Rv1918c - c.2748G>C
Drug resistance types
132 Sensitive
11 RR-TB
26 HR-TB
20 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1 | 3 |
| lineage4.3.3 | 7 |
| lineage4.1.2.1 | 9 |
| lineage3 | 15 |
| lineage1.2.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.8 | 106 |
| lineage4.1.2 | 2 |
| lineage4 | 10 |
| 5 | |
| lineage3.1.1 | 4 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.3.1 | 1 |
| lineage2.2.1 | 23 |
| lineage4.9 | 4 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.1.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.2.1.1 | 2 |
| lineage2.2 | 5 |
| lineage4.3 | 1 |
| lineage4.1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.1 | 1 |
| La1.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 222 |
Geographic prevalence
Country level data for this variant is available for 42 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16100711 | Sensitive | lineage4.1.1 | None | SRR21686103 | Sensitive | lineage4.3.3 | None | SRR18337411 | Sensitive | lineage4.1.2.1 | None | SRR18910161 | Sensitive | lineage3 | None | ERR4815464 | Sensitive | lineage4.1.2.1 | None | ERR4815247 | Sensitive | lineage1.2.2.1 | gb | ERR4814439 | Sensitive | lineage4.2.1 | None | ERR2228942 | Sensitive | lineage4.8 | None | ERR3148147 | RR-TB | lineage4.1.2 | None | SRR3675272 | HR-TB | lineage3 | None | ERR4815071 | Sensitive | lineage3 | None | ERR2229539 | Sensitive | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR2229544 | Sensitive | lineage4.8 | None | ERR2229541 | Other | lineage4.8 | None | ERR2228999 | Sensitive | lineage4.8 | None | ERR2228970 | RR-TB | lineage4.8 | None | ERR2229546 | Other | lineage4.8 | None | ERR4816957 | Sensitive | lineage3 | gb | ERR2229005 | Sensitive | lineage4.8 | None | ERR2228971 | Sensitive | lineage4.8 | dk | ERR2229002 | Sensitive | lineage4 | None | ERR2229557 | HR-TB | lineage4.8 | None | ERR2229554 | Other | lineage4.8 | None | ERR2229028 | Sensitive | lineage4.8 | None | ERR2229551 | Sensitive | lineage4.8 | None | ERR1950047 | Sensitive | lineage4.8 | None | ERR2229547 | Sensitive | lineage4.8 | None | ERR2229107 | Sensitive | lineage4 | None | ERR2229563 | Sensitive | lineage4.8 | None | ERR2229086 | Sensitive | lineage4.8 | None | ERR2229092 | Other | lineage4.8 | None | ERR2229096 | Sensitive | lineage4 | None | ERR2229103 | Sensitive | lineage4.8 | None | ERR2229091 | Sensitive | lineage4.8 | None | ERR2229102 | Sensitive | lineage4.8 | dk | ERR2229574 | Sensitive | lineage4.8 | None | ERR2229119 | Sensitive | lineage4.8 | None | ERR2229110 | Sensitive | lineage4.8 | None | ERR2229182 | Sensitive | lineage4.8 | None | ERR2229129 | Other | lineage4.8 | None | ERR2229134 | HR-TB | lineage4.8 | None | ERR2229146 | Sensitive | lineage4.8 | None | ERR2229587 | Sensitive | lineage4.8 | None | ERR2229158 | Sensitive | lineage4 | None | ERR2229169 | HR-TB | lineage4.8 | None | ERR2229748 | RR-TB | lineage4 | None | ERR2229139 | Sensitive | lineage4.8 | None | ERR2229153 | Sensitive | lineage4.8 | None | ERR2229162 | Sensitive | lineage4.8 | None | ERR2229173 | Sensitive | lineage4.8 | None | ERR2229200 | Sensitive | lineage4.8 | None | ERR2229605 | Sensitive | lineage4.8 | None | ERR2229211 | Sensitive | lineage4.8 | None | ERR2229206 | Sensitive | lineage4.8 | None | ERR2229763 | Sensitive | lineage4.8 | dk | ERR2229617 | Sensitive | lineage4.8 | None | SRR3732645 | MDR-TB | lineage4.3.3 | None | ERR2229232 | HR-TB | lineage4.8 | None | ERR2229630 | Sensitive | lineage4.8 | None | ERR2229622 | Sensitive | lineage4.8 | dk | ERR2229244 | Sensitive | lineage4.8 | dk | ERR2229293 | Sensitive | lineage4.8 | None | ERR2513742 | Pre-XDR-TB | lineage4.8 | gb | ERR2229262 | Sensitive | lineage4.8 | dk | ERR2229626 | Sensitive | lineage4.8 | dk | ERR2229294 | Other | lineage4.8 | None | ERR2229632 | Sensitive | lineage4.8 | None | ERR2229767 | Sensitive | lineage4.8 | dk | ERR2229308 | Sensitive | lineage4.8 | dk | ERR4816592 | Other | lineage4.1.2.1 | None | ERR2229333 | HR-TB | lineage4.8 | dk | ERR2229655 | Other | lineage4.8 | None | ERR2229318 | Sensitive | lineage4.8 | dk | ERR2229330 | Sensitive | lineage4.8 | dk | ERR2229313 | Sensitive | lineage4.8 | None | ERR2229321 | Other | lineage4.8 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR2229657 | Sensitive | lineage4.8 | None | ERR2229363 | Sensitive | lineage4.8 | None | ERR2229338 | Sensitive | lineage4.8 | None | ERR2229344 | Sensitive | lineage4.8 | dk | ERR2229352 | Sensitive | lineage4.8 | dk | ERR2229379 | HR-TB | lineage4.8 | None | ERR2229374 | Sensitive | lineage4.8 | None | ERR2229354 | Sensitive | lineage4.8 | dk | ERR4816690 | Other | None | ERR2229373 | Sensitive | lineage4.8 | dk | ERR2229370 | Sensitive | lineage4.8 | None | ERR2229388 | Sensitive | lineage4 | None | ERR2229685 | Other | lineage4.8 | None | ERR2229389 | RR-TB | lineage4 | None | ERR2229385 | Other | lineage4.8 | None | ERR2229406 | Other | lineage4.8 | None | ERR2229399 | Sensitive | lineage4.8 | None | ERR2229392 | Sensitive | lineage4.8 | None | ERR2229407 | Sensitive | lineage4 | None | ERR2229438 | Sensitive | lineage4.8 | None | ERR2229426 | HR-TB | lineage4.8 | dk | ERR2229701 | Sensitive | lineage4.8 | None | ERR2229430 | Sensitive | lineage4.8 | dk | ERR2229698 | RR-TB | lineage4.8 | None | ERR2229447 | Sensitive | lineage4.8 | None | ERR2229429 | HR-TB | lineage4.8 | None | ERR2229440 | Sensitive | lineage4.8 | None | ERR2245277 | HR-TB | lineage3.1.1 | no | ERR2229462 | Other | lineage4.8 | None | ERR2229709 | HR-TB | lineage4.8 | None | ERR2229697 | Sensitive | lineage4.8 | dk | ERR2229451 | Sensitive | lineage4.8 | None | ERR2229488 | Sensitive | lineage4.8 | dk | ERR2229464 | Sensitive | lineage4.8 | dk | ERR2229492 | Sensitive | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | ERR2229506 | Sensitive | lineage4.8 | None | ERR2228841 | Sensitive | lineage4.8 | dk | ERR2228883 | Sensitive | lineage4.8 | dk | ERR2228852 | Sensitive | lineage4.8 | dk | ERR2229724 | Other | lineage4 | None | ERR2228843 | Sensitive | lineage4.8 | dk | ERR2229497 | Sensitive | lineage4.8 | None | ERR2229500 | Sensitive | lineage4.8 | None | ERR2228871 | Sensitive | lineage4.8 | dk | ERR2228868 | Sensitive | lineage4.8 | None | ERR4818544 | Other | lineage1.2.1.2.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR2228905 | Sensitive | lineage4.8 | None | ERR2229737 | HR-TB | lineage4.8 | None | ERR2228927 | Sensitive | lineage4.8 | dk | ERR2512972 | Other | lineage1.1.2 | None | ERR4817789 | Sensitive | lineage4.3.1 | None | ERR2510682 | Pre-XDR-TB | lineage2.2.1 | it | ERR4818387 | Sensitive | lineage4.1.2.1 | None | ERR4818949 | Sensitive | lineage3.1.1 | None | ERR4817633 | Sensitive | lineage4.9 | None | ERR4818631 | RR-TB | lineage4 | None | ERR2512801 | Sensitive | lineage3 | None | ERR4820697 | Sensitive | lineage2.2.1.1 | None | ERR4819138 | Sensitive | lineage4.1.2.1 | None | ERR2513655 | Sensitive | lineage4.3.4.2.1 | gb | ERR2513743 | Other | lineage4.1.2 | None | ERR4820245 | Sensitive | lineage3.1.1 | None | ERR2514197 | RR-TB | lineage1.1.1.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513862 | HR-TB | lineage4.9 | None | ERR2514069 | Sensitive | lineage2.2.1 | gb | ERR2514075 | MDR-TB | lineage3 | gb | ERR2514157 | HR-TB | lineage2.2.1 | None | ERR2514068 | Sensitive | lineage3 | gb | ERR4819378 | Other | lineage4.8 | None | ERR2514415 | Sensitive | lineage4.1.1 | gb | ERR2514218 | Sensitive | lineage4.1.1 | gb | ERR2514841 | Sensitive | lineage3 | None | ERR4819722 | Sensitive | lineage4.1.2.1 | None | ERR4819871 | Sensitive | lineage4.8 | None | ERR2514862 | Sensitive | lineage4.3.2.1 | None | ERR4821112 | Sensitive | lineage4.1.2.1 | None | ERR4820650 | Sensitive | lineage2.2.1 | None | SRR5481426 | Other | lineage4.3.4.2 | None | ERR2659167 | Sensitive | None | SRR6045545 | HR-TB | lineage4.8 | gb | ERR2659169 | Sensitive | None | ERR4821161 | Sensitive | lineage3 | None | ERR2660502 | Sensitive | lineage4.3.2.1 | None | ERR4821362 | Sensitive | lineage2.2.1 | None | ERR4822015 | Sensitive | lineage4.4.1.1 | None | ERR4827458 | HR-TB | lineage4.3.3 | None | ERR4827905 | MDR-TB | lineage2.2.1 | None | ERR4827437 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827434 | HR-TB | lineage2.2.1 | None | SRR6256983 | MDR-TB | lineage2.2.1 | None | ERR4830832 | MDR-TB | lineage3.1.1 | et | SRR6046652 | Sensitive | lineage3 | gb | ERR4828349 | Sensitive | lineage1.1.1.1 | None | SRR6046778 | Sensitive | lineage4.9 | None | SRR6397642 | RR-TB | None | SRR6257063 | HR-TB | lineage4.2.1.1 | None | SRR6257061 | MDR-TB | lineage2.2.1 | None | SRR6257044 | MDR-TB | lineage2.2.1 | None | SRR6257064 | Sensitive | lineage4.3.3 | None | SRR6257065 | HR-TB | lineage2.2.1 | None | SRR6785205 | Sensitive | lineage4.3.3 | None | SRR6257069 | MDR-TB | lineage2.2 | None | SRR6785327 | Sensitive | lineage2.2.1 | None | ERR4132440 | Sensitive | lineage2.2.1 | None | SRR6785354 | MDR-TB | lineage4.3.4.2.1 | None | ERR4831847 | MDR-TB | lineage2.2.1 | vn | SRR998860 | MDR-TB | lineage2.2.1 | None | SRR6785330 | Other | lineage2.2.1 | None | SRR8420473 | Sensitive | lineage4.4.1.1 | None | ERR3588243 | Sensitive | lineage4.3 | None | ERR4028200 | Other | lineage4.9 | None | ERR9786998 | HR-TB | lineage4.1.3 | None | ERR9285885 | Sensitive | lineage4.4.1.1 | None | ERR7975685 | MDR-TB | lineage4.1.2.1 | None | SRR1002685 | HR-TB | lineage4.3.3 | None | ERR983233 | MDR-TB | lineage2.2.1.1 | None | SRR1002700 | HR-TB | lineage2.2.1 | None | SRR1002701 | Sensitive | lineage4.3.3 | None | SRR1002690 | MDR-TB | lineage2.2.1 | None | SRR1002697 | HR-TB | lineage4.2.1.1 | None | SRR11972171 | RR-TB | lineage2.2.2 | None | SRR1002694 | MDR-TB | lineage2.2 | None | SRR11972158 | MDR-TB | lineage2.2 | None | SRR11972157 | MDR-TB | lineage2.2.1 | None | SRR11972169 | HR-TB | lineage2.2 | None | SRR11972199 | Sensitive | None | SRR11972256 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972236 | Sensitive | lineage1.1.3 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972375 | Sensitive | lineage1.1.2 | None | SRR11972458 | Sensitive | lineage1.1.2 | None | SRR11972449 | MDR-TB | lineage2.2 | None | SRR12199426 | Sensitive | lineage1.1.3.1 | None | SRR12199469 | Sensitive | lineage1.1.1 | None | SRR12199460 | HR-TB | lineage2.2.1.1 | None | SRR14088377 | Pre-XDR-TB | lineage3 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR13986560 | Other | La1.7 | None | SRR14088350 | Pre-XDR-TB | lineage3 | None | SRR14088371 | MDR-TB | lineage3 | None | SRR14088375 | MDR-TB | lineage3 | None |
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