lineage | Count |
---|---|
lineage4.8.2 | 2 |
lineage2.2 | 1 |
lineage4.3.4.1 | 1 |
lineage1 | 1 |
lineage3 | 14 |
lineage2.2.1 | 18 |
lineage4.3.4.2.1 | 1 |
lineage4.2.1 | 2 |
lineage4.8 | 32 |
lineage1.1.3.1 | 3 |
lineage4.1.2.1 | 7 |
lineage4.4.1.1 | 2 |
lineage4.3.2 | 2 |
lineage3.1.2 | 3 |
lineage3.1.3 | 2 |
lineage4.1.1 | 3 |
lineage4 | 4 |
2 | |
lineage3.1.1 | 1 |
lineage4.2.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.1.1 | 1 |
lineage1.2.2.2 | 1 |
lineage1.1.2 | 1 |
lineage4.3.3 | 2 |
lineage4.9 | 1 |
lineage2.2.1.1 | 1 |
lineage4.5 | 1 |
La1.2 | 1 |
La1.8.1 | 1 |
lineage1.2.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 114 |
ID | Drug resistance | Lineage | Country iso2 | SRR2099936 | RR-TB | lineage4.8.2 | None | SRR18910193 | HR-TB | lineage2.2 | None | SRR19318156 | Sensitive | lineage4.3.4.1 | None | SRR21735256 | Other | lineage1 | None | SRR2100849 | HR-TB | lineage3 | None | SRR21657207 | Sensitive | lineage2.2.1 | None | ERR4815762 | Sensitive | lineage4.3.4.2.1 | gb | SRR23861798 | Sensitive | lineage4.2.1 | None | ERR2229577 | Sensitive | lineage4.8 | None | SRR6650119 | Sensitive | lineage1.1.3.1 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR4814442 | Other | lineage4.4.1.1 | None | ERR4814576 | Sensitive | lineage4.8 | gb | ERR4815456 | Sensitive | lineage3 | None | ERR4815324 | Sensitive | lineage4.3.2 | None | ERR4815353 | Sensitive | lineage3.1.2 | gb | ERR4814437 | Other | lineage4.1.2.1 | None | ERR4815436 | Sensitive | lineage4.8 | None | ERR4815001 | Sensitive | lineage3.1.3 | None | ERR4815507 | Sensitive | lineage4.1.1 | gb | ERR4816218 | HR-TB | lineage3 | gb | ERR2229543 | Other | lineage4.8 | dk | ERR2229010 | Sensitive | lineage4 | None | ERR4817088 | Other | lineage3.1.2 | None | ERR2229134 | HR-TB | lineage4.8 | None | ERR2229588 | Sensitive | lineage4.8 | None | ERR2229599 | Sensitive | lineage4.8 | None | ERR2229180 | Other | lineage4 | None | ERR2229614 | Sensitive | lineage4.8 | None | ERR2229607 | HR-TB | lineage4.8 | None | ERR2229175 | Other | lineage4.8 | None | ERR2229208 | Sensitive | lineage4.8 | None | ERR2229766 | Sensitive | lineage4.8 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR2229219 | Sensitive | lineage4.8 | None | ERR2229246 | Sensitive | lineage4.8 | None | ERR2229291 | Sensitive | lineage4.8 | None | ERR2229300 | Sensitive | lineage4.8 | None | ERR2229320 | Sensitive | lineage4.8 | None | ERR4816597 | Sensitive | None | ERR2229765 | Sensitive | lineage4.8 | dk | ERR2245304 | Sensitive | lineage3.1.1 | no | ERR2229659 | Sensitive | lineage4.8 | None | ERR2229379 | HR-TB | lineage4.8 | None | ERR2229389 | RR-TB | lineage4 | None | ERR2229405 | Sensitive | lineage4 | None | ERR2229465 | Sensitive | lineage4.8 | dk | ERR2229795 | Sensitive | lineage4.8 | None | ERR2229477 | Sensitive | lineage4.8 | None | ERR2229487 | Sensitive | lineage4.8 | None | ERR2229376 | Other | lineage4.8 | None | ERR2229683 | Sensitive | lineage4.8 | dk | ERR2229414 | Sensitive | lineage4.8 | None | ERR2229418 | Sensitive | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR2229447 | Sensitive | lineage4.8 | None | ERR2229497 | Sensitive | lineage4.8 | None | ERR4817798 | Sensitive | lineage4.1.1 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818739 | Sensitive | lineage3 | gb | ERR4818024 | Sensitive | lineage3 | gb | ERR2512923 | Sensitive | lineage3 | None | ERR2513306 | Sensitive | lineage4.1.2.1 | None | ERR2512892 | Sensitive | lineage4.1.2.1 | None | ERR4818619 | Sensitive | lineage3 | None | ERR4817607 | Sensitive | lineage4.2.1.1 | gb | ERR4819154 | Sensitive | lineage4.1.1.3 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR2514056 | Sensitive | lineage4.3.2 | gb | ERR4819207 | Sensitive | lineage3 | None | ERR4819319 | Sensitive | lineage4.1.1 | None | ERR2514230 | Sensitive | lineage3.1.3 | gb | ERR4819734 | RR-TB | lineage3 | gb | ERR4820650 | Sensitive | lineage2.2.1 | None | ERR4819786 | Sensitive | lineage2.2.1 | None | ERR4819991 | Sensitive | lineage3 | gb | ERR4821054 | Other | lineage3 | None | SRR6045432 | Other | lineage3 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | ERR270747 | HR-TB | lineage3 | None | SRR6045474 | HR-TB | lineage2.2.1 | None | SRR6046604 | Sensitive | lineage2.2.1 | None | ERR4821154 | Other | lineage2.2.1 | gb | SRR6045744 | Other | lineage3.1.2 | None | SRR6044817 | Other | lineage3 | None | SRR6046556 | HR-TB | lineage1.2.2.2 | None | ERR4821584 | Other | lineage4.8.2 | None | ERR4821631 | Other | lineage1.1.2 | None | SRR6785243 | HR-TB | lineage4.3.3 | None | SRR6257043 | MDR-TB | lineage2.2.1 | None | ERR9117699 | Other | lineage4.1.2.1 | None | SRR6785547 | Sensitive | lineage4.2.1 | None | ERR3803978 | Sensitive | lineage2.2.1 | None | ERR4028196 | Sensitive | lineage4.9 | None | SRR6789617 | RR-TB | lineage2.2.1 | None | ERR5865748 | MDR-TB | lineage2.2.1 | None | SRR11972165 | MDR-TB | lineage2.2.1.1 | None | SRR10272564 | Sensitive | lineage4.4.1.1 | None | SRR1002689 | MDR-TB | lineage2.2.1 | None | SRR10272567 | Sensitive | lineage4.3.3 | None | SRR11972260 | HR-TB | lineage2.2.1 | None | SRR11972159 | MDR-TB | lineage2.2.1 | None | SRR11972213 | Sensitive | lineage1.1.3.1 | None | SRR11972312 | MDR-TB | lineage2.2.1 | None | SRR11972384 | Sensitive | lineage2.2.1 | None | SRR11972324 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972320 | Sensitive | lineage4.5 | None | SRR11972431 | Sensitive | lineage1.1.3.1 | None | SRR13986568 | Other | La1.2 | None | SRR1657063 | Other | La1.8.1 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR12199393 | Sensitive | lineage1.2.1.2.1 | None | SRR12199418 | Sensitive | lineage2.2.1 | None | SRR12199479 | Sensitive | None |
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