lineage | Count |
---|---|
lineage4.3.3 | 14 |
lineage3.1.1 | 5 |
lineage4.5 | 4 |
lineage4.1.2.1 | 34 |
lineage4.8 | 32 |
lineage4.7 | 4 |
lineage3.1.2.1 | 1 |
lineage4.4.1.1 | 2 |
lineage4.2.1.1 | 2 |
lineage4.3.4.2 | 2 |
lineage6.1.3 | 1 |
lineage1.2.1.2.1 | 2 |
lineage4.2.1 | 5 |
lineage2.2.1.1 | 2 |
lineage2.2.1 | 32 |
lineage4 | 2 |
lineage5.2 | 1 |
lineage3 | 5 |
lineage4.3.3;lineage3 | 1 |
lineage4.2.2 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1 | 2 |
lineage4.2.2.1 | 1 |
lineage4.9 | 1 |
lineage4.1.1.3 | 2 |
lineage4.3.4.1 | 4 |
La1.8.2 | 2 |
La1.2 | 1 |
lineage1.2.1.1 | 1 |
lineage4.6 | 1 |
lineage4.1 | 2 |
lineage4.3 | 1 |
lineage4.6.2.2 | 2 |
lineage4.3.2 | 2 |
lineage1.1.2 | 2 |
lineage4.4.1.1.1 | 1 |
lineage3.1.2 | 2 |
lineage3.1.3 | 1 |
lineage4.1.2 | 1 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 183 |
ID | Drug resistance | Lineage | Country iso2 | ERR4829817 | Sensitive | lineage4.3.3 | it | ERR11067289 | Sensitive | lineage3.1.1 | None | ERR4830764 | RR-TB | lineage4.5 | ir | ERR11067293 | Sensitive | lineage3.1.1 | None | ERR11067267 | HR-TB | lineage4.1.2.1 | None | ERR11067292 | Sensitive | lineage3.1.1 | None | ERR11067331 | Sensitive | lineage4.8 | None | ERR11067329 | HR-TB | lineage4.7 | None | ERR11067295 | Sensitive | lineage3.1.2.1 | None | ERR11067320 | Sensitive | lineage4.1.2.1 | None | ERR11067335 | Sensitive | lineage4.8 | None | ERR11067384 | Sensitive | lineage4.8 | None | ERR11067308 | Sensitive | lineage4.4.1.1 | None | ERR11067325 | Sensitive | lineage4.1.2.1 | None | ERR11067410 | Sensitive | lineage4.1.2.1 | None | ERR11067342 | Sensitive | lineage4.1.2.1 | None | ERR11067353 | Sensitive | lineage4.2.1.1 | None | ERR11067454 | Sensitive | lineage4.1.2.1 | None | ERR11067363 | Sensitive | lineage4.8 | None | ERR11067412 | Sensitive | lineage4.3.4.2 | None | ERR11067532 | Sensitive | lineage4.1.2.1 | None | ERR11067389 | Sensitive | lineage4.8 | None | ERR11067367 | Other | lineage6.1.3 | None | ERR11067547 | Sensitive | lineage1.2.1.2.1 | None | ERR11067469 | Sensitive | lineage4.1.2.1 | None | ERR11067505 | Sensitive | lineage4.4.1.1 | None | ERR11067461 | Sensitive | lineage4.8 | None | ERR11067508 | MDR-TB | lineage4.1.2.1 | None | ERR11067513 | Sensitive | lineage4.2.1 | None | ERR11067540 | Sensitive | lineage2.2.1.1 | None | ERR11067608 | Sensitive | lineage4.1.2.1 | None | ERR11067526 | Sensitive | lineage4.3.3 | None | ERR11067473 | HR-TB | lineage2.2.1 | None | ERR11067434 | MDR-TB | lineage4 | None | ERR11067485 | Sensitive | lineage4.1.2.1 | None | ERR11067527 | RR-TB | lineage5.2 | None | ERR11067484 | Sensitive | lineage4.8 | None | ERR11067588 | Sensitive | lineage3 | None | ERR11067529 | Sensitive | lineage4.3.3;lineage3 | None | ERR11067587 | Sensitive | lineage4.2.2 | None | ERR11067500 | Sensitive | lineage4.1.2.1 | None | ERR11067496 | Sensitive | lineage4.2.2.2 | None | ERR10969116 | HR-TB | lineage4.1.1 | None | ERR11067541 | HR-TB | lineage4.3.3 | None | ERR11067531 | Sensitive | lineage4.2.2.1 | None | ERR10969245 | Sensitive | lineage4.8 | None | ERR10969125 | HR-TB | lineage4.9 | None | ERR10969181 | Sensitive | lineage4.1.2.1 | None | ERR10969193 | Sensitive | lineage4.3.4.2 | None | ERR10969231 | Sensitive | lineage4.1.1.3 | None | ERR10969230 | Sensitive | lineage4.3.3 | None | ERR10969131 | Sensitive | lineage4.3.4.1 | None | ERR10969165 | Sensitive | lineage4.1.2.1 | None | ERR10969167 | Sensitive | lineage4.3.3 | None | ERR10969216 | Sensitive | lineage4.8 | None | ERR10969240 | Sensitive | lineage4.3.4.1 | None | ERR10969250 | HR-TB | lineage4.3.3 | None | ERR10969243 | Sensitive | lineage4.1.1 | None | ERR4011053 | Sensitive | lineage2.2.1.1 | None | ERR11044563 | Sensitive | lineage3 | None | ERR11044547 | Sensitive | lineage4.1.1.3 | None | ERR4797163 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796930 | Pre-XDR-TB | lineage2.2.1 | in | ERR6149875 | Other | La1.8.2 | None | ERR7764379 | Sensitive | lineage4.3.3 | None | ERR6149874 | Other | La1.8.2 | None | ERR11067641 | MDR-TB | lineage2.2.1 | None | ERR6201843 | Other | La1.2 | None | ERR11050097 | Sensitive | lineage1.2.1.1 | None | ERR7911412 | MDR-TB | lineage2.2.1 | us | ERR11050031 | Sensitive | lineage4.6 | None | ERR11050484 | Sensitive | lineage4.3.3 | None | ERR11050193 | Sensitive | lineage4.1 | None | SRR10809111 | Sensitive | lineage4.3 | None | ERR11050383 | Sensitive | lineage2.2.1 | None | ERR11050386 | Other | lineage3 | None | ERR11050407 | HR-TB | lineage4.5 | None | SRR14782171 | Sensitive | lineage2.2.1 | None | SRR14781974 | HR-TB | lineage2.2.1 | None | SRR14781959 | MDR-TB | lineage2.2.1 | None | SRR14782570 | Pre-XDR-TB | lineage4.2.1 | None | SRR14782349 | Sensitive | lineage4.8 | None | SRR14782462 | Sensitive | lineage2.2.1 | None | SRR14801493 | Other | lineage2.2.1 | None | SRR14782663 | Sensitive | lineage2.2.1 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | SRR14782813 | Sensitive | lineage4.3.4.1 | None | SRR14801709 | MDR-TB | lineage4.2.1 | None | SRR14801926 | Sensitive | lineage2.2.1 | None | SRR16088451 | Sensitive | lineage4.3.3 | None | SRR14802142 | Sensitive | lineage2.2.1 | None | SRR14801923 | Sensitive | lineage4.1.2.1 | None | ERR11050607 | Sensitive | lineage4.8 | None | SRR18714844 | MDR-TB | lineage2.2.1 | None | ERR11050674 | Sensitive | lineage4.3.3 | None | SRR18714818 | Sensitive | lineage4.1.2.1 | None | SRR18714817 | HR-TB | lineage2.2.1 | None | SRR16156718 | Pre-XDR-TB | lineage4.3.3 | None | ERR11067736 | HR-TB | lineage4.1.2.1 | None | SRR18714850 | Sensitive | lineage4.8 | None | SRR18715470 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | ERR11050850 | Sensitive | lineage4.8 | None | ERR11067681 | Sensitive | lineage4.1.2.1 | None | ERR11067741 | Sensitive | lineage4.8 | None | SRR18715141 | Sensitive | lineage4.1.2.1 | None | SRR18715200 | Sensitive | lineage4.8 | None | ERR11050931 | MDR-TB | lineage4.1.2.1 | None | ERR11050946 | MDR-TB | lineage4.1.2.1 | None | ERR11067691 | Sensitive | lineage3.1.1 | None | ERR11067716 | Sensitive | lineage2.2.1 | None | ERR11067749 | Sensitive | lineage2.2.1 | None | ERR11067911 | Sensitive | lineage4.8 | None | ERR11067865 | Sensitive | lineage4.3.2 | None | ERR11067866 | Sensitive | lineage1.1.2 | None | ERR11067792 | Sensitive | lineage4.1.2.1 | None | ERR11067873 | Sensitive | lineage4.1.2.1 | None | ERR11067901 | Sensitive | lineage4.8 | None | ERR11067914 | Sensitive | lineage4.5 | None | ERR11067925 | Sensitive | lineage4.7 | None | ERR11067968 | Sensitive | lineage2.2.1 | None | ERR11067969 | HR-TB | lineage1.2.1.2.1 | None | ERR11068008 | Sensitive | lineage4.8 | None | ERR11067973 | HR-TB | lineage4.7 | None | ERR11068030 | Sensitive | lineage4.1.2.1 | None | ERR11068040 | HR-TB | lineage2.2.1 | None | ERR11068061 | Sensitive | lineage4.8 | None | ERR11068064 | Sensitive | lineage4.8 | None | ERR11068091 | Sensitive | lineage4.3.3 | None | ERR11068080 | Sensitive | lineage3 | None | ERR11068155 | Sensitive | lineage4.4.1.1.1 | None | ERR11068132 | Sensitive | lineage4.6.2.2 | None | ERR11068193 | Sensitive | lineage4.8 | None | ERR11068177 | Sensitive | lineage3.1.2 | None | ERR11068151 | MDR-TB | lineage4.7 | None | ERR11068168 | Sensitive | lineage3.1.3 | None | ERR11068213 | Sensitive | lineage4.8 | None | ERR11068227 | Sensitive | lineage3 | None | ERR11068219 | Sensitive | lineage3.1.1 | None | ERR11068241 | Sensitive | lineage4.8 | None | ERR11068221 | Sensitive | lineage4.1 | None | ERR11068228 | Sensitive | lineage4 | None | ERR11068258 | Sensitive | lineage4.1.2.1 | None | ERR11068371 | Sensitive | lineage4.1.2.1 | None | ERR11068373 | HR-TB | lineage2.2.1 | None | ERR11068400 | Sensitive | lineage4.1.2.1 | None | ERR11068624 | Sensitive | lineage4.8 | None | ERR11068429 | Sensitive | lineage4.1.2.1 | None | ERR11068834 | Sensitive | lineage4.1.2.1 | None | ERR11068856 | HR-TB | lineage2.2.1 | None | ERR11068902 | MDR-TB | lineage2.2.1 | None | SRR23861840 | Sensitive | lineage2.2.1 | None | SRR23861775 | MDR-TB | lineage2.2.1 | None | SRR23861788 | Other | lineage4.1.2.1 | None | SRR23861844 | Sensitive | lineage4.2.1 | None | SRR23861863 | Other | lineage4.8 | None | SRR23861855 | Sensitive | lineage4.8 | None | SRR23861866 | Sensitive | lineage4.1.2 | None | SRR23861872 | Sensitive | lineage2.2.1 | None | SRR23862144 | HR-TB | lineage4.2.1 | None | SRR23861904 | Other | lineage2.2.1 | None | SRR23861918 | Sensitive | lineage4.3.3 | None | SRR23861993 | Pre-XDR-TB | lineage2.2.1 | None | SRR23862029 | MDR-TB | lineage2.2.1 | None | SRR23862056 | Sensitive | lineage2.2.1 | None | SRR23862108 | Sensitive | lineage4.8 | None | SRR23862162 | Sensitive | lineage4.2.1.1 | None | SRR23862154 | Pre-XDR-TB | lineage2.2.1 | None | ERR11051009 | Sensitive | lineage4.8 | None | SRR23862168 | Sensitive | lineage4.3.3 | None | ERR11156388 | Sensitive | lineage4.8 | None | ERR11050964 | MDR-TB | lineage4.1.2.1 | None | ERR11051008 | Sensitive | lineage4.8 | None | ERR11050993 | Other | lineage1.1.2 | None | ERR11050995 | Sensitive | lineage4.5 | None | ERR11067138 | Sensitive | lineage4.8 | None | ERR11067143 | Sensitive | lineage4.4.2 | None | ERR11067142 | Other | lineage4.1.2.1 | None | ERR11067176 | Sensitive | lineage4.1.2.1 | None | ERR11067206 | Sensitive | lineage4.1.2.1 | None | ERR11067192 | Sensitive | lineage3.1.2 | None | ERR11067234 | Sensitive | lineage4.3.2 | None | ERR11067253 | MDR-TB | lineage4.8 | None |
---|