lineage | Count |
---|---|
lineage4.2.1 | 1 |
lineage2.2.1 | 4 |
lineage4 | 4 |
lineage4.1.1.3 | 1 |
lineage4.4.1.1 | 1 |
lineage4.8.1 | 1 |
lineage1.1.3.2 | 1 |
lineage3.1.2 | 1 |
lineage1.1.2 | 1 |
lineage3 | 3 |
lineage4.8 | 15 |
lineage4.1.2 | 1 |
La1.2.BCG | 1 |
lineage4.5 | 1 |
lineage4.1.1.2 | 1 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 38 |
ID | Drug resistance | Lineage | Country iso2 | SRR6785547 | Sensitive | lineage4.2.1 | None | ERR9119312 | Other | lineage2.2.1 | None | ERR4132447 | HR-TB | lineage4 | None | ERR11465421 | Sensitive | lineage4.1.1.3 | None | SRR11972224 | Sensitive | lineage4 | None | SRR10272564 | Sensitive | lineage4.4.1.1 | None | SRR1173033 | MDR-TB | lineage4.8.1 | None | SRR11972312 | MDR-TB | lineage2.2.1 | None | SRR11972324 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR11972436 | Sensitive | lineage3.1.2 | None | SRR15014765 | MDR-TB | lineage1.1.2 | None | SRR14088350 | Pre-XDR-TB | lineage3 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR21709841 | Sensitive | lineage4.8 | None | SRR21677878 | Sensitive | lineage4.1.2 | None | ERR2229323 | Sensitive | lineage4.8 | None | ERR2229208 | Sensitive | lineage4.8 | None | ERR2229763 | Sensitive | lineage4.8 | dk | ERR2229169 | HR-TB | lineage4.8 | None | ERR2229180 | Other | lineage4 | None | ERR2229228 | HR-TB | lineage4.8 | None | ERR2229477 | Sensitive | lineage4.8 | None | ERR2229655 | Other | lineage4.8 | None | ERR2229382 | Sensitive | lineage4.8 | None | ERR2229447 | Sensitive | lineage4.8 | None | ERR2229688 | Sensitive | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR4818908 | Other | La1.2.BCG | None | ERR2229484 | Sensitive | lineage4 | None | ERR2229491 | HR-TB | lineage4.8 | None | ERR2245351 | Sensitive | lineage3 | None | ERR2515482 | RR-TB | lineage4.8 | None | ERR4820214 | Sensitive | lineage4.5 | None | ERR2513929 | Other | lineage4.1.1.2 | None | ERR4819378 | Other | lineage4.8 | None | ERR2514389 | Other | lineage3 | None | SRR5535892 | MDR-TB | lineage3.1.1 | None |
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