Rv1918c - c.2748G>C


Drug resistance types
115 Sensitive 12 RR-TB 22 HR-TB 18 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.1.2.1 13
lineage4.1.1 1
lineage3 13
lineage4.3.3 7
lineage4.8 86
lineage4.2.1 1
lineage4.1.2 2
lineage4 10
5
lineage1.1.2 3
lineage4.3.1 1
lineage1.2.1.2.1 1
lineage3.1.1 2
lineage4.9 4
lineage2.2.1.1 3
lineage1.1.1.1 2
lineage2.2.1 22
lineage4.3.2.1 2
lineage4.3.4.2 1
lineage4.4.1.1 3
lineage4.2.1.1 2
lineage2.2 5
lineage4.3.4.2.1 2
lineage4.4.1.1;lineage4.1.1.3 1
lineage4.9.1 1
lineage4.3 1
lineage4.1.3 1
lineage2.2.2 1
lineage1.1.3 1
lineage1.1.3.1 1
lineage1.1.1 1
La1.7 1
spoligotype Counts
spoligotype Count
None 200
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18337411 Sensitive lineage4.1.2.1 None
SRR16100711 Sensitive lineage4.1.1 None
SRR24466761 Sensitive lineage4.1.2.1 None
SRR18910161 Sensitive lineage3 None
SRR25395655 Sensitive lineage4.1.2.1 None
SRR21686103 Sensitive lineage4.3.3 None
ERR2228852 Sensitive lineage4.8 dk
ERR2229308 Sensitive lineage4.8 dk
ERR2229763 Sensitive lineage4.8 dk
ERR2229352 Sensitive lineage4.8 dk
ERR4814439 Sensitive lineage4.2.1 None
ERR2228927 Sensitive lineage4.8 dk
ERR3148147 RR-TB lineage4.1.2 None
ERR2229622 Sensitive lineage4.8 dk
ERR2229244 Sensitive lineage4.8 dk
ERR4815464 Sensitive lineage4.1.2.1 None
ERR4815071 Sensitive lineage3 None
ERR2229102 Sensitive lineage4.8 dk
SRR3675272 HR-TB lineage3 None
ERR2229540 Other lineage4.8 None
ERR2229539 Sensitive lineage4.8 None
ERR2229544 Sensitive lineage4.8 None
ERR2228942 Sensitive lineage4.8 None
ERR2229541 Other lineage4.8 None
ERR2228970 RR-TB lineage4.8 None
ERR2229546 Other lineage4.8 None
ERR2228999 Sensitive lineage4.8 None
ERR2229005 Sensitive lineage4.8 None
ERR2229002 Sensitive lineage4 None
ERR2229028 Sensitive lineage4.8 None
ERR2229554 Other lineage4.8 None
ERR2229551 Sensitive lineage4.8 None
ERR2229557 HR-TB lineage4.8 None
ERR1950047 Sensitive lineage4.8 None
ERR2229547 Sensitive lineage4.8 None
ERR2229086 Sensitive lineage4.8 None
ERR2229563 Sensitive lineage4.8 None
ERR2229092 Other lineage4.8 None
ERR2229091 Sensitive lineage4.8 None
ERR2229096 Sensitive lineage4 None
ERR2229107 Sensitive lineage4 None
ERR2229103 Sensitive lineage4.8 None
ERR2229574 Sensitive lineage4.8 None
ERR2229748 RR-TB lineage4 None
ERR2229110 Sensitive lineage4.8 None
ERR2229119 Sensitive lineage4.8 None
ERR2229134 HR-TB lineage4.8 None
ERR2229129 Other lineage4.8 None
ERR2229182 Sensitive lineage4.8 None
ERR2229139 Sensitive lineage4.8 None
ERR2229587 Sensitive lineage4.8 None
ERR2229169 HR-TB lineage4.8 None
ERR2229146 Sensitive lineage4.8 None
ERR2229153 Sensitive lineage4.8 None
ERR2229158 Sensitive lineage4 None
ERR2229162 Sensitive lineage4.8 None
ERR2229173 Sensitive lineage4.8 None
ERR2229200 Sensitive lineage4.8 None
ERR2229605 Sensitive lineage4.8 None
ERR2229206 Sensitive lineage4.8 None
ERR2229630 Sensitive lineage4.8 None
ERR2229617 Sensitive lineage4.8 None
SRR3732645 MDR-TB lineage4.3.3 None
ERR2229232 HR-TB lineage4.8 None
ERR2229211 Sensitive lineage4.8 None
ERR2229294 Other lineage4.8 None
ERR2229632 Sensitive lineage4.8 None
ERR2229313 Sensitive lineage4.8 None
ERR4816592 Other lineage4.1.2.1 None
ERR2229293 Sensitive lineage4.8 None
ERR2229338 Sensitive lineage4.8 None
ERR2229321 Other lineage4.8 None
ERR2229332 RR-TB lineage4.8 None
ERR2229657 Sensitive lineage4.8 None
ERR2229655 Other lineage4.8 None
ERR2229370 Sensitive lineage4.8 None
ERR2229363 Sensitive lineage4.8 None
ERR4816690 Other None
ERR2229374 Sensitive lineage4.8 None
ERR2229389 RR-TB lineage4 None
ERR2229379 HR-TB lineage4.8 None
ERR2229388 Sensitive lineage4 None
ERR2229385 Other lineage4.8 None
ERR2229407 Sensitive lineage4 None
ERR2229399 Sensitive lineage4.8 None
ERR2229685 Other lineage4.8 None
ERR2229392 Sensitive lineage4.8 None
ERR2229698 RR-TB lineage4.8 None
ERR2229406 Other lineage4.8 None
ERR2229429 HR-TB lineage4.8 None
ERR2229701 Sensitive lineage4.8 None
ERR2229440 Sensitive lineage4.8 None
ERR2229447 Sensitive lineage4.8 None
ERR2229451 Sensitive lineage4.8 None
ERR2229438 Sensitive lineage4.8 None
ERR2229492 Sensitive lineage4.8 None
ERR2229462 Other lineage4.8 None
ERR2229709 HR-TB lineage4.8 None
ERR2229506 Sensitive lineage4.8 None
ERR2229505 Other lineage4.8 None
ERR2229500 Sensitive lineage4.8 None
ERR2229497 Sensitive lineage4.8 None
ERR2228868 Sensitive lineage4.8 None
ERR2229724 Other lineage4 None
ERR2512972 Other lineage1.1.2 None
ERR2228905 Sensitive lineage4.8 None
ERR2229737 HR-TB lineage4.8 None
ERR4817789 Sensitive lineage4.3.1 None
ERR4818544 Other lineage1.2.1.2.1 None
ERR4818387 Sensitive lineage4.1.2.1 None
ERR4818825 HR-TB lineage4.1.2.1 None
ERR2512801 Sensitive lineage3 None
ERR4818949 Sensitive lineage3.1.1 None
ERR4817633 Sensitive lineage4.9 None
ERR4818631 RR-TB lineage4 None
ERR4819138 Sensitive lineage4.1.2.1 None
ERR4820697 Sensitive lineage2.2.1.1 None
ERR2513743 Other lineage4.1.2 None
ERR4820245 Sensitive lineage3.1.1 None
ERR4820266 RR-TB lineage3 None
ERR4819378 Other lineage4.8 None
ERR2513862 HR-TB lineage4.9 None
ERR4819722 Sensitive lineage4.1.2.1 None
ERR2514197 RR-TB lineage1.1.1.1 None
ERR2514157 HR-TB lineage2.2.1 None
ERR4820650 Sensitive lineage2.2.1 None
ERR4819871 Sensitive lineage4.8 None
ERR2514841 Sensitive lineage3 None
ERR2514862 Sensitive lineage4.3.2.1 None
SRR5481426 Other lineage4.3.4.2 None
ERR2659169 Sensitive None
ERR2659167 Sensitive None
ERR4821112 Sensitive lineage4.1.2.1 None
ERR2660502 Sensitive lineage4.3.2.1 None
ERR4821161 Sensitive lineage3 None
ERR4821362 Sensitive lineage2.2.1 None
ERR4822015 Sensitive lineage4.4.1.1 None
ERR4827437 Pre-XDR-TB lineage2.2.1 None
ERR4827905 MDR-TB lineage2.2.1 None
ERR4827434 HR-TB lineage2.2.1 None
SRR6046778 Sensitive lineage4.9 None
ERR4827458 HR-TB lineage4.3.3 None
ERR4828349 Sensitive lineage1.1.1.1 None
SRR6785205 Sensitive lineage4.3.3 None
SRR6257044 MDR-TB lineage2.2.1 None
SRR6257064 Sensitive lineage4.3.3 None
SRR6257063 HR-TB lineage4.2.1.1 None
SRR6397642 RR-TB None
SRR6256983 MDR-TB lineage2.2.1 None
SRR6257061 MDR-TB lineage2.2.1 None
SRR6257065 HR-TB lineage2.2.1 None
SRR6257069 MDR-TB lineage2.2 None
SRR6785327 Sensitive lineage2.2.1 None
ERR2510682 Pre-XDR-TB lineage2.2.1 it
SRR6785330 Other lineage2.2.1 None
SRR6785354 MDR-TB lineage4.3.4.2.1 None
ERR4816957 Sensitive lineage3 gb
SRR8420473 Sensitive lineage4.4.1.1 None
ERR11465808 Sensitive lineage4.4.1.1;lineage4.1.1.3 None
ERR4132440 Sensitive lineage2.2.1 None
SRR998860 MDR-TB lineage2.2.1 None
ERR11465189 RR-TB lineage4.9.1 None
ERR11465654 Sensitive lineage4.1.2.1 None
ERR3588243 Sensitive lineage4.3 None
ERR11465168 Sensitive lineage4.1.2.1 None
ERR4028200 Other lineage4.9 None
ERR2513655 Sensitive lineage4.3.4.2.1 gb
ERR2514075 MDR-TB lineage3 gb
ERR9285885 Sensitive lineage4.4.1.1 None
ERR2514069 Sensitive lineage2.2.1 gb
ERR2513742 Pre-XDR-TB lineage4.8 gb
ERR7975685 MDR-TB lineage4.1.2.1 None
SRR1002685 HR-TB lineage4.3.3 None
ERR9786998 HR-TB lineage4.1.3 None
ERR983233 MDR-TB lineage2.2.1.1 None
SRR1002701 Sensitive lineage4.3.3 None
SRR1002690 MDR-TB lineage2.2.1 None
SRR1002694 MDR-TB lineage2.2 None
SRR1002700 HR-TB lineage2.2.1 None
SRR1002697 HR-TB lineage4.2.1.1 None
SRR11972327 Pre-XDR-TB lineage2.2.1 None
SRR11972171 RR-TB lineage2.2.2 None
SRR11972199 Sensitive None
SRR11972236 Sensitive lineage1.1.3 None
SRR11972256 Pre-XDR-TB lineage2.2.1 None
SRR11972158 MDR-TB lineage2.2 None
SRR11972157 MDR-TB lineage2.2.1 None
SRR11972169 HR-TB lineage2.2 None
SRR11972375 Sensitive lineage1.1.2 None
SRR12199426 Sensitive lineage1.1.3.1 None
SRR11972449 MDR-TB lineage2.2 None
SRR11972458 Sensitive lineage1.1.2 None
SRR12199469 Sensitive lineage1.1.1 None
SRR12199460 HR-TB lineage2.2.1.1 None
SRR13986560 Other La1.7 None
SRR14088371 MDR-TB lineage3 None
SRR14088350 Pre-XDR-TB lineage3 None
SRR14088375 MDR-TB lineage3 None
SRR14088377 Pre-XDR-TB lineage3 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None