Rv1918c - c.1721_1799delNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
Drug resistance types
66 Sensitive
3 RR-TB
3 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 9 |
| lineage2.2.2 | 3 |
| lineage4.3.2.1 | 6 |
| lineage2.2.1 | 7 |
| lineage4.3.3 | 9 |
| lineage4.1.2.1 | 4 |
| lineage4.8 | 15 |
| lineage4.4.2 | 2 |
| lineage1.1.3.1 | 5 |
| lineage4.1.1 | 5 |
| lineage4.6 | 2 |
| lineage5.1.1 | 5 |
| lineage1.2.2.2 | 1 |
| lineage4.2.1 | 5 |
| lineage4.4.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1.2 | 2 |
| lineage4.5 | 2 |
| lineage4.3.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage5.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 91 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16370576 | Sensitive | lineage3 | None | SRR1710095 | Sensitive | lineage2.2.2 | cn | SRR6896244 | Sensitive | lineage4.3.2.1 | None | SRR29055709 | Sensitive | lineage2.2.1 | None | ERR1768624 | Pre-XDR-TB | lineage4.3.3 | None | SRR21658542 | Other | lineage4.1.2.1 | None | ERR2307778 | MDR-TB | lineage2.2.1 | None | SRR6930891 | RR-TB | lineage2.2.2 | None | DRR185008 | Sensitive | lineage2.2.2 | vn | ERR1193664 | Sensitive | lineage4.3.3 | br | ERR3639780 | Pre-XDR-TB | lineage4.3.3 | None | SRR13180286 | Sensitive | lineage4.8 | None | SRR21576552 | RR-TB | lineage4.4.2 | None | ERR911949 | Other | lineage4.8 | None | ERR9125520 | Sensitive | lineage3 | None | SRR19317584 | Sensitive | lineage3 | None | SRR21662811 | Sensitive | lineage1.1.3.1 | None | SRR21713554 | Sensitive | lineage4.1.1 | None | SRR21713566 | Sensitive | lineage4.3.3 | None | ERR13292491 | Sensitive | lineage4.8 | None | SRR16058108 | Sensitive | lineage4.6 | None | SRR29053590 | Sensitive | lineage1.1.3.1 | None | ERR4162019 | HR-TB | lineage5.1.1 | None | SRR29053257 | Sensitive | lineage1.1.3.1 | None | SRR8380927 | Sensitive | lineage1.2.2.2 | in | SRR16058196 | Sensitive | lineage4.1.2.1 | None | SRR28409365 | Sensitive | lineage4.8 | None | ERR13291895 | Other | lineage2.2.1 | None | DRR185101 | HR-TB | lineage2.2.1 | vn | SRR6896396 | Sensitive | lineage4.3.2.1 | None | SRR21747033 | MDR-TB | lineage4.4.2 | None | ERR9121467 | Sensitive | lineage4.2.1 | None | SRR21711123 | Sensitive | lineage4.4.1.2 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR21736388 | Sensitive | lineage4.3.3 | None | ERR9121263 | Sensitive | lineage4.8 | None | ERR4195710 | Sensitive | lineage4.1 | None | ERR9121433 | Sensitive | lineage4.3.3 | None | ERR911950 | Other | lineage4.8 | None | SRR29055451 | Other | lineage4.1.2.1 | None | SRR6896252 | Sensitive | lineage4.3.2.1 | None | SRR18912559 | Sensitive | lineage4.1.1 | None | SRR16370668 | Sensitive | lineage3 | None | SRR13180336 | Other | lineage4.8 | None | ERR4162003 | Sensitive | lineage5.1.1 | None | SRR16089635 | Other | lineage2.2.1 | None | ERR4830884 | MDR-TB | lineage4.2.1 | None | ERR9125694 | Sensitive | lineage4.1.2.1 | None | ERR2516026 | Sensitive | lineage4.3.2.1 | za | SRR21675699 | RR-TB | lineage3 | None | SRR29053585 | Sensitive | lineage1.1.3.1 | None | ERR9786445 | Other | lineage4.8 | None | ERR13292399 | Sensitive | lineage4.1.1 | None | ERR4162025 | HR-TB | lineage5.1.1 | None | ERR4195832 | Sensitive | lineage4.3.3 | None | ERR9896107 | Sensitive | lineage5.1.1 | None | SRR21710583 | Sensitive | lineage4.3.4.2 | None | ERR4162004 | Sensitive | lineage5.1.1 | None | SRR18914246 | Sensitive | lineage4.8 | None | SRR19267910 | Sensitive | lineage3 | None | SRR21685361 | Sensitive | lineage4.1.1.2 | None | ERR13291495 | Sensitive | lineage4.1.1.2 | None | ERR4195845 | Sensitive | lineage4.2.1 | None | ERR4195527 | Sensitive | lineage4.1.1 | None | ERR4195831 | Sensitive | lineage4.2.1 | None | SRR21659823 | Sensitive | lineage1.1.3.1 | None | SRR13180264 | Sensitive | lineage4.5 | None | ERR9121692 | Sensitive | lineage4.8 | None | ERR4195326 | Sensitive | lineage4.8 | None | SRR13591340 | Sensitive | lineage4.8 | None | SRR21728324 | Sensitive | lineage4.8 | None | SRR16100730 | Other | lineage2.2.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR21239854 | Sensitive | lineage4.3.3 | None | ERR13194028 | Sensitive | lineage2.2.1 | None | SRR29053616 | Sensitive | lineage3 | None | ERR9121432 | Other | lineage4.2.1 | None | ERR4407516 | Sensitive | lineage4.3.1 | None | ERR13284121 | Pre-XDR-TB | lineage4.3.3 | None | SRR29053217 | Sensitive | lineage3 | None | DRR184992 | Sensitive | lineage1.1.1.1 | vn | SRR16058624 | Other | lineage3 | None | SRR21576631 | MDR-TB | lineage2.1 | None | ERR13291999 | Sensitive | lineage4.3.4.2 | None | SRR13180267 | Sensitive | lineage4.5 | None | SRR13180290 | Sensitive | lineage4.8 | None | SRR16115866 | Sensitive | lineage4.1.1 | None | ERR3256210 | MDR-TB | lineage1.2.1.2.1 | ph | ERR4195730 | Sensitive | lineage4.8 | None | ERR2383624 | Sensitive | lineage5.2 | fr | ERR9125806 | Sensitive | lineage4.6 | None |
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