lineage2.2.1.1 | 2 |
| lineage1.1.2 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4 | 1 |
| lineage1.2.2.2 | 2 |
| lineage2.2.1.2 | 2 |
| lineage3.1 | 1 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage1.2.2.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage4.7 | 2 |
| lineage6.1.3 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 323 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5073793 | HR-TB | lineage1.1.1.1 | vn | SRR6045473 | Sensitive | lineage3 | None | SRR6064834 | Sensitive | lineage4.8 | ca | SRR16058396 | Sensitive | lineage4.8 | None | ERR9125056 | Sensitive | lineage4.8 | None | ERR11049404 | Other | La1.7.X-unk4 | None | ERR2815547 | Other | La1.4 | None | SRR2101004 | Sensitive | lineage3 | None | ERR3258006 | Sensitive | lineage4.4.1.1 | fr | ERR2652942 | Sensitive | lineage4.4.1.1 | None | SRR16058294 | Sensitive | lineage4.8 | None | SRR29096535 | Sensitive | lineage1.2.1.2 | None | SRR16058675 | Sensitive | lineage4.8 | None | ERR13291053 | Pre-XDR-TB | lineage2.2.2 | None | ERR11044120 | Sensitive | lineage4.3.2 | None | ERR11466439 | Sensitive | lineage4.4.1.1 | None | SRR13232522 | MDR-TB | lineage2.2.1 | None | SRR7453040 | Sensitive | lineage4.8 | None | SRR18549003 | HR-TB | lineage2.2.1 | None | ERR9125855 | Other | lineage3 | None | SRR25207243 | MDR-TB | lineage2.2.1 | None | ERR11044164 | MDR-TB | lineage4.2.2.2 | None | SRR7453052 | Sensitive | lineage4.8 | None | SRR28119842 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816031 | Other | lineage4.3.3 | gb | SRR16058398 | Sensitive | lineage4.8 | None | ERR4800107 | Sensitive | lineage3 | None | SRR25207123 | MDR-TB | lineage2.2.1 | None | ERR4811729 | Other | lineage4.3.4.2 | pe | ERR9125176 | Sensitive | lineage4.8 | None | ERR2179748 | Sensitive | lineage4.4.2 | cn | SRR2100863 | Sensitive | lineage3 | None | ERR9027227 | MDR-TB | lineage4.2.2.2 | None | ERR9125143 | Sensitive | lineage4.8 | None | ERR9029916 | Sensitive | lineage4.1.2.1 | None | ERR9125262 | Sensitive | lineage4.8 | None | SRR6280301 | HR-TB | lineage2.2.1 | cn | ERR3257976 | Sensitive | lineage4.4.1.1 | fr | SRR21733152 | Sensitive | lineage4.3.3 | None | ERR11464979 | Sensitive | lineage4.4.1.1 | None | SRR8552933 | Sensitive | lineage3 | None | SRR28045211 | Sensitive | lineage3 | None | SRR28868651 | Sensitive | lineage4.3.3 | None | SRR29681359 | Sensitive | lineage4.8 | None | ERR4813275 | Sensitive | lineage4.1.2.1 | pe | ERR11068316 | MDR-TB | lineage4.5 | None | ERR9125133 | Sensitive | lineage4.8 | None | SRR15369056 | Sensitive | lineage2.2.1 | None | ERR4831275 | MDR-TB | lineage4.2.2.2 | de | ERR8975024 | MDR-TB | lineage4.1.2 | None | SRR13232521 | MDR-TB | lineage2.2.1 | None | ERR4810635 | Sensitive | lineage2.2.1.1 | cn | SAMEA104362069 | Sensitive | lineage4.1.2.1 | None | ERR9125070 | Sensitive | lineage4.8 | None | SRR25514907 | Sensitive | lineage2.2.1 | None | SRR28044532 | Sensitive | lineage3 | None | SRR28045895 | Sensitive | lineage1.1.2 | None | SRR28044496 | Sensitive | lineage3 | None | ERR8665988 | XDR-TB | lineage2.2.1 | None | ERR3257977 | Sensitive | lineage4.4.1.1 | fr | ERR9125074 | Sensitive | lineage4.8 | None | ERR3257974 | Sensitive | lineage4.4.1.1 | fr | ERR9125321 | Sensitive | lineage4.8 | None | ERR9125150 | Sensitive | lineage4.8 | None | ERR4812259 | Sensitive | lineage4.1.2 | None | SRR16058181 | Other | lineage3 | None | SRR12882416 | Sensitive | lineage3.1.2.1 | None | ERR8665907 | Pre-XDR-TB | lineage2.2.1 | None | SRR26399997 | Other | lineage2.2.1 | None | ERR9125119 | Sensitive | lineage4.8 | None | ERR9125369 | Sensitive | lineage4.8 | None | SRR28119719 | MDR-TB | lineage2.2.2 | None | SRR23861916 | Sensitive | lineage4.8 | None | SRR27450634 | Sensitive | lineage2.2.1 | None | ERR13291027 | MDR-TB | lineage2.2.2 | None | SRR25534425 | Other | lineage4.4.2 | None | SRR7131247 | Sensitive | lineage4.8 | None | ERR9125194 | Sensitive | lineage4.8 | None | SRR21685346 | Other | lineage3 | None | ERR4276883 | MDR-TB | lineage4.2.2.2 | None | SRR29385488 | MDR-TB | lineage2.2.1 | None | SRR29126438 | Sensitive | lineage4.1.2.1 | None | ERR13290993 | MDR-TB | lineage2.2.2 | None | ERR11049311 | Sensitive | lineage4.1.2.1 | None | ERR3258004 | Sensitive | lineage4.4.1.1 | fr | ERR9125159 | Sensitive | lineage4.8 | None | ERR9125274 | Sensitive | lineage4.8 | None | ERR9125134 | Sensitive | lineage4.8 | None | ERR9125181 | Sensitive | lineage4.8 | None | ERR9125238 | Sensitive | lineage4.8 | None | SRR13232575 | Pre-XDR-TB | lineage2.2.1 | None | SRR25514979 | HR-TB | lineage2.2.1 | None | ERR8665974 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813944 | Sensitive | lineage4.8 | br | SRR21279466 | Sensitive | lineage4.5 | None | ERR11080984 | Sensitive | lineage4.3.4.1 | None | ERR11044870 | Sensitive | lineage4.2.2.2 | None | SRR21732300 | Sensitive | lineage4.3.3 | None | ERR11466114 | MDR-TB | lineage4.4.1.1 | None | ERR9125069 | RR-TB | lineage4.8 | None | SRR13232660 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232668 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125302 | Sensitive | lineage4.8 | None | ERR11465709 | Sensitive | lineage4.4.1.1 | None | ERR294202 | Sensitive | lineage3 | None | SRR13232785 | MDR-TB | lineage2.2.1 | None | ERR11081471 | Sensitive | lineage4 | None | SRR6063519 | Sensitive | lineage4.8 | ca | ERR4810875 | Sensitive | lineage4.5 | cn | SRR16058278 | Sensitive | lineage4.8 | None | SRR16058530 | Sensitive | lineage4.8 | None | ERR9125083 | Sensitive | lineage4.8 | None | SRR2101043 | Sensitive | lineage3 | None | SRR21576701 | MDR-TB | lineage2.2.2 | None | ERR4812614 | Sensitive | lineage4.1.2.1 | pe | SRR21732169 | Sensitive | lineage4.3.3 | None | SRR21732387 | Sensitive | lineage4.3.3 | None | SRR15723125 | Pre-XDR-TB | lineage2.2.2 | None | ERR9125125 | Sensitive | lineage4.8 | None | ERR9125018 | Sensitive | lineage4.8 | None | SRR16058090 | Sensitive | lineage4.8 | None | SRR20969622 | Sensitive | lineage4.3.4.2 | None | ERR9125178 | Sensitive | lineage4.8 | None | SRR28045900 | Sensitive | lineage3 | None | SRR28706575 | MDR-TB | lineage2.2.1 | None | SRR28044779 | Sensitive | lineage1.2.2.2 | None | SRR28045449 | Pre-XDR-TB | lineage3 | None | SRR28046134 | MDR-TB | lineage2.2.1.2 | None | SRR28044535 | Sensitive | lineage4.4.1.1 | None | ERR13291052 | MDR-TB | lineage2.2.2 | None | SRR29441010 | HR-TB | lineage1.1.1.1 | None | SRR29126737 | Sensitive | lineage4.8 | None | SRR29096230 | Sensitive | lineage1.2.1.2 | None | SRR29681489 | Sensitive | lineage4.1.2.1 | None | SRR30182298 | Sensitive | lineage3.1 | None | ERR9125057 | Sensitive | lineage4.8 | None | SRR21732125 | Sensitive | lineage4.3.3 | None | ERR9125474 | Sensitive | lineage4.8 | None | SRR21732156 | Sensitive | lineage4.3.3 | None | SRR12006524 | Sensitive | lineage1.2.1.2 | None | SRR18495626 | Sensitive | lineage2.2.1 | None | SRR12142423 | Sensitive | lineage2.2.1 | None | ERR8665906 | Pre-XDR-TB | lineage2.2.1 | None | SRR17856659 | Pre-XDR-TB | lineage3 | None | SRR16057902 | Sensitive | lineage4.8 | None | DRR474110 | Sensitive | lineage2.2.1 | None | SRR11567804 | XDR-TB | lineage2.2.2 | None | ERR13276058 | Sensitive | lineage4.8 | None | ERR13291028 | MDR-TB | lineage2.2.1 | None | SRR15316593 | Sensitive | lineage2.2.1 | None | SRR15368729 | Sensitive | lineage2.2.1 | None | ERR9125240 | Sensitive | lineage4.8 | None | ERR9125723 | Sensitive | lineage4.8 | None | SRR28351340 | HR-TB | lineage3 | None | ERR9125145 | Sensitive | lineage4.8 | None | ERR270761 | Sensitive | lineage3 | None | SRR13423632 | Other | lineage2.2.1 | None | SRR13232728 | Pre-XDR-TB | lineage2.2.1 | None | ERR3258005 | Sensitive | lineage4.4.1.1 | fr | SRR21732423 | Sensitive | lineage4.3.3 | None | SRR21732442 | Sensitive | lineage3 | None | ERR11466004 | MDR-TB | lineage4.4.1.1 | None | ERR9125076 | Sensitive | lineage4.8 | None | ERR9125116 | Sensitive | lineage4.8 | None | ERR2815560 | Other | La1.7.X-unk4 | None | ERR9124965 | Sensitive | lineage4.8 | None | ERR9125217 | Sensitive | lineage4.8 | None | ERR11044383 | Sensitive | lineage4.3.2 | None | SRR21732473 | Sensitive | lineage4.3.3 | None | SRR29126961 | Sensitive | lineage4.4.1.1 | None | ERR4813599 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | None | ERR4811578 | Sensitive | lineage4.5 | cn | ERR9124978 | Sensitive | lineage4.8 | None | ERR9125033 | Sensitive | lineage4.8 | None | ERR9125131 | Sensitive | lineage4.8 | None | SRR21732495 | Sensitive | lineage2.2.1 | None | ERR2199782 | HR-TB | lineage3 | de | ERR9125142 | Sensitive | lineage4.8 | None | ERR9125175 | Sensitive | lineage4.8 | None | ERR9125299 | Sensitive | lineage4.8 | None | SRR28044688 | XDR-TB | lineage3 | None | ERR294253 | Sensitive | lineage3 | None | SRR28046086 | Sensitive | lineage1.1.2 | None | SRR25827692 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR9125266 | Sensitive | lineage4.8 | None | ERR4821997 | Sensitive | lineage3 | gb | ERR4596923 | MDR-TB | lineage1.2.2.1 | None | SRR17732463 | Sensitive | lineage2.2.1 | None | ERR9124932 | Sensitive | lineage4.8 | None | ERR9125707 | Other | lineage3 | None | SRR13232717 | XDR-TB | lineage2.2.1 | None | ERR9125010 | Sensitive | lineage4.8 | None | SRR21277546 | HR-TB | lineage2.2.1 | None | ERR9806833 | RR-TB | lineage4.3.4.2.1 | None | ERR3257978 | Sensitive | lineage4.4.1.1 | fr | ERR3257975 | Sensitive | lineage4.4.1.1 | fr | ERR9125110 | Sensitive | lineage4.8 | None | ERR11466477 | MDR-TB | lineage4.4.1.1 | None | ERR9125263 | Sensitive | lineage4.8 | None | ERR9124960 | Sensitive | lineage4.8 | None | ERR4800045 | Sensitive | lineage3 | in | SRR16058021 | Sensitive | lineage4.8 | None | SRR21733206 | Sensitive | lineage1.1.3.1 | None | SRR16058364 | Sensitive | lineage4.8 | None | SRR22250145 | Sensitive | lineage1.1.3.1 | None | ERR9124995 | Sensitive | lineage4.8 | None | SRR13232577 | MDR-TB | lineage2.2.1 | None | SRR13232631 | Other | lineage4.1.2 | None | ERR4596928 | Sensitive | lineage3 | None | ERR3257979 | Sensitive | lineage4.4.1.1 | fr | ERR4815806 | Sensitive | lineage3 | gb | ERR11050856 | Sensitive | lineage3 | None | SRR29772432 | Sensitive | lineage1.1.2 | None | ERR8975347 | Sensitive | lineage4.2.2.2 | None | ERR4276882 | MDR-TB | lineage4.2.2.2 | None | ERR4831395 | Sensitive | lineage4.7 | de | ERR9124919 | Sensitive | lineage4.8 | None | ERR9125019 | Sensitive | lineage4.8 | None | SRR22048429 | Sensitive | lineage4.7 | None | DRR473951 | Sensitive | lineage4.5 | None | ERR9125214 | Sensitive | lineage4.8 | None | SRR7453039 | Sensitive | lineage4.8 | None | SRR10303323 | HR-TB | lineage2.2.1 | None | ERR4819994 | Sensitive | lineage3 | None | ERR10969261 | Other | lineage6.1.3 | None | ERR4810974 | MDR-TB | lineage2.2.1 | cn | ERR6866349 | Sensitive | lineage4.1.2.1 | None | SRR17732473 | Sensitive | lineage2.2.1 | None | SRR14520060 | Sensitive | lineage3 | None | SRR25207038 | MDR-TB | lineage2.2.2 | None | SRR21277407 | HR-TB | lineage4.5 | None | ERR11464951 | Sensitive | lineage4.4.1.1 | None | SRR20969827 | HR-TB | lineage2.2.1.1 | None | ERR9125009 | Sensitive | lineage4.8 | None | SRR8651558 | XDR-TB | lineage2.2.2 | cn | SRR16058587 | Sensitive | lineage4.8 | None | ERR4817468 | Sensitive | lineage4.8 | None | SRR15723011 | Pre-XDR-TB | lineage2.2.2 | None | SRR21732545 | Sensitive | lineage4.3.3 | None | ERR2514586 | Sensitive | lineage4.4.1.1 | gb | ERR4813938 | Sensitive | lineage4.8 | br | ERR5979515 | Sensitive | lineage4.3.3 | None | ERR2600431 | Sensitive | lineage4.8 | None | SRR10040478 | MDR-TB | lineage4.4.2 | None | ERR10680080 | MDR-TB | lineage4.1.2.1 | None | ERR8665993 | MDR-TB | lineage2.2.1 | None | SRR24256319 | Sensitive | lineage4.1.2.1 | None | ERR13262238 | Sensitive | lineage4.5 | None | SRR23316616 | HR-TB | lineage2.2.1 | None | ERR13288745 | MDR-TB | lineage4.1.2 | None | ERR2516392 | MDR-TB | lineage3 | be | ERR9125039 | Sensitive | lineage4.8 | None | ERR9125055 | Sensitive | lineage4.8 | None | ERR11466187 | Sensitive | lineage4.4.1.1 | None | ERR3258009 | Sensitive | lineage4.4.1.1 | fr | ERR11050451 | Sensitive | lineage3 | None | ERR4799787 | MDR-TB | lineage3 | None | ERR11049650 | Sensitive | lineage4.3.3 | None | SRR16058513 | Sensitive | lineage4.8 | None | ERR11465644 | Sensitive | lineage4.3.3 | None | SRR21732285 | Sensitive | lineage4.3.3 | None | SRR6280309 | HR-TB | lineage2.2.1 | cn | ERR11044216 | Other | lineage4.1.2.1 | None | SRR25207278 | MDR-TB | lineage2.2.1 | None | SRR21732436 | Sensitive | lineage4.3.3 | None | SRR29096153 | Sensitive | lineage3 | None | SRR16058080 | Sensitive | lineage4.8 | None | SRR21732542 | Sensitive | lineage4.3.3 | None | ERR270727 | HR-TB | lineage3 | None | ERR4800429 | MDR-TB | lineage1.2.2.2 | in | SRR10430374 | HR-TB | lineage2.2.1 | None | SRR16058059 | Sensitive | lineage4.8 | None | SRR16058480 | Other | lineage3 | None | SRR28045464 | HR-TB | lineage3 | None | SRR26399217 | HR-TB | lineage2.2.1 | None | SRR28119838 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970017 | HR-TB | lineage2.2.1 | None | SRR27450490 | Sensitive | lineage4.3.3 | None | ERR9125089 | Sensitive | lineage4.8 | None | ERR9125329 | Sensitive | lineage4.8 | None | SRR15368792 | Pre-XDR-TB | lineage4.4.2 | None | SRR21277231 | Sensitive | lineage2.2.1 | None | SRR26399343 | HR-TB | lineage2.2.1 | None | SRR28858568 | Other | lineage1.2.1.2 | None | SRR2101082 | Sensitive | lineage4.1.2.1 | None | SRR21732393 | Sensitive | lineage3 | None | ERR9125259 | Sensitive | lineage4.8 | None | SRR16057920 | Sensitive | lineage4.8 | None | SRR16058062 | Sensitive | lineage4.8 | None | SRR21277542 | HR-TB | lineage2.2.1 | None | SRR6807727 | Sensitive | lineage4.4.1.1 | None | ERR11067869 | Sensitive | lineage2.2.1 | None | ERR11067993 | Sensitive | lineage4.4.1.1 | None | SRR12006607 | Sensitive | lineage1.2.1.2.1 | None | SRR16058129 | Sensitive | lineage4.8 | None | SRR20969910 | Sensitive | lineage2.1 | None | SRR21277863 | Pre-XDR-TB | lineage4.4.2 | None | ERR10610072 | RR-TB | lineage4.3.4.2.1 | None | ERR9125115 | Sensitive | lineage4.8 | None | ERR4822509 | Sensitive | lineage4.5 | de | ERR13291444 | Sensitive | lineage3 | None | SRR25534518 | HR-TB | lineage2.2.1 | None | ERR4810828 | Sensitive | lineage4.5 | cn | ERR11049882 | Sensitive | lineage4.1.1.3 | None | SRR21277221 | Sensitive | lineage2.2.1;lineage2.2.2 | None | ERR3258007 | Sensitive | lineage4.4.1.1 | fr | ERR3470585 | Sensitive | lineage4.9 | None | ERR11081199 | Sensitive | lineage4.8 | None | ERR551252 | Other | La1.4 | de | ERR11775600 | Sensitive | lineage4.2.2.2 | None | SRR15315966 | Sensitive | lineage4.4.2 | None | ERR11043866 | Sensitive | lineage4.3.3 | None | ERR11067880 | Sensitive | lineage4.1.2.1 | None | SRR15316343 | HR-TB | lineage2.2.1 | None | SRR15723024 | Pre-XDR-TB | lineage2.2.2 | None | ERR3077990 | MDR-TB | lineage1.2.2.1 | None | SRR11033628 | Sensitive | lineage4.1.2.1 | None | ERR4816840 | Sensitive | lineage3 | None | ERR11465567 | MDR-TB | lineage4.4.1.1 | None | ERR13266566 | Sensitive | lineage3 | None | SRR28351440 | XDR-TB | lineage3 | None | ERR11466515 | MDR-TB | lineage4.4.1.1 | None | ERR4829225 | Sensitive | lineage4.8 | None |
|---|
